EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003284 (Gene tree)
Gene ID: 107102092
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC107102092
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11855 bases
Position: chrKL653701.1:65494-77348
Accession: 107102092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002216	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012083	-	4130	XM_015401264	ENSCVAP00000002216	993 (aa)	XP_015256750	UPI0007425337

Gene Model

Click here to download ENSCVAG00000003284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003284	-	54	55.370	ENSAPOG00000000444	-	91	55.351	Acanthochromis_polyacanthus
ENSCVAG00000003284	-	77	65.482	ENSATEG00000011040	-	99	55.326	Anabas_testudineus
ENSCVAG00000003284	-	81	54.345	ENSACLG00000001833	-	98	55.641	Astatotilapia_calliptera
ENSCVAG00000003284	-	52	53.462	ENSACLG00000001777	-	98	53.795	Astatotilapia_calliptera
ENSCVAG00000003284	-	75	64.250	ENSFHEG00000010603	-	98	62.689	Fundulus_heteroclitus
ENSCVAG00000003284	-	74	64.587	ENSFHEG00000010614	-	99	65.662	Fundulus_heteroclitus
ENSCVAG00000003284	-	80	68.944	ENSGAFG00000006087	-	99	68.696	Gambusia_affinis
ENSCVAG00000003284	-	72	56.146	ENSHBUG00000015375	-	98	56.274	Haplochromis_burtoni
ENSCVAG00000003284	-	81	53.602	ENSHBUG00000018072	-	91	53.602	Haplochromis_burtoni
ENSCVAG00000003284	-	99	56.551	ENSKMAG00000011735	-	99	56.551	Kryptolebias_marmoratus
ENSCVAG00000003284	-	90	53.631	ENSLBEG00000015796	-	97	53.084	Labrus_bergylta
ENSCVAG00000003284	-	79	48.696	ENSMAMG00000013245	-	70	47.971	Mastacembelus_armatus
ENSCVAG00000003284	-	54	55.556	ENSMZEG00005020584	-	99	55.556	Maylandia_zebra
ENSCVAG00000003284	-	57	57.703	ENSORLG00000026065	-	99	57.143	Oryzias_latipes
ENSCVAG00000003284	-	78	59.446	ENSORLG00020017362	-	89	59.057	Oryzias_latipes_hni
ENSCVAG00000003284	-	64	55.759	ENSOMEG00000018335	-	95	53.146	Oryzias_melastigma
ENSCVAG00000003284	-	53	51.747	ENSOMEG00000018412	-	94	55.556	Oryzias_melastigma
ENSCVAG00000003284	-	53	67.537	ENSPLAG00000023261	-	99	67.537	Poecilia_latipinna
ENSCVAG00000003284	-	80	67.995	ENSPMEG00000009099	-	99	67.995	Poecilia_mexicana
ENSCVAG00000003284	-	99	67.822	ENSPMEG00000009067	-	99	66.296	Poecilia_mexicana
ENSCVAG00000003284	-	94	68.159	ENSPREG00000006740	-	97	68.159	Poecilia_reticulata
ENSCVAG00000003284	-	91	51.341	ENSSMAG00000003569	-	70	52.283	Scophthalmus_maximus
ENSCVAG00000003284	-	91	56.705	ENSSDUG00000001451	-	76	56.833	Seriola_dumerili
ENSCVAG00000003284	-	99	67.384	ENSXMAG00000028779	-	99	67.384	Xiphophorus_maculatus