EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003376 (Gene tree)
Gene ID: 107087196
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC107087196
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5111 bases
Position: chrKL652675.1:528560-533670
Accession: 107087196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002301	tRNA-synt_2	PF00152.20	9.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011957	-	4740	XM_015378629	ENSCVAP00000002301	1579 (aa)	XP_015234115	UPI000742A142

Gene Model

Click here to download ENSCVAG00000003376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003376	si:ch211-256m1.8	100	76.374	ENSAPOG00000007012	si:ch211-256m1.8	100	76.374	Acanthochromis_polyacanthus
ENSCVAG00000003376	si:ch211-256m1.8	100	76.500	ENSAOCG00000012258	si:ch211-256m1.8	100	76.500	Amphiprion_ocellaris
ENSCVAG00000003376	si:ch211-256m1.8	100	76.500	ENSAPEG00000002724	si:ch211-256m1.8	100	76.500	Amphiprion_percula
ENSCVAG00000003376	si:ch211-256m1.8	100	76.374	ENSATEG00000006278	si:ch211-256m1.8	100	76.374	Anabas_testudineus
ENSCVAG00000003376	si:ch211-256m1.8	100	76.374	ENSACLG00000011503	si:ch211-256m1.8	100	76.374	Astatotilapia_calliptera
ENSCVAG00000003376	si:ch211-256m1.8	100	66.646	ENSAMXG00000038245	si:ch211-256m1.8	100	66.646	Astyanax_mexicanus
ENSCVAG00000003376	si:ch211-256m1.8	100	72.205	ENSCSEG00000006255	si:ch211-256m1.8	100	72.205	Cynoglossus_semilaevis
ENSCVAG00000003376	si:ch211-256m1.8	100	66.037	ENSDARG00000055172	si:ch211-256m1.8	100	66.163	Danio_rerio
ENSCVAG00000003376	si:ch211-256m1.8	100	67.830	ENSELUG00000010546	si:ch211-256m1.8	100	67.830	Esox_lucius
ENSCVAG00000003376	si:ch211-256m1.8	100	84.104	ENSFHEG00000005847	si:ch211-256m1.8	100	84.104	Fundulus_heteroclitus
ENSCVAG00000003376	si:ch211-256m1.8	100	87.017	ENSGAFG00000010269	si:ch211-256m1.8	100	87.017	Gambusia_affinis
ENSCVAG00000003376	si:ch211-256m1.8	100	76.563	ENSHBUG00000014407	si:ch211-256m1.8	100	76.563	Haplochromis_burtoni
ENSCVAG00000003376	si:ch211-256m1.8	100	71.058	ENSHCOG00000006884	si:ch211-256m1.8	100	71.302	Hippocampus_comes
ENSCVAG00000003376	si:ch211-256m1.8	100	65.469	ENSIPUG00000022659	si:ch211-256m1.8	100	65.469	Ictalurus_punctatus
ENSCVAG00000003376	si:ch211-256m1.8	100	79.037	ENSKMAG00000016377	si:ch211-256m1.8	100	79.037	Kryptolebias_marmoratus
ENSCVAG00000003376	si:ch211-256m1.8	100	76.563	ENSLBEG00000010639	si:ch211-256m1.8	100	76.563	Labrus_bergylta
ENSCVAG00000003376	si:ch211-256m1.8	100	58.511	ENSLOCG00000011127	si:ch211-256m1.8	100	58.010	Lepisosteus_oculatus
ENSCVAG00000003376	si:ch211-256m1.8	100	76.076	ENSMAMG00000005651	si:ch211-256m1.8	100	76.076	Mastacembelus_armatus
ENSCVAG00000003376	si:ch211-256m1.8	100	76.374	ENSMZEG00005006924	si:ch211-256m1.8	100	76.374	Maylandia_zebra
ENSCVAG00000003376	si:ch211-256m1.8	100	72.383	ENSMMOG00000001736	si:ch211-256m1.8	100	72.383	Mola_mola
ENSCVAG00000003376	si:ch211-256m1.8	100	76.311	ENSNBRG00000005143	si:ch211-256m1.8	100	76.311	Neolamprologus_brichardi
ENSCVAG00000003376	si:ch211-256m1.8	100	75.696	ENSORLG00000022248	si:ch211-256m1.8	100	75.696	Oryzias_latipes
ENSCVAG00000003376	si:ch211-256m1.8	100	75.506	ENSORLG00020000214	si:ch211-256m1.8	100	75.506	Oryzias_latipes_hni
ENSCVAG00000003376	si:ch211-256m1.8	100	75.427	ENSORLG00015020297	si:ch211-256m1.8	100	75.427	Oryzias_latipes_hsok
ENSCVAG00000003376	si:ch211-256m1.8	100	75.997	ENSOMEG00000004519	si:ch211-256m1.8	100	75.997	Oryzias_melastigma
ENSCVAG00000003376	si:ch211-256m1.8	95	66.831	ENSPKIG00000007399	si:ch211-256m1.8	99	66.831	Paramormyrops_kingsleyae
ENSCVAG00000003376	si:ch211-256m1.8	100	65.741	ENSPMGG00000007698	si:ch211-256m1.8	100	65.741	Periophthalmus_magnuspinnatus
ENSCVAG00000003376	si:ch211-256m1.8	100	87.524	ENSPFOG00000005178	si:ch211-256m1.8	100	87.524	Poecilia_formosa
ENSCVAG00000003376	si:ch211-256m1.8	100	87.334	ENSPLAG00000006872	si:ch211-256m1.8	100	87.334	Poecilia_latipinna
ENSCVAG00000003376	si:ch211-256m1.8	100	87.397	ENSPMEG00000021815	si:ch211-256m1.8	100	87.397	Poecilia_mexicana
ENSCVAG00000003376	si:ch211-256m1.8	100	87.650	ENSPREG00000018669	si:ch211-256m1.8	100	87.650	Poecilia_reticulata
ENSCVAG00000003376	si:ch211-256m1.8	100	76.374	ENSPNYG00000018038	si:ch211-256m1.8	100	76.374	Pundamilia_nyererei
ENSCVAG00000003376	si:ch211-256m1.8	99	66.646	ENSPNAG00000018965	-	99	66.583	Pygocentrus_nattereri
ENSCVAG00000003376	si:ch211-256m1.8	99	67.649	ENSPNAG00000003552	si:ch211-256m1.8	99	67.774	Pygocentrus_nattereri
ENSCVAG00000003376	si:ch211-256m1.8	100	63.688	ENSSFOG00015008344	si:ch211-256m1.8	100	63.688	Scleropages_formosus
ENSCVAG00000003376	si:ch211-256m1.8	100	76.627	ENSSMAG00000007562	si:ch211-256m1.8	100	76.627	Scophthalmus_maximus
ENSCVAG00000003376	si:ch211-256m1.8	100	78.214	ENSSDUG00000018180	si:ch211-256m1.8	100	78.214	Seriola_dumerili
ENSCVAG00000003376	si:ch211-256m1.8	100	77.961	ENSSLDG00000020310	si:ch211-256m1.8	100	77.961	Seriola_lalandi_dorsalis
ENSCVAG00000003376	si:ch211-256m1.8	100	77.132	ENSSPAG00000013419	si:ch211-256m1.8	100	77.132	Stegastes_partitus
ENSCVAG00000003376	si:ch211-256m1.8	100	68.245	ENSTRUG00000023803	si:ch211-256m1.8	100	68.245	Takifugu_rubripes
ENSCVAG00000003376	si:ch211-256m1.8	100	87.460	ENSXCOG00000017726	si:ch211-256m1.8	100	87.460	Xiphophorus_couchianus
ENSCVAG00000003376	si:ch211-256m1.8	100	87.397	ENSXMAG00000026576	si:ch211-256m1.8	100	87.397	Xiphophorus_maculatus