EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003346 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1059 bases
Position: chrKL652802.1:75385-76443
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002273	Transposase_22	PF02994.14	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012000	-	1059	-	ENSCVAP00000002273	352 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003346	-	59	30.189	ENSCVAG00000020967	-	76	30.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003346	-	100	79.944	ENSACIG00000018891	-	100	81.638	Amphilophus_citrinellus
ENSCVAG00000003346	-	82	31.615	ENSACIG00000013512	-	86	31.615	Amphilophus_citrinellus
ENSCVAG00000003346	-	94	79.880	ENSACIG00000014541	-	96	81.437	Amphilophus_citrinellus
ENSCVAG00000003346	-	86	33.028	ENSAPEG00000013155	-	97	33.028	Amphiprion_percula
ENSCVAG00000003346	-	86	32.919	ENSAPEG00000002130	-	97	32.919	Amphiprion_percula
ENSCVAG00000003346	-	81	33.447	ENSAPEG00000008945	-	98	33.447	Amphiprion_percula
ENSCVAG00000003346	-	82	31.544	ENSAPEG00000022657	-	78	31.544	Amphiprion_percula
ENSCVAG00000003346	-	51	35.165	ENSAPEG00000001697	-	53	35.165	Amphiprion_percula
ENSCVAG00000003346	-	81	33.447	ENSAPEG00000023573	-	98	33.447	Amphiprion_percula
ENSCVAG00000003346	-	67	30.833	ENSDARG00000109729	CABZ01073197.1	81	30.833	Danio_rerio
ENSCVAG00000003346	-	55	38.889	ENSFHEG00000006296	-	60	38.889	Fundulus_heteroclitus
ENSCVAG00000003346	-	91	73.602	ENSKMAG00000000253	-	89	73.602	Kryptolebias_marmoratus
ENSCVAG00000003346	-	76	40.741	ENSKMAG00000000861	-	98	40.741	Kryptolebias_marmoratus
ENSCVAG00000003346	-	71	31.373	ENSLACG00000002451	-	86	31.373	Latimeria_chalumnae
ENSCVAG00000003346	-	52	32.812	ENSLACG00000000643	-	78	32.812	Latimeria_chalumnae
ENSCVAG00000003346	-	61	31.481	ENSLACG00000009393	-	89	31.481	Latimeria_chalumnae
ENSCVAG00000003346	-	62	32.110	ENSLACG00000001384	-	98	32.110	Latimeria_chalumnae
ENSCVAG00000003346	-	52	32.065	ENSLACG00000000673	-	71	32.065	Latimeria_chalumnae
ENSCVAG00000003346	-	63	31.696	ENSLACG00000005266	-	72	31.696	Latimeria_chalumnae
ENSCVAG00000003346	-	53	33.158	ENSMZEG00005020773	-	63	33.158	Maylandia_zebra
ENSCVAG00000003346	-	63	47.534	ENSMZEG00005024824	-	71	47.534	Maylandia_zebra
ENSCVAG00000003346	-	62	35.000	ENSONIG00000020618	-	89	35.000	Oreochromis_niloticus
ENSCVAG00000003346	-	63	38.596	ENSONIG00000021329	-	97	38.596	Oreochromis_niloticus
ENSCVAG00000003346	-	80	50.709	ENSORLG00015021275	-	82	50.709	Oryzias_latipes_hsok
ENSCVAG00000003346	-	64	33.628	ENSOMEG00000019152	-	83	33.628	Oryzias_melastigma
ENSCVAG00000003346	-	55	31.343	ENSPKIG00000001458	-	77	31.343	Paramormyrops_kingsleyae
ENSCVAG00000003346	-	80	33.566	ENSPKIG00000009100	-	84	33.566	Paramormyrops_kingsleyae
ENSCVAG00000003346	-	59	39.623	ENSPMGG00000001874	-	70	39.623	Periophthalmus_magnuspinnatus
ENSCVAG00000003346	-	63	32.018	ENSPFOG00000020665	-	82	32.018	Poecilia_formosa
ENSCVAG00000003346	-	57	33.971	ENSPFOG00000020560	-	73	33.971	Poecilia_formosa
ENSCVAG00000003346	-	61	31.674	ENSPFOG00000020071	-	84	31.674	Poecilia_formosa
ENSCVAG00000003346	-	78	88.288	ENSPLAG00000016026	-	100	88.288	Poecilia_latipinna
ENSCVAG00000003346	-	61	35.981	ENSPMEG00000022872	-	67	35.981	Poecilia_mexicana
ENSCVAG00000003346	-	79	84.229	ENSPMEG00000021431	-	90	84.229	Poecilia_mexicana
ENSCVAG00000003346	-	62	31.193	ENSPMEG00000014224	-	74	31.193	Poecilia_mexicana
ENSCVAG00000003346	-	55	32.524	ENSPNAG00000017685	-	60	32.524	Pygocentrus_nattereri
ENSCVAG00000003346	-	98	86.994	ENSXMAG00000024802	-	100	86.994	Xiphophorus_maculatus
ENSCVAG00000003346	-	73	39.405	ENSXMAG00000023095	-	72	39.405	Xiphophorus_maculatus
ENSCVAG00000003346	-	97	84.751	ENSXMAG00000021250	-	95	84.751	Xiphophorus_maculatus
ENSCVAG00000003346	-	99	87.069	ENSXMAG00000026781	-	91	87.069	Xiphophorus_maculatus
ENSCVAG00000003346	-	64	39.474	ENSXMAG00000029285	-	77	39.474	Xiphophorus_maculatus