EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003357 (Gene tree)
Gene ID: 107103871
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15596 bases
Position: chrKL654050.1:85127-100722
Accession: 107103871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002280	DUF382	PF04037.13	1.6e-58	1	1
ENSCVAP00000021363	DUF382	PF04037.13	1.6e-58	1	1
ENSCVAP00000002280	SAP	PF02037.27	6.3e-09	1	1
ENSCVAP00000021363	SAP	PF02037.27	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011986	-	3028	-	ENSCVAP00000002280	843 (aa)	-	-
ENSCVAT00000011995	-	2931	XM_015403714	ENSCVAP00000021363	848 (aa)	XP_015259200	UPI000742B5E6

Gene Model

Click here to download ENSCVAG00000003357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003357	sf3b2	85	74.934	ENSG00000087365	SF3B2	99	90.159	Homo_sapiens
ENSCVAG00000003357	sf3b2	98	83.822	ENSAPOG00000001974	sf3b2	96	84.877	Acanthochromis_polyacanthus
ENSCVAG00000003357	sf3b2	85	73.568	ENSAMEG00000017206	SF3B2	84	71.822	Ailuropoda_melanoleuca
ENSCVAG00000003357	sf3b2	100	83.124	ENSACIG00000000624	sf3b2	100	83.352	Amphilophus_citrinellus
ENSCVAG00000003357	sf3b2	100	83.657	ENSAOCG00000009207	sf3b2	100	83.886	Amphiprion_ocellaris
ENSCVAG00000003357	sf3b2	100	83.543	ENSAPEG00000002762	sf3b2	97	84.114	Amphiprion_percula
ENSCVAG00000003357	sf3b2	97	57.805	ENSACAG00000008615	SF3B2	85	58.808	Anolis_carolinensis
ENSCVAG00000003357	sf3b2	85	74.801	ENSANAG00000029120	SF3B2	97	68.873	Aotus_nancymaae
ENSCVAG00000003357	sf3b2	100	83.908	ENSACLG00000014771	sf3b2	100	84.713	Astatotilapia_calliptera
ENSCVAG00000003357	sf3b2	100	73.696	ENSAMXG00000007929	sf3b2	93	76.341	Astyanax_mexicanus
ENSCVAG00000003357	sf3b2	85	73.403	ENSBTAG00000002778	SF3B2	84	71.654	Bos_taurus
ENSCVAG00000003357	sf3b2	64	50.179	WBGene00021004	sftb-2	89	49.541	Caenorhabditis_elegans
ENSCVAG00000003357	sf3b2	85	74.934	ENSCJAG00000001656	SF3B2	97	68.990	Callithrix_jacchus
ENSCVAG00000003357	sf3b2	85	73.664	ENSCAFG00000013033	SF3B2	84	71.916	Canis_familiaris
ENSCVAG00000003357	sf3b2	85	73.664	ENSCAFG00020015382	SF3B2	84	71.916	Canis_lupus_dingo
ENSCVAG00000003357	sf3b2	85	71.765	ENSCHIG00000011211	SF3B2	84	71.654	Capra_hircus
ENSCVAG00000003357	sf3b2	85	74.801	ENSTSYG00000000959	SF3B2	97	68.757	Carlito_syrichta
ENSCVAG00000003357	sf3b2	50	61.538	ENSCAPG00000006065	SF3B2	81	89.831	Cavia_aperea
ENSCVAG00000003357	sf3b2	76	72.985	ENSCPOG00000008294	SF3B2	97	66.452	Cavia_porcellus
ENSCVAG00000003357	sf3b2	85	74.934	ENSCCAG00000035256	SF3B2	97	68.990	Cebus_capucinus
ENSCVAG00000003357	sf3b2	97	67.586	ENSCATG00000042240	SF3B2	97	68.990	Cercocebus_atys
ENSCVAG00000003357	sf3b2	85	74.536	ENSCLAG00000016852	SF3B2	97	68.525	Chinchilla_lanigera
ENSCVAG00000003357	sf3b2	85	73.506	ENSCSAG00000008121	SF3B2	97	67.845	Chlorocebus_sabaeus
ENSCVAG00000003357	sf3b2	70	87.629	ENSCHOG00000001476	SF3B2	82	79.897	Choloepus_hoffmanni
ENSCVAG00000003357	sf3b2	86	74.150	ENSCPBG00000022465	SF3B2	94	74.014	Chrysemys_picta_bellii
ENSCVAG00000003357	sf3b2	62	67.742	ENSCING00000005665	-	84	66.856	Ciona_intestinalis
ENSCVAG00000003357	sf3b2	74	60.191	ENSCSAVG00000002029	-	84	66.352	Ciona_savignyi
ENSCVAG00000003357	sf3b2	85	74.934	ENSCANG00000039680	SF3B2	97	68.990	Colobus_angolensis_palliatus
ENSCVAG00000003357	sf3b2	85	74.801	ENSCGRG00001015741	Sf3b2	97	68.525	Cricetulus_griseus_chok1gshd
ENSCVAG00000003357	sf3b2	85	74.801	ENSCGRG00000018110	Sf3b2	97	68.525	Cricetulus_griseus_crigri
ENSCVAG00000003357	sf3b2	87	81.830	ENSCSEG00000000230	sf3b2	88	82.763	Cynoglossus_semilaevis
ENSCVAG00000003357	sf3b2	97	71.277	ENSDARG00000018049	sf3b2	99	73.474	Danio_rerio
ENSCVAG00000003357	sf3b2	85	74.700	ENSDNOG00000009484	SF3B2	93	73.190	Dasypus_novemcinctus
ENSCVAG00000003357	sf3b2	85	74.667	ENSDORG00000002495	Sf3b2	97	68.677	Dipodomys_ordii
ENSCVAG00000003357	sf3b2	56	80.787	ENSETEG00000020284	SF3B2	83	80.787	Echinops_telfairi
ENSCVAG00000003357	sf3b2	91	60.637	ENSEBUG00000013703	sf3b2	99	56.921	Eptatretus_burgeri
ENSCVAG00000003357	sf3b2	85	73.568	ENSEASG00005004508	SF3B2	84	71.822	Equus_asinus_asinus
ENSCVAG00000003357	sf3b2	85	73.568	ENSECAG00000024461	SF3B2	84	71.822	Equus_caballus
ENSCVAG00000003357	sf3b2	59	84.746	ENSEEUG00000014278	-	58	84.746	Erinaceus_europaeus
ENSCVAG00000003357	sf3b2	100	74.403	ENSELUG00000005586	sf3b2	100	74.838	Esox_lucius
ENSCVAG00000003357	sf3b2	85	75.100	ENSFCAG00000013289	SF3B2	84	73.324	Felis_catus
ENSCVAG00000003357	sf3b2	76	68.203	ENSFALG00000014653	SF3B2	91	68.154	Ficedula_albicollis
ENSCVAG00000003357	sf3b2	85	73.413	ENSFDAG00000019806	SF3B2	97	67.664	Fukomys_damarensis
ENSCVAG00000003357	sf3b2	100	92.173	ENSFHEG00000020968	sf3b2	100	92.173	Fundulus_heteroclitus
ENSCVAG00000003357	sf3b2	77	84.418	ENSGMOG00000012131	sf3b2	100	85.952	Gadus_morhua
ENSCVAG00000003357	sf3b2	100	90.349	ENSGAFG00000001675	sf3b2	100	91.405	Gambusia_affinis
ENSCVAG00000003357	sf3b2	77	84.674	ENSGACG00000019012	sf3b2	100	85.606	Gasterosteus_aculeatus
ENSCVAG00000003357	sf3b2	98	68.981	ENSGAGG00000023916	SF3B2	86	74.801	Gopherus_agassizii
ENSCVAG00000003357	sf3b2	77	89.518	ENSGGOG00000028448	SF3B2	97	89.518	Gorilla_gorilla
ENSCVAG00000003357	sf3b2	100	83.908	ENSHBUG00000017349	sf3b2	100	84.713	Haplochromis_burtoni
ENSCVAG00000003357	sf3b2	85	74.668	ENSHGLG00000010807	SF3B2	97	68.641	Heterocephalus_glaber_female
ENSCVAG00000003357	sf3b2	85	74.668	ENSHGLG00100006361	SF3B2	97	68.641	Heterocephalus_glaber_male
ENSCVAG00000003357	sf3b2	100	75.941	ENSHCOG00000016203	sf3b2	100	76.256	Hippocampus_comes
ENSCVAG00000003357	sf3b2	100	71.732	ENSIPUG00000009383	sf3b2	100	71.955	Ictalurus_punctatus
ENSCVAG00000003357	sf3b2	85	74.801	ENSSTOG00000028892	SF3B2	97	68.641	Ictidomys_tridecemlineatus
ENSCVAG00000003357	sf3b2	85	73.518	ENSJJAG00000018193	Sf3b2	97	68.403	Jaculus_jaculus
ENSCVAG00000003357	sf3b2	100	82.212	ENSKMAG00000020181	sf3b2	100	81.756	Kryptolebias_marmoratus
ENSCVAG00000003357	sf3b2	100	85.134	ENSLBEG00000027739	sf3b2	100	85.598	Labrus_bergylta
ENSCVAG00000003357	sf3b2	85	74.700	ENSLAFG00000002128	SF3B2	84	73.190	Loxodonta_africana
ENSCVAG00000003357	sf3b2	97	67.509	ENSMFAG00000003064	SF3B2	97	68.910	Macaca_fascicularis
ENSCVAG00000003357	sf3b2	85	71.067	ENSMMUG00000011743	SF3B2	97	65.578	Macaca_mulatta
ENSCVAG00000003357	sf3b2	97	67.586	ENSMNEG00000034437	SF3B2	97	68.830	Macaca_nemestrina
ENSCVAG00000003357	sf3b2	97	67.471	ENSMLEG00000029373	SF3B2	97	68.830	Mandrillus_leucophaeus
ENSCVAG00000003357	sf3b2	100	83.068	ENSMAMG00000014103	sf3b2	100	83.864	Mastacembelus_armatus
ENSCVAG00000003357	sf3b2	100	83.908	ENSMZEG00005020789	sf3b2	100	84.713	Maylandia_zebra
ENSCVAG00000003357	sf3b2	85	74.801	ENSMICG00000008565	-	97	68.873	Microcebus_murinus
ENSCVAG00000003357	sf3b2	97	68.779	ENSMICG00000016942	-	95	66.323	Microcebus_murinus
ENSCVAG00000003357	sf3b2	85	74.536	ENSMOCG00000003136	Sf3b2	97	68.525	Microtus_ochrogaster
ENSCVAG00000003357	sf3b2	100	78.555	ENSMMOG00000012928	sf3b2	86	83.400	Mola_mola
ENSCVAG00000003357	sf3b2	74	75.472	ENSMODG00000025020	-	99	72.627	Monodelphis_domestica
ENSCVAG00000003357	sf3b2	85	74.734	ENSMODG00000008490	-	91	75.000	Monodelphis_domestica
ENSCVAG00000003357	sf3b2	100	80.462	ENSMALG00000015137	sf3b2	85	85.753	Monopterus_albus
ENSCVAG00000003357	sf3b2	85	73.572	MGP_CAROLIEiJ_G0022539	Sf3b2	97	68.372	Mus_caroli
ENSCVAG00000003357	sf3b2	85	74.801	ENSMUSG00000024853	Sf3b2	97	68.525	Mus_musculus
ENSCVAG00000003357	sf3b2	85	74.536	MGP_PahariEiJ_G0014036	Sf3b2	97	68.409	Mus_pahari
ENSCVAG00000003357	sf3b2	85	74.668	MGP_SPRETEiJ_G0023453	Sf3b2	97	68.409	Mus_spretus
ENSCVAG00000003357	sf3b2	85	73.664	ENSMPUG00000011349	SF3B2	84	71.916	Mustela_putorius_furo
ENSCVAG00000003357	sf3b2	85	73.107	ENSMLUG00000011136	SF3B2	84	71.916	Myotis_lucifugus
ENSCVAG00000003357	sf3b2	85	74.635	ENSNGAG00000012103	Sf3b2	97	68.605	Nannospalax_galili
ENSCVAG00000003357	sf3b2	85	70.658	ENSNLEG00000006007	SF3B2	97	66.090	Nomascus_leucogenys
ENSCVAG00000003357	sf3b2	77	84.091	ENSMEUG00000000019	SF3B2	79	84.091	Notamacropus_eugenii
ENSCVAG00000003357	sf3b2	97	65.826	ENSODEG00000017764	SF3B2	96	66.504	Octodon_degus
ENSCVAG00000003357	sf3b2	100	84.265	ENSONIG00000013068	sf3b2	100	84.265	Oreochromis_niloticus
ENSCVAG00000003357	sf3b2	85	67.244	ENSOANG00000012482	SF3B2	65	81.782	Ornithorhynchus_anatinus
ENSCVAG00000003357	sf3b2	97	67.650	ENSOCUG00000015722	-	97	66.781	Oryctolagus_cuniculus
ENSCVAG00000003357	sf3b2	62	48.991	ENSOCUG00000024154	-	100	47.993	Oryctolagus_cuniculus
ENSCVAG00000003357	sf3b2	100	80.600	ENSORLG00000008235	sf3b2	85	86.248	Oryzias_latipes
ENSCVAG00000003357	sf3b2	100	80.600	ENSORLG00020005357	sf3b2	88	86.248	Oryzias_latipes_hni
ENSCVAG00000003357	sf3b2	100	80.831	ENSORLG00015022454	sf3b2	91	79.673	Oryzias_latipes_hsok
ENSCVAG00000003357	sf3b2	100	80.997	ENSOMEG00000017480	sf3b2	89	85.944	Oryzias_melastigma
ENSCVAG00000003357	sf3b2	85	68.947	ENSOGAG00000005799	SF3B2	97	65.222	Otolemur_garnettii
ENSCVAG00000003357	sf3b2	97	67.694	ENSOARG00000002125	SF3B2	100	72.372	Ovis_aries
ENSCVAG00000003357	sf3b2	85	74.934	ENSPPAG00000007359	SF3B2	97	68.171	Pan_paniscus
ENSCVAG00000003357	sf3b2	85	75.100	ENSPPRG00000013334	SF3B2	84	73.324	Panthera_pardus
ENSCVAG00000003357	sf3b2	85	75.100	ENSPTIG00000015022	SF3B2	84	73.324	Panthera_tigris_altaica
ENSCVAG00000003357	sf3b2	85	74.934	ENSPTRG00000003912	SF3B2	97	68.171	Pan_troglodytes
ENSCVAG00000003357	sf3b2	97	67.586	ENSPANG00000008593	SF3B2	97	68.990	Papio_anubis
ENSCVAG00000003357	sf3b2	100	73.266	ENSPKIG00000016576	sf3b2	100	72.931	Paramormyrops_kingsleyae
ENSCVAG00000003357	sf3b2	86	74.733	ENSPSIG00000003158	SF3B2	97	75.499	Pelodiscus_sinensis
ENSCVAG00000003357	sf3b2	92	75.000	ENSPMGG00000000819	sf3b2	93	76.965	Periophthalmus_magnuspinnatus
ENSCVAG00000003357	sf3b2	83	66.938	ENSPEMG00000015451	-	91	67.703	Peromyscus_maniculatus_bairdii
ENSCVAG00000003357	sf3b2	85	74.668	ENSPEMG00000015437	Sf3b2	97	68.641	Peromyscus_maniculatus_bairdii
ENSCVAG00000003357	sf3b2	85	73.607	ENSPCIG00000008381	SF3B2	97	69.336	Phascolarctos_cinereus
ENSCVAG00000003357	sf3b2	100	91.628	ENSPFOG00000002552	sf3b2	100	91.279	Poecilia_formosa
ENSCVAG00000003357	sf3b2	100	91.385	ENSPLAG00000001471	sf3b2	100	91.279	Poecilia_latipinna
ENSCVAG00000003357	sf3b2	100	91.502	ENSPMEG00000013180	sf3b2	100	90.803	Poecilia_mexicana
ENSCVAG00000003357	sf3b2	100	90.665	ENSPREG00000002665	sf3b2	100	90.909	Poecilia_reticulata
ENSCVAG00000003357	sf3b2	58	67.603	ENSPPYG00000003034	-	94	60.842	Pongo_abelii
ENSCVAG00000003357	sf3b2	85	73.664	ENSPCAG00000005129	SF3B2	84	72.047	Procavia_capensis
ENSCVAG00000003357	sf3b2	85	74.668	ENSPCOG00000025375	SF3B2	97	68.757	Propithecus_coquereli
ENSCVAG00000003357	sf3b2	54	92.544	ENSPVAG00000005466	-	83	92.544	Pteropus_vampyrus
ENSCVAG00000003357	sf3b2	97	81.892	ENSPNYG00000023594	sf3b2	100	83.514	Pundamilia_nyererei
ENSCVAG00000003357	sf3b2	87	75.990	ENSPNAG00000001891	sf3b2	100	73.754	Pygocentrus_nattereri
ENSCVAG00000003357	sf3b2	85	73.307	ENSRNOG00000020412	Sf3b2	97	68.525	Rattus_norvegicus
ENSCVAG00000003357	sf3b2	85	74.768	ENSRBIG00000034065	SF3B2	97	68.990	Rhinopithecus_bieti
ENSCVAG00000003357	sf3b2	85	74.768	ENSRROG00000034496	SF3B2	97	68.990	Rhinopithecus_roxellana
ENSCVAG00000003357	sf3b2	97	68.243	ENSSBOG00000026337	SF3B2	97	65.989	Saimiri_boliviensis_boliviensis
ENSCVAG00000003357	sf3b2	96	58.747	ENSSHAG00000018043	-	88	60.403	Sarcophilus_harrisii
ENSCVAG00000003357	sf3b2	74	78.831	ENSSHAG00000010933	-	84	71.429	Sarcophilus_harrisii
ENSCVAG00000003357	sf3b2	100	74.447	ENSSFOG00015021125	sf3b2	100	73.436	Scleropages_formosus
ENSCVAG00000003357	sf3b2	100	82.313	ENSSMAG00000004079	sf3b2	97	83.787	Scophthalmus_maximus
ENSCVAG00000003357	sf3b2	100	83.927	ENSSLDG00000006838	sf3b2	100	85.763	Seriola_lalandi_dorsalis
ENSCVAG00000003357	sf3b2	51	92.105	ENSSARG00000003707	-	52	91.270	Sorex_araneus
ENSCVAG00000003357	sf3b2	74	81.487	ENSSPUG00000009198	SF3B2	84	74.730	Sphenodon_punctatus
ENSCVAG00000003357	sf3b2	100	83.128	ENSSPAG00000004406	sf3b2	100	83.352	Stegastes_partitus
ENSCVAG00000003357	sf3b2	85	72.229	ENSSSCG00000012957	SF3B2	84	71.654	Sus_scrofa
ENSCVAG00000003357	sf3b2	100	64.220	ENSTRUG00000007611	sf3b2	95	75.068	Takifugu_rubripes
ENSCVAG00000003357	sf3b2	97	76.914	ENSTNIG00000007441	sf3b2	100	75.508	Tetraodon_nigroviridis
ENSCVAG00000003357	sf3b2	79	71.429	ENSTBEG00000004258	SF3B2	78	87.857	Tupaia_belangeri
ENSCVAG00000003357	sf3b2	85	73.533	ENSTTRG00000014339	SF3B2	84	71.654	Tursiops_truncatus
ENSCVAG00000003357	sf3b2	83	73.154	ENSUAMG00000020754	SF3B2	81	71.351	Ursus_americanus
ENSCVAG00000003357	sf3b2	85	73.664	ENSUMAG00000010994	SF3B2	84	71.916	Ursus_maritimus
ENSCVAG00000003357	sf3b2	58	83.898	ENSVPAG00000008695	SF3B2	62	83.898	Vicugna_pacos
ENSCVAG00000003357	sf3b2	85	73.664	ENSVVUG00000027029	SF3B2	84	71.916	Vulpes_vulpes
ENSCVAG00000003357	sf3b2	84	68.059	ENSXETG00000008422	sf3b2	86	73.049	Xenopus_tropicalis
ENSCVAG00000003357	sf3b2	89	82.672	ENSXCOG00000008943	sf3b2	95	82.228	Xiphophorus_couchianus
ENSCVAG00000003357	sf3b2	100	90.278	ENSXMAG00000008467	sf3b2	100	90.636	Xiphophorus_maculatus