EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003305 (Gene tree)
Gene ID: 107086587
Gene Symbol: npm3
Alias: cb581|fb75f02|sb:cb581|wu:fb75f02|zgc:113084
Full Name: nucleophosmin/nucleoplasmin 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1951 bases
Position: chrKL652657.1:688095-690045
Accession: 107086587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002236	Nucleoplasmin	PF03066.15	1.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012050	-	1147	XM_015377636	ENSCVAP00000002236	166 (aa)	XP_015233122	UPI00074256B3

Gene Model

Click here to download ENSCVAG00000003305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003305	npm3	87	38.621	ENSCVAG00000013016	npm1b	53	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003305	npm3	67	51.351	ENSG00000107833	NPM3	64	49.573	Homo_sapiens
ENSCVAG00000003305	npm3	100	74.096	ENSAPOG00000013083	npm3	77	80.769	Acanthochromis_polyacanthus
ENSCVAG00000003305	npm3	67	51.351	ENSAMEG00000017639	-	61	51.351	Ailuropoda_melanoleuca
ENSCVAG00000003305	npm3	63	45.283	ENSAMEG00000019414	-	64	41.071	Ailuropoda_melanoleuca
ENSCVAG00000003305	npm3	87	78.472	ENSACIG00000022586	npm3	68	80.531	Amphilophus_citrinellus
ENSCVAG00000003305	npm3	100	74.699	ENSAOCG00000009376	npm3	78	80.769	Amphiprion_ocellaris
ENSCVAG00000003305	npm3	100	74.699	ENSAPEG00000015863	npm3	78	80.769	Amphiprion_percula
ENSCVAG00000003305	npm3	100	74.096	ENSATEG00000022752	npm3	78	80.000	Anabas_testudineus
ENSCVAG00000003305	npm3	66	51.376	ENSAPLG00000010935	NPM3	67	50.000	Anas_platyrhynchos
ENSCVAG00000003305	npm3	99	45.455	ENSACAG00000011936	NPM3	75	46.032	Anolis_carolinensis
ENSCVAG00000003305	npm3	76	45.669	ENSANAG00000023832	-	54	47.009	Aotus_nancymaae
ENSCVAG00000003305	npm3	60	48.000	ENSANAG00000033290	-	64	44.545	Aotus_nancymaae
ENSCVAG00000003305	npm3	69	47.826	ENSANAG00000023070	-	75	46.281	Aotus_nancymaae
ENSCVAG00000003305	npm3	75	48.413	ENSANAG00000027082	-	69	48.413	Aotus_nancymaae
ENSCVAG00000003305	npm3	99	75.152	ENSACLG00000007854	npm3	78	80.769	Astatotilapia_calliptera
ENSCVAG00000003305	npm3	67	78.378	ENSAMXG00000039828	npm3	62	71.545	Astyanax_mexicanus
ENSCVAG00000003305	npm3	87	48.966	ENSBTAG00000016335	NPM3	65	49.573	Bos_taurus
ENSCVAG00000003305	npm3	66	52.294	ENSCJAG00000017650	NPM3	60	52.294	Callithrix_jacchus
ENSCVAG00000003305	npm3	88	47.260	ENSCAFG00000009919	NPM3	53	51.351	Canis_familiaris
ENSCVAG00000003305	npm3	88	47.260	ENSCAFG00020009185	NPM3	61	51.351	Canis_lupus_dingo
ENSCVAG00000003305	npm3	67	51.351	ENSCHIG00000024055	-	65	49.573	Capra_hircus
ENSCVAG00000003305	npm3	57	37.895	ENSCAPG00000016606	NPM3	57	38.202	Cavia_aperea
ENSCVAG00000003305	npm3	77	49.612	ENSCPOG00000006301	NPM3	64	53.153	Cavia_porcellus
ENSCVAG00000003305	npm3	72	50.000	ENSCCAG00000031043	-	69	48.413	Cebus_capucinus
ENSCVAG00000003305	npm3	100	40.588	ENSCCAG00000029457	-	52	48.837	Cebus_capucinus
ENSCVAG00000003305	npm3	67	51.351	ENSCATG00000013755	NPM3	64	49.573	Cercocebus_atys
ENSCVAG00000003305	npm3	67	51.351	ENSCSAG00000005509	NPM3	64	49.573	Chlorocebus_sabaeus
ENSCVAG00000003305	npm3	76	47.244	ENSCPBG00000003817	NPM3	78	46.457	Chrysemys_picta_bellii
ENSCVAG00000003305	npm3	67	51.351	ENSCANG00000020300	NPM3	64	49.573	Colobus_angolensis_palliatus
ENSCVAG00000003305	npm3	67	52.252	ENSCGRG00001013345	Npm3	61	53.211	Cricetulus_griseus_chok1gshd
ENSCVAG00000003305	npm3	63	53.333	ENSCGRG00000015351	Npm3	63	53.333	Cricetulus_griseus_crigri
ENSCVAG00000003305	npm3	99	67.456	ENSCSEG00000007944	npm3	80	77.612	Cynoglossus_semilaevis
ENSCVAG00000003305	npm3	99	67.273	ENSDARG00000103594	npm3	80	69.173	Danio_rerio
ENSCVAG00000003305	npm3	99	43.636	ENSDORG00000003491	Npm3	66	48.333	Dipodomys_ordii
ENSCVAG00000003305	npm3	67	49.550	ENSETEG00000006307	NPM3	64	47.863	Echinops_telfairi
ENSCVAG00000003305	npm3	67	51.351	ENSEASG00005008834	NPM3	61	51.351	Equus_asinus_asinus
ENSCVAG00000003305	npm3	67	51.351	ENSECAG00000007524	NPM3	61	51.351	Equus_caballus
ENSCVAG00000003305	npm3	78	72.932	ENSELUG00000021730	npm3	81	71.642	Esox_lucius
ENSCVAG00000003305	npm3	89	47.619	ENSFCAG00000007178	NPM3	61	50.450	Felis_catus
ENSCVAG00000003305	npm3	98	46.012	ENSFALG00000008586	NPM3	65	50.000	Ficedula_albicollis
ENSCVAG00000003305	npm3	78	83.846	ENSFHEG00000003983	npm3	81	82.308	Fundulus_heteroclitus
ENSCVAG00000003305	npm3	73	79.675	ENSGMOG00000004317	npm3	82	76.378	Gadus_morhua
ENSCVAG00000003305	npm3	64	52.336	ENSGALG00000032329	NPM3	70	51.402	Gallus_gallus
ENSCVAG00000003305	npm3	77	78.125	ENSGAFG00000009135	npm3	77	77.165	Gambusia_affinis
ENSCVAG00000003305	npm3	98	69.643	ENSGACG00000007294	npm3	74	76.923	Gasterosteus_aculeatus
ENSCVAG00000003305	npm3	61	50.000	ENSGAGG00000004081	NPM3	57	49.020	Gopherus_agassizii
ENSCVAG00000003305	npm3	67	51.351	ENSGGOG00000027500	NPM3	64	49.573	Gorilla_gorilla
ENSCVAG00000003305	npm3	99	75.758	ENSHBUG00000023704	npm3	79	80.769	Haplochromis_burtoni
ENSCVAG00000003305	npm3	77	48.837	ENSHGLG00000019118	NPM3	64	52.252	Heterocephalus_glaber_female
ENSCVAG00000003305	npm3	63	52.885	ENSHGLG00100010926	NPM3	79	52.885	Heterocephalus_glaber_male
ENSCVAG00000003305	npm3	78	72.868	ENSHCOG00000019322	npm3	78	68.421	Hippocampus_comes
ENSCVAG00000003305	npm3	99	68.675	ENSIPUG00000008204	npm3	83	72.388	Ictalurus_punctatus
ENSCVAG00000003305	npm3	67	51.351	ENSSTOG00000022621	NPM3	61	51.351	Ictidomys_tridecemlineatus
ENSCVAG00000003305	npm3	67	52.252	ENSJJAG00000018907	Npm3	61	52.252	Jaculus_jaculus
ENSCVAG00000003305	npm3	100	72.674	ENSKMAG00000020800	npm3	75	80.769	Kryptolebias_marmoratus
ENSCVAG00000003305	npm3	78	79.231	ENSLBEG00000015651	npm3	79	77.692	Labrus_bergylta
ENSCVAG00000003305	npm3	100	63.095	ENSLOCG00000000705	-	80	70.000	Lepisosteus_oculatus
ENSCVAG00000003305	npm3	71	50.000	ENSLAFG00000023022	NPM3	70	49.573	Loxodonta_africana
ENSCVAG00000003305	npm3	67	51.351	ENSMFAG00000041878	NPM3	64	49.573	Macaca_fascicularis
ENSCVAG00000003305	npm3	72	50.000	ENSMMUG00000015774	NPM3	64	49.573	Macaca_mulatta
ENSCVAG00000003305	npm3	67	51.351	ENSMNEG00000039999	NPM3	64	49.573	Macaca_nemestrina
ENSCVAG00000003305	npm3	67	51.351	ENSMLEG00000038129	NPM3	64	49.573	Mandrillus_leucophaeus
ENSCVAG00000003305	npm3	99	72.727	ENSMAMG00000002698	npm3	78	79.231	Mastacembelus_armatus
ENSCVAG00000003305	npm3	99	75.152	ENSMZEG00005003091	npm3	79	80.769	Maylandia_zebra
ENSCVAG00000003305	npm3	67	51.351	ENSMAUG00000015218	Npm3	65	49.573	Mesocricetus_auratus
ENSCVAG00000003305	npm3	77	48.062	ENSMICG00000044119	NPM3	61	51.351	Microcebus_murinus
ENSCVAG00000003305	npm3	66	50.909	ENSMOCG00000013601	Npm3	62	51.376	Microtus_ochrogaster
ENSCVAG00000003305	npm3	100	71.687	ENSMMOG00000010681	npm3	80	78.947	Mola_mola
ENSCVAG00000003305	npm3	91	46.358	ENSMODG00000011689	NPM3	64	51.304	Monodelphis_domestica
ENSCVAG00000003305	npm3	99	69.822	ENSMALG00000016787	npm3	76	77.692	Monopterus_albus
ENSCVAG00000003305	npm3	67	49.550	MGP_CAROLIEiJ_G0023020	Npm3	61	50.459	Mus_caroli
ENSCVAG00000003305	npm3	89	44.898	ENSMUSG00000056209	Npm3	61	49.541	Mus_musculus
ENSCVAG00000003305	npm3	77	46.512	MGP_PahariEiJ_G0014510	Npm3	61	50.459	Mus_pahari
ENSCVAG00000003305	npm3	89	45.578	MGP_SPRETEiJ_G0023941	Npm3	61	50.459	Mus_spretus
ENSCVAG00000003305	npm3	67	51.351	ENSMPUG00000016894	NPM3	61	51.351	Mustela_putorius_furo
ENSCVAG00000003305	npm3	67	50.450	ENSMLUG00000004961	NPM3	61	50.450	Myotis_lucifugus
ENSCVAG00000003305	npm3	69	51.304	ENSNGAG00000022833	-	64	51.304	Nannospalax_galili
ENSCVAG00000003305	npm3	75	49.194	ENSNGAG00000000155	-	68	49.565	Nannospalax_galili
ENSCVAG00000003305	npm3	88	45.946	ENSNLEG00000018637	-	64	47.863	Nomascus_leucogenys
ENSCVAG00000003305	npm3	67	51.351	ENSNLEG00000029281	-	64	49.573	Nomascus_leucogenys
ENSCVAG00000003305	npm3	51	45.882	ENSMEUG00000004931	-	80	48.718	Notamacropus_eugenii
ENSCVAG00000003305	npm3	61	45.098	ENSMEUG00000002619	-	100	45.098	Notamacropus_eugenii
ENSCVAG00000003305	npm3	66	55.046	ENSMEUG00000003465	-	80	53.982	Notamacropus_eugenii
ENSCVAG00000003305	npm3	88	48.630	ENSOPRG00000009229	NPM3	61	50.450	Ochotona_princeps
ENSCVAG00000003305	npm3	98	46.341	ENSODEG00000006704	NPM3	65	48.649	Octodon_degus
ENSCVAG00000003305	npm3	99	73.333	ENSONIG00000009513	npm3	79	80.769	Oreochromis_niloticus
ENSCVAG00000003305	npm3	67	51.351	ENSOCUG00000016819	NPM3	64	49.573	Oryctolagus_cuniculus
ENSCVAG00000003305	npm3	99	69.697	ENSORLG00000008492	npm3	95	71.533	Oryzias_latipes
ENSCVAG00000003305	npm3	99	69.697	ENSORLG00020002450	npm3	89	71.533	Oryzias_latipes_hni
ENSCVAG00000003305	npm3	99	69.697	ENSORLG00015006856	npm3	80	75.385	Oryzias_latipes_hsok
ENSCVAG00000003305	npm3	99	71.515	ENSOMEG00000002666	npm3	78	75.385	Oryzias_melastigma
ENSCVAG00000003305	npm3	77	48.837	ENSOGAG00000010001	NPM3	71	48.837	Otolemur_garnettii
ENSCVAG00000003305	npm3	67	51.351	ENSOARG00000016916	NPM3	65	49.573	Ovis_aries
ENSCVAG00000003305	npm3	67	51.351	ENSPPAG00000040517	NPM3	64	49.573	Pan_paniscus
ENSCVAG00000003305	npm3	89	47.619	ENSPPRG00000012611	-	61	50.450	Panthera_pardus
ENSCVAG00000003305	npm3	89	47.619	ENSPTIG00000005390	NPM3	61	50.450	Panthera_tigris_altaica
ENSCVAG00000003305	npm3	67	51.351	ENSPTRG00000002875	NPM3	64	49.573	Pan_troglodytes
ENSCVAG00000003305	npm3	67	51.351	ENSPANG00000021046	NPM3	64	49.573	Papio_anubis
ENSCVAG00000003305	npm3	98	53.704	ENSPKIG00000007609	npm3	67	57.480	Paramormyrops_kingsleyae
ENSCVAG00000003305	npm3	99	66.667	ENSPMGG00000020204	npm3	79	72.180	Periophthalmus_magnuspinnatus
ENSCVAG00000003305	npm3	92	46.753	ENSPEMG00000007731	Npm3	70	47.619	Peromyscus_maniculatus_bairdii
ENSCVAG00000003305	npm3	78	82.308	ENSPFOG00000014692	npm3	78	80.769	Poecilia_formosa
ENSCVAG00000003305	npm3	78	82.308	ENSPLAG00000009956	npm3	78	80.769	Poecilia_latipinna
ENSCVAG00000003305	npm3	68	80.870	ENSPMEG00000011795	npm3	69	83.962	Poecilia_mexicana
ENSCVAG00000003305	npm3	78	80.769	ENSPREG00000020765	npm3	78	79.231	Poecilia_reticulata
ENSCVAG00000003305	npm3	88	48.630	ENSPPYG00000002589	NPM3	55	49.573	Pongo_abelii
ENSCVAG00000003305	npm3	77	48.837	ENSPCOG00000014704	NPM3	71	48.837	Propithecus_coquereli
ENSCVAG00000003305	npm3	67	51.351	ENSPVAG00000004038	NPM3	64	49.573	Pteropus_vampyrus
ENSCVAG00000003305	npm3	99	75.758	ENSPNYG00000009300	npm3	79	81.538	Pundamilia_nyererei
ENSCVAG00000003305	npm3	99	67.273	ENSPNAG00000014779	npm3	84	71.111	Pygocentrus_nattereri
ENSCVAG00000003305	npm3	66	50.909	ENSRNOG00000017622	Npm3	61	51.376	Rattus_norvegicus
ENSCVAG00000003305	npm3	75	46.400	ENSRBIG00000042048	-	76	44.697	Rhinopithecus_bieti
ENSCVAG00000003305	npm3	67	51.351	ENSRBIG00000039086	-	64	49.573	Rhinopithecus_bieti
ENSCVAG00000003305	npm3	67	51.351	ENSRROG00000029912	NPM3	64	49.573	Rhinopithecus_roxellana
ENSCVAG00000003305	npm3	75	48.413	ENSSBOG00000027661	NPM3	72	48.413	Saimiri_boliviensis_boliviensis
ENSCVAG00000003305	npm3	69	50.435	ENSSHAG00000008567	NPM3	64	50.435	Sarcophilus_harrisii
ENSCVAG00000003305	npm3	99	61.818	ENSSFOG00015013651	npm3	82	71.429	Scleropages_formosus
ENSCVAG00000003305	npm3	99	70.122	ENSSMAG00000003907	npm3	79	78.295	Scophthalmus_maximus
ENSCVAG00000003305	npm3	100	72.289	ENSSDUG00000022843	npm3	78	78.462	Seriola_dumerili
ENSCVAG00000003305	npm3	100	71.084	ENSSLDG00000002811	npm3	78	78.462	Seriola_lalandi_dorsalis
ENSCVAG00000003305	npm3	87	45.517	ENSSPUG00000011875	NPM3	67	50.467	Sphenodon_punctatus
ENSCVAG00000003305	npm3	100	71.687	ENSSPAG00000002553	npm3	78	80.000	Stegastes_partitus
ENSCVAG00000003305	npm3	88	46.575	ENSSSCG00000010568	NPM3	65	47.863	Sus_scrofa
ENSCVAG00000003305	npm3	64	52.336	ENSTGUG00000009948	NPM3	79	49.533	Taeniopygia_guttata
ENSCVAG00000003305	npm3	100	72.289	ENSTRUG00000011661	npm3	80	80.769	Takifugu_rubripes
ENSCVAG00000003305	npm3	77	83.594	ENSTNIG00000016518	npm3	72	82.031	Tetraodon_nigroviridis
ENSCVAG00000003305	npm3	67	51.351	ENSVPAG00000003120	NPM3	65	49.573	Vicugna_pacos
ENSCVAG00000003305	npm3	88	47.260	ENSVVUG00000000945	NPM3	53	51.351	Vulpes_vulpes
ENSCVAG00000003305	npm3	94	45.665	ENSXETG00000014472	npm3	68	51.667	Xenopus_tropicalis
ENSCVAG00000003305	npm3	97	69.186	ENSXCOG00000012121	npm3	76	78.462	Xiphophorus_couchianus
ENSCVAG00000003305	npm3	97	69.186	ENSXMAG00000013473	npm3	76	78.462	Xiphophorus_maculatus