EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003418 (Gene tree)
Gene ID: 107086603
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14648 bases
Position: chrKL652657.1:603468-618115
Accession: 107086603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002337	NUC173	PF08161.12	3.6e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011900	-	4454	XM_015377659	ENSCVAP00000002337	1289 (aa)	XP_015233145	UPI000742AE57

Gene Model

Click here to download ENSCVAG00000003418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003418	rrp12	92	76.316	ENSG00000052749	RRP12	100	76.705	Homo_sapiens
ENSCVAG00000003418	rrp12	99	85.759	ENSAPOG00000013355	rrp12	99	85.603	Acanthochromis_polyacanthus
ENSCVAG00000003418	rrp12	99	64.028	ENSAMEG00000000134	RRP12	99	64.474	Ailuropoda_melanoleuca
ENSCVAG00000003418	rrp12	99	87.891	ENSACIG00000022673	rrp12	99	87.500	Amphilophus_citrinellus
ENSCVAG00000003418	rrp12	99	88.594	ENSAOCG00000016149	rrp12	99	88.438	Amphiprion_ocellaris
ENSCVAG00000003418	rrp12	99	86.916	ENSAPEG00000016023	rrp12	99	86.760	Amphiprion_percula
ENSCVAG00000003418	rrp12	99	87.598	ENSATEG00000022627	rrp12	99	87.441	Anabas_testudineus
ENSCVAG00000003418	rrp12	97	60.717	ENSAPLG00000014387	RRP12	99	60.769	Anas_platyrhynchos
ENSCVAG00000003418	rrp12	99	60.478	ENSACAG00000002175	RRP12	99	59.860	Anolis_carolinensis
ENSCVAG00000003418	rrp12	92	75.658	ENSANAG00000037485	RRP12	99	75.658	Aotus_nancymaae
ENSCVAG00000003418	rrp12	99	86.562	ENSACLG00000007354	rrp12	99	86.406	Astatotilapia_calliptera
ENSCVAG00000003418	rrp12	99	75.932	ENSAMXG00000012852	rrp12	99	76.016	Astyanax_mexicanus
ENSCVAG00000003418	rrp12	99	63.720	ENSBTAG00000002191	RRP12	99	75.325	Bos_taurus
ENSCVAG00000003418	rrp12	85	61.909	ENSCJAG00000016549	-	99	62.340	Callithrix_jacchus
ENSCVAG00000003418	rrp12	99	64.055	ENSCAFG00000009043	RRP12	99	64.192	Canis_familiaris
ENSCVAG00000003418	rrp12	99	64.055	ENSCAFG00020005991	RRP12	99	64.192	Canis_lupus_dingo
ENSCVAG00000003418	rrp12	99	61.480	ENSCHIG00000011876	RRP12	99	61.633	Capra_hircus
ENSCVAG00000003418	rrp12	53	56.223	ENSTSYG00000030210	-	98	57.184	Carlito_syrichta
ENSCVAG00000003418	rrp12	97	57.348	ENSCAPG00000008991	RRP12	97	57.568	Cavia_aperea
ENSCVAG00000003418	rrp12	100	62.992	ENSCPOG00000004215	RRP12	99	63.248	Cavia_porcellus
ENSCVAG00000003418	rrp12	79	66.667	ENSCCAG00000024088	RRP12	98	68.000	Cebus_capucinus
ENSCVAG00000003418	rrp12	70	59.560	ENSCCAG00000033123	-	82	59.735	Cebus_capucinus
ENSCVAG00000003418	rrp12	99	60.000	ENSCATG00000045310	RRP12	99	60.341	Cercocebus_atys
ENSCVAG00000003418	rrp12	100	62.943	ENSCLAG00000003753	RRP12	99	63.354	Chinchilla_lanigera
ENSCVAG00000003418	rrp12	88	62.195	ENSCSAG00000005877	RRP12	99	62.511	Chlorocebus_sabaeus
ENSCVAG00000003418	rrp12	59	70.715	ENSCHOG00000003095	-	60	70.715	Choloepus_hoffmanni
ENSCVAG00000003418	rrp12	94	65.622	ENSCPBG00000011935	RRP12	97	65.809	Chrysemys_picta_bellii
ENSCVAG00000003418	rrp12	64	40.710	ENSCSAVG00000006059	-	99	39.593	Ciona_savignyi
ENSCVAG00000003418	rrp12	92	76.316	ENSCANG00000031653	RRP12	99	76.316	Colobus_angolensis_palliatus
ENSCVAG00000003418	rrp12	90	63.962	ENSCGRG00001004338	Rrp12	99	64.120	Cricetulus_griseus_chok1gshd
ENSCVAG00000003418	rrp12	99	63.601	ENSCGRG00000011965	Rrp12	99	63.742	Cricetulus_griseus_crigri
ENSCVAG00000003418	rrp12	99	83.320	ENSCSEG00000007799	rrp12	99	83.607	Cynoglossus_semilaevis
ENSCVAG00000003418	rrp12	99	74.011	ENSDARG00000022410	rrp12	99	74.317	Danio_rerio
ENSCVAG00000003418	rrp12	99	63.510	ENSDNOG00000005120	RRP12	99	64.037	Dasypus_novemcinctus
ENSCVAG00000003418	rrp12	99	63.797	ENSDORG00000009199	Rrp12	99	64.269	Dipodomys_ordii
ENSCVAG00000003418	rrp12	93	58.889	ENSETEG00000002455	RRP12	92	68.116	Echinops_telfairi
ENSCVAG00000003418	rrp12	92	50.633	ENSEBUG00000006555	rrp12	97	50.633	Eptatretus_burgeri
ENSCVAG00000003418	rrp12	99	64.203	ENSEASG00005008693	RRP12	99	64.884	Equus_asinus_asinus
ENSCVAG00000003418	rrp12	94	63.964	ENSECAG00000010892	RRP12	99	64.769	Equus_caballus
ENSCVAG00000003418	rrp12	64	57.941	ENSEEUG00000005447	-	64	57.941	Erinaceus_europaeus
ENSCVAG00000003418	rrp12	99	78.217	ENSELUG00000010510	rrp12	100	78.069	Esox_lucius
ENSCVAG00000003418	rrp12	99	64.593	ENSFCAG00000028639	RRP12	99	76.316	Felis_catus
ENSCVAG00000003418	rrp12	94	63.413	ENSFALG00000008458	RRP12	99	63.983	Ficedula_albicollis
ENSCVAG00000003418	rrp12	99	62.914	ENSFDAG00000019108	RRP12	95	63.199	Fukomys_damarensis
ENSCVAG00000003418	rrp12	99	83.685	ENSFHEG00000004148	rrp12	99	83.216	Fundulus_heteroclitus
ENSCVAG00000003418	rrp12	99	70.611	ENSGMOG00000004188	rrp12	99	71.184	Gadus_morhua
ENSCVAG00000003418	rrp12	99	63.826	ENSGALG00000041331	RRP12	96	65.073	Gallus_gallus
ENSCVAG00000003418	rrp12	99	93.125	ENSGAFG00000009038	rrp12	99	93.125	Gambusia_affinis
ENSCVAG00000003418	rrp12	99	83.750	ENSGACG00000007175	rrp12	99	83.750	Gasterosteus_aculeatus
ENSCVAG00000003418	rrp12	67	68.397	ENSGAGG00000019169	RRP12	96	68.397	Gopherus_agassizii
ENSCVAG00000003418	rrp12	92	76.316	ENSGGOG00000014850	RRP12	99	76.316	Gorilla_gorilla
ENSCVAG00000003418	rrp12	99	86.875	ENSHBUG00000023527	rrp12	99	86.719	Haplochromis_burtoni
ENSCVAG00000003418	rrp12	99	63.349	ENSHGLG00000016772	RRP12	99	63.792	Heterocephalus_glaber_female
ENSCVAG00000003418	rrp12	99	63.349	ENSHGLG00100015110	RRP12	99	63.792	Heterocephalus_glaber_male
ENSCVAG00000003418	rrp12	100	80.528	ENSHCOG00000019519	rrp12	99	80.610	Hippocampus_comes
ENSCVAG00000003418	rrp12	100	75.000	ENSIPUG00000000311	RRP12	99	75.195	Ictalurus_punctatus
ENSCVAG00000003418	rrp12	99	64.203	ENSSTOG00000006515	RRP12	99	64.802	Ictidomys_tridecemlineatus
ENSCVAG00000003418	rrp12	96	63.578	ENSJJAG00000000110	Rrp12	98	63.849	Jaculus_jaculus
ENSCVAG00000003418	rrp12	99	87.959	ENSKMAG00000020621	rrp12	99	87.959	Kryptolebias_marmoratus
ENSCVAG00000003418	rrp12	99	81.289	ENSLBEG00000015335	rrp12	99	81.953	Labrus_bergylta
ENSCVAG00000003418	rrp12	72	65.056	ENSLACG00000016633	RRP12	82	65.056	Latimeria_chalumnae
ENSCVAG00000003418	rrp12	100	70.898	ENSLOCG00000003846	rrp12	99	71.005	Lepisosteus_oculatus
ENSCVAG00000003418	rrp12	99	64.132	ENSLAFG00000015965	RRP12	99	64.451	Loxodonta_africana
ENSCVAG00000003418	rrp12	92	75.658	ENSMFAG00000041558	RRP12	99	75.658	Macaca_fascicularis
ENSCVAG00000003418	rrp12	92	75.658	ENSMMUG00000019634	RRP12	99	75.658	Macaca_mulatta
ENSCVAG00000003418	rrp12	92	75.658	ENSMNEG00000036759	RRP12	99	75.658	Macaca_nemestrina
ENSCVAG00000003418	rrp12	92	76.316	ENSMLEG00000041317	RRP12	99	61.694	Mandrillus_leucophaeus
ENSCVAG00000003418	rrp12	99	84.597	ENSMAMG00000002964	rrp12	99	86.928	Mastacembelus_armatus
ENSCVAG00000003418	rrp12	99	86.719	ENSMZEG00005003241	rrp12	99	86.562	Maylandia_zebra
ENSCVAG00000003418	rrp12	99	62.385	ENSMGAG00000009829	RRP12	99	62.558	Meleagris_gallopavo
ENSCVAG00000003418	rrp12	99	61.824	ENSMAUG00000020743	Rrp12	99	61.957	Mesocricetus_auratus
ENSCVAG00000003418	rrp12	99	64.203	ENSMICG00000007624	RRP12	99	77.778	Microcebus_murinus
ENSCVAG00000003418	rrp12	100	64.049	ENSMOCG00000006753	Rrp12	99	64.313	Microtus_ochrogaster
ENSCVAG00000003418	rrp12	100	82.713	ENSMMOG00000010708	rrp12	99	82.812	Mola_mola
ENSCVAG00000003418	rrp12	99	64.888	ENSMODG00000004315	RRP12	99	64.825	Monodelphis_domestica
ENSCVAG00000003418	rrp12	99	79.907	ENSMALG00000016560	rrp12	99	85.593	Monopterus_albus
ENSCVAG00000003418	rrp12	99	63.435	MGP_CAROLIEiJ_G0022957	Rrp12	99	63.685	Mus_caroli
ENSCVAG00000003418	rrp12	99	64.176	ENSMUSG00000035049	Rrp12	99	64.391	Mus_musculus
ENSCVAG00000003418	rrp12	100	64.126	MGP_PahariEiJ_G0014447	Rrp12	99	64.469	Mus_pahari
ENSCVAG00000003418	rrp12	99	64.253	MGP_SPRETEiJ_G0023878	Rrp12	99	64.469	Mus_spretus
ENSCVAG00000003418	rrp12	99	63.538	ENSMPUG00000017046	RRP12	99	63.981	Mustela_putorius_furo
ENSCVAG00000003418	rrp12	99	64.467	ENSMLUG00000017160	RRP12	99	64.683	Myotis_lucifugus
ENSCVAG00000003418	rrp12	99	64.330	ENSNGAG00000024144	Rrp12	99	64.546	Nannospalax_galili
ENSCVAG00000003418	rrp12	99	85.312	ENSNBRG00000009987	rrp12	99	84.922	Neolamprologus_brichardi
ENSCVAG00000003418	rrp12	99	56.034	ENSNLEG00000013762	RRP12	99	75.658	Nomascus_leucogenys
ENSCVAG00000003418	rrp12	100	59.214	ENSMEUG00000003185	RRP12	99	59.222	Notamacropus_eugenii
ENSCVAG00000003418	rrp12	94	67.554	ENSOPRG00000005001	RRP12	93	67.554	Ochotona_princeps
ENSCVAG00000003418	rrp12	100	63.052	ENSODEG00000016439	RRP12	99	63.232	Octodon_degus
ENSCVAG00000003418	rrp12	99	87.578	ENSONIG00000009528	rrp12	99	87.422	Oreochromis_niloticus
ENSCVAG00000003418	rrp12	100	60.092	ENSOANG00000006560	RRP12	99	59.938	Ornithorhynchus_anatinus
ENSCVAG00000003418	rrp12	99	63.349	ENSOCUG00000005662	RRP12	99	64.258	Oryctolagus_cuniculus
ENSCVAG00000003418	rrp12	99	85.859	ENSORLG00000008688	rrp12	99	85.847	Oryzias_latipes
ENSCVAG00000003418	rrp12	97	86.078	ENSORLG00020002355	rrp12	99	85.760	Oryzias_latipes_hni
ENSCVAG00000003418	rrp12	99	86.016	ENSORLG00015006709	rrp12	99	85.703	Oryzias_latipes_hsok
ENSCVAG00000003418	rrp12	97	86.476	ENSOMEG00000002609	rrp12	99	86.158	Oryzias_melastigma
ENSCVAG00000003418	rrp12	99	63.134	ENSOGAG00000001626	RRP12	99	63.650	Otolemur_garnettii
ENSCVAG00000003418	rrp12	99	63.057	ENSOARG00000009681	RRP12	99	63.186	Ovis_aries
ENSCVAG00000003418	rrp12	92	76.316	ENSPPAG00000043885	RRP12	99	76.316	Pan_paniscus
ENSCVAG00000003418	rrp12	99	64.363	ENSPPRG00000002029	RRP12	99	75.658	Panthera_pardus
ENSCVAG00000003418	rrp12	99	61.656	ENSPTIG00000004428	RRP12	99	76.316	Panthera_tigris_altaica
ENSCVAG00000003418	rrp12	92	76.316	ENSPTRG00000002806	RRP12	99	76.316	Pan_troglodytes
ENSCVAG00000003418	rrp12	92	76.316	ENSPANG00000021360	RRP12	99	76.316	Papio_anubis
ENSCVAG00000003418	rrp12	100	74.884	ENSPKIG00000016516	rrp12	99	74.922	Paramormyrops_kingsleyae
ENSCVAG00000003418	rrp12	99	81.889	ENSPMGG00000020217	rrp12	99	81.421	Periophthalmus_magnuspinnatus
ENSCVAG00000003418	rrp12	100	64.385	ENSPEMG00000008437	Rrp12	99	64.729	Peromyscus_maniculatus_bairdii
ENSCVAG00000003418	rrp12	89	52.941	ENSPMAG00000007493	rrp12	87	52.941	Petromyzon_marinus
ENSCVAG00000003418	rrp12	99	64.651	ENSPCIG00000002157	RRP12	99	64.587	Phascolarctos_cinereus
ENSCVAG00000003418	rrp12	99	92.500	ENSPFOG00000014975	rrp12	99	92.422	Poecilia_formosa
ENSCVAG00000003418	rrp12	99	92.266	ENSPLAG00000009840	rrp12	99	92.188	Poecilia_latipinna
ENSCVAG00000003418	rrp12	99	92.500	ENSPMEG00000021871	rrp12	99	92.422	Poecilia_mexicana
ENSCVAG00000003418	rrp12	99	88.631	ENSPREG00000020950	rrp12	99	88.949	Poecilia_reticulata
ENSCVAG00000003418	rrp12	99	63.231	ENSPPYG00000002528	RRP12	99	63.517	Pongo_abelii
ENSCVAG00000003418	rrp12	94	77.401	ENSPCAG00000008967	RRP12	94	77.401	Procavia_capensis
ENSCVAG00000003418	rrp12	99	64.324	ENSPCOG00000014009	RRP12	99	76.974	Propithecus_coquereli
ENSCVAG00000003418	rrp12	99	61.124	ENSPVAG00000003370	RRP12	99	61.318	Pteropus_vampyrus
ENSCVAG00000003418	rrp12	99	86.953	ENSPNYG00000009451	rrp12	99	86.797	Pundamilia_nyererei
ENSCVAG00000003418	rrp12	93	89.796	ENSPNAG00000007658	rrp12	99	76.388	Pygocentrus_nattereri
ENSCVAG00000003418	rrp12	99	64.071	ENSRNOG00000048495	Rrp12	99	64.286	Rattus_norvegicus
ENSCVAG00000003418	rrp12	92	76.316	ENSRBIG00000021296	RRP12	99	76.316	Rhinopithecus_bieti
ENSCVAG00000003418	rrp12	92	76.316	ENSRROG00000032482	RRP12	99	76.316	Rhinopithecus_roxellana
ENSCVAG00000003418	rrp12	92	75.000	ENSSBOG00000030992	RRP12	99	75.000	Saimiri_boliviensis_boliviensis
ENSCVAG00000003418	rrp12	99	64.861	ENSSHAG00000018275	RRP12	99	64.486	Sarcophilus_harrisii
ENSCVAG00000003418	rrp12	99	76.165	ENSSFOG00015016400	rrp12	99	76.287	Scleropages_formosus
ENSCVAG00000003418	rrp12	99	85.614	ENSSMAG00000004047	rrp12	99	85.614	Scophthalmus_maximus
ENSCVAG00000003418	rrp12	99	87.656	ENSSDUG00000022871	rrp12	99	87.578	Seriola_dumerili
ENSCVAG00000003418	rrp12	99	87.422	ENSSLDG00000003038	rrp12	99	87.344	Seriola_lalandi_dorsalis
ENSCVAG00000003418	rrp12	100	62.154	ENSSPUG00000012221	RRP12	99	62.568	Sphenodon_punctatus
ENSCVAG00000003418	rrp12	99	88.281	ENSSPAG00000002261	rrp12	99	88.438	Stegastes_partitus
ENSCVAG00000003418	rrp12	100	63.279	ENSSSCG00000010514	RRP12	99	63.615	Sus_scrofa
ENSCVAG00000003418	rrp12	89	60.836	ENSTGUG00000009711	RRP12	99	61.038	Taeniopygia_guttata
ENSCVAG00000003418	rrp12	100	79.364	ENSTRUG00000012017	rrp12	99	79.046	Takifugu_rubripes
ENSCVAG00000003418	rrp12	100	83.101	ENSTNIG00000016522	rrp12	99	83.190	Tetraodon_nigroviridis
ENSCVAG00000003418	rrp12	77	73.529	ENSTBEG00000004907	RRP12	79	73.529	Tupaia_belangeri
ENSCVAG00000003418	rrp12	100	61.941	ENSTTRG00000009878	RRP12	99	62.189	Tursiops_truncatus
ENSCVAG00000003418	rrp12	99	64.160	ENSUAMG00000009092	RRP12	99	64.606	Ursus_americanus
ENSCVAG00000003418	rrp12	99	62.548	ENSUMAG00000021621	RRP12	99	62.908	Ursus_maritimus
ENSCVAG00000003418	rrp12	99	64.291	ENSVVUG00000023168	RRP12	99	64.214	Vulpes_vulpes
ENSCVAG00000003418	rrp12	99	66.641	ENSXETG00000003430	rrp12	99	66.745	Xenopus_tropicalis
ENSCVAG00000003418	rrp12	90	91.660	ENSXCOG00000012082	rrp12	99	91.360	Xiphophorus_couchianus
ENSCVAG00000003418	rrp12	99	92.578	ENSXMAG00000013498	rrp12	99	92.734	Xiphophorus_maculatus