EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003478 (Gene tree)
Gene ID: 107080839
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10427 bases
Position: chrKL652537.1:129313-139739
Accession: 107080839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002360	RRM_1	PF00076.22	3.1e-09	1	1
ENSCVAP00000002360	PWI	PF01480.17	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011847	-	2409	XM_015369047	ENSCVAP00000002360	802 (aa)	XP_015224533	-

Gene Model

Click here to download ENSCVAG00000003478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003478	rbm25b	71	65.710	ENSCVAG00000005498	rbm25a	99	68.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003478	rbm25b	54	68.552	ENSG00000119707	RBM25	100	68.504	Homo_sapiens
ENSCVAG00000003478	rbm25b	57	86.864	ENSAPOG00000015321	rbm25b	100	87.469	Acanthochromis_polyacanthus
ENSCVAG00000003478	rbm25b	58	70.850	ENSAPOG00000017757	rbm25a	62	66.667	Acanthochromis_polyacanthus
ENSCVAG00000003478	rbm25b	54	68.552	ENSAMEG00000016270	RBM25	54	67.894	Ailuropoda_melanoleuca
ENSCVAG00000003478	rbm25b	57	84.582	ENSACIG00000014178	rbm25b	58	83.857	Amphilophus_citrinellus
ENSCVAG00000003478	rbm25b	55	75.877	ENSACIG00000019482	rbm25a	60	71.888	Amphilophus_citrinellus
ENSCVAG00000003478	rbm25b	58	82.526	ENSAOCG00000019308	rbm25b	58	81.762	Amphiprion_ocellaris
ENSCVAG00000003478	rbm25b	55	74.123	ENSAOCG00000013695	rbm25a	57	69.877	Amphiprion_ocellaris
ENSCVAG00000003478	rbm25b	55	74.123	ENSAPEG00000007514	rbm25a	58	69.877	Amphiprion_percula
ENSCVAG00000003478	rbm25b	100	85.381	ENSAPEG00000009666	rbm25b	62	85.451	Amphiprion_percula
ENSCVAG00000003478	rbm25b	58	86.316	ENSATEG00000017312	rbm25b	100	85.258	Anabas_testudineus
ENSCVAG00000003478	rbm25b	56	76.119	ENSATEG00000020676	rbm25a	67	70.297	Anabas_testudineus
ENSCVAG00000003478	rbm25b	54	69.752	ENSAPLG00000006643	RBM25	57	68.454	Anas_platyrhynchos
ENSCVAG00000003478	rbm25b	54	68.552	ENSANAG00000028295	RBM25	98	67.474	Aotus_nancymaae
ENSCVAG00000003478	rbm25b	57	88.136	ENSACLG00000024359	rbm25b	59	87.397	Astatotilapia_calliptera
ENSCVAG00000003478	rbm25b	88	72.727	ENSACLG00000027482	rbm25a	85	70.549	Astatotilapia_calliptera
ENSCVAG00000003478	rbm25b	51	73.239	ENSAMXG00000024525	rbm25b	52	73.427	Astyanax_mexicanus
ENSCVAG00000003478	rbm25b	54	32.816	WBGene00012245	W04D2.6	86	33.755	Caenorhabditis_elegans
ENSCVAG00000003478	rbm25b	54	68.552	ENSCJAG00000014441	-	98	67.820	Callithrix_jacchus
ENSCVAG00000003478	rbm25b	54	69.005	ENSTSYG00000003024	RBM25	98	67.820	Carlito_syrichta
ENSCVAG00000003478	rbm25b	51	79.096	ENSCAPG00000005239	RBM25	79	79.096	Cavia_aperea
ENSCVAG00000003478	rbm25b	54	68.552	ENSCATG00000039651	RBM25	98	67.820	Cercocebus_atys
ENSCVAG00000003478	rbm25b	62	79.096	ENSCHOG00000008903	RBM25	63	79.096	Choloepus_hoffmanni
ENSCVAG00000003478	rbm25b	86	65.753	ENSCANG00000043874	RBM25	98	67.820	Colobus_angolensis_palliatus
ENSCVAG00000003478	rbm25b	55	73.144	ENSCSEG00000009430	rbm25a	60	69.592	Cynoglossus_semilaevis
ENSCVAG00000003478	rbm25b	100	79.828	ENSCSEG00000020737	rbm25b	59	82.231	Cynoglossus_semilaevis
ENSCVAG00000003478	rbm25b	53	61.503	ENSDARG00000039266	rbm25a	99	92.405	Danio_rerio
ENSCVAG00000003478	rbm25b	86	66.514	ENSEEUG00000007350	RBM25	81	67.431	Erinaceus_europaeus
ENSCVAG00000003478	rbm25b	57	62.876	ENSELUG00000021847	rbm25a	53	61.277	Esox_lucius
ENSCVAG00000003478	rbm25b	58	72.746	ENSELUG00000007730	rbm25b	100	72.414	Esox_lucius
ENSCVAG00000003478	rbm25b	54	68.552	ENSFCAG00000011716	RBM25	98	67.820	Felis_catus
ENSCVAG00000003478	rbm25b	100	65.444	ENSFHEG00000005318	rbm25a	94	69.118	Fundulus_heteroclitus
ENSCVAG00000003478	rbm25b	57	89.641	ENSFHEG00000003513	rbm25b	100	89.364	Fundulus_heteroclitus
ENSCVAG00000003478	rbm25b	87	79.556	ENSGMOG00000014097	rbm25b	63	79.556	Gadus_morhua
ENSCVAG00000003478	rbm25b	60	78.988	ENSGMOG00000014070	rbm25a	81	77.551	Gadus_morhua
ENSCVAG00000003478	rbm25b	98	88.409	ENSGAFG00000001092	rbm25b	100	81.446	Gambusia_affinis
ENSCVAG00000003478	rbm25b	54	68.552	ENSGGOG00000002415	RBM25	98	67.820	Gorilla_gorilla
ENSCVAG00000003478	rbm25b	56	72.727	ENSHBUG00000016908	rbm25a	52	70.549	Haplochromis_burtoni
ENSCVAG00000003478	rbm25b	57	87.712	ENSHBUG00000018499	rbm25b	59	86.983	Haplochromis_burtoni
ENSCVAG00000003478	rbm25b	54	68.707	ENSHGLG00100018236	-	99	72.165	Heterocephalus_glaber_male
ENSCVAG00000003478	rbm25b	100	75.787	ENSHCOG00000000142	rbm25b	99	77.193	Hippocampus_comes
ENSCVAG00000003478	rbm25b	56	76.674	ENSKMAG00000018826	rbm25b	100	88.098	Kryptolebias_marmoratus
ENSCVAG00000003478	rbm25b	100	85.958	ENSLBEG00000010667	rbm25b	100	85.890	Labrus_bergylta
ENSCVAG00000003478	rbm25b	58	69.247	ENSLACG00000011845	RBM25	56	67.901	Latimeria_chalumnae
ENSCVAG00000003478	rbm25b	57	67.775	ENSLOCG00000014196	rbm25b	56	67.611	Lepisosteus_oculatus
ENSCVAG00000003478	rbm25b	54	68.552	ENSMFAG00000040040	RBM25	98	67.820	Macaca_fascicularis
ENSCVAG00000003478	rbm25b	54	68.552	ENSMMUG00000002332	RBM25	100	65.909	Macaca_mulatta
ENSCVAG00000003478	rbm25b	54	68.552	ENSMLEG00000035157	RBM25	98	67.820	Mandrillus_leucophaeus
ENSCVAG00000003478	rbm25b	58	85.201	ENSMAMG00000004524	rbm25b	100	86.700	Mastacembelus_armatus
ENSCVAG00000003478	rbm25b	52	71.429	ENSMAMG00000000165	rbm25a	61	62.992	Mastacembelus_armatus
ENSCVAG00000003478	rbm25b	56	72.727	ENSMZEG00005011183	rbm25a	56	69.848	Maylandia_zebra
ENSCVAG00000003478	rbm25b	57	88.136	ENSMZEG00005001453	rbm25b	59	87.397	Maylandia_zebra
ENSCVAG00000003478	rbm25b	54	69.752	ENSMGAG00000011707	RBM25	54	68.660	Meleagris_gallopavo
ENSCVAG00000003478	rbm25b	54	68.552	ENSMICG00000034082	RBM25	98	67.474	Microcebus_murinus
ENSCVAG00000003478	rbm25b	100	73.913	ENSMMOG00000015545	rbm25b	64	85.714	Mola_mola
ENSCVAG00000003478	rbm25b	58	84.342	ENSMALG00000020441	rbm25b	92	85.391	Monopterus_albus
ENSCVAG00000003478	rbm25b	54	68.552	MGP_CAROLIEiJ_G0017921	Rbm25	99	71.649	Mus_caroli
ENSCVAG00000003478	rbm25b	54	68.552	ENSMUSG00000010608	Rbm25	99	71.649	Mus_musculus
ENSCVAG00000003478	rbm25b	54	68.552	MGP_PahariEiJ_G0029677	Rbm25	99	71.649	Mus_pahari
ENSCVAG00000003478	rbm25b	54	68.552	ENSMPUG00000003698	RBM25	99	57.618	Mustela_putorius_furo
ENSCVAG00000003478	rbm25b	56	65.000	ENSMLUG00000015434	-	51	64.912	Myotis_lucifugus
ENSCVAG00000003478	rbm25b	57	80.338	ENSNBRG00000022192	rbm25b	58	79.536	Neolamprologus_brichardi
ENSCVAG00000003478	rbm25b	54	68.552	ENSNLEG00000002701	RBM25	98	67.820	Nomascus_leucogenys
ENSCVAG00000003478	rbm25b	58	83.087	ENSORLG00000011874	rbm25b	99	84.644	Oryzias_latipes
ENSCVAG00000003478	rbm25b	58	82.875	ENSORLG00020016422	rbm25b	99	84.644	Oryzias_latipes_hni
ENSCVAG00000003478	rbm25b	58	82.875	ENSORLG00015011269	rbm25b	99	84.275	Oryzias_latipes_hsok
ENSCVAG00000003478	rbm25b	57	83.439	ENSOMEG00000023172	rbm25b	100	81.740	Oryzias_melastigma
ENSCVAG00000003478	rbm25b	52	66.302	ENSOMEG00000022138	rbm25a	63	61.868	Oryzias_melastigma
ENSCVAG00000003478	rbm25b	54	68.481	ENSOGAG00000014986	RBM25	54	67.967	Otolemur_garnettii
ENSCVAG00000003478	rbm25b	54	68.552	ENSPPAG00000039402	RBM25	98	67.820	Pan_paniscus
ENSCVAG00000003478	rbm25b	54	68.552	ENSPPRG00000017374	RBM25	98	67.820	Panthera_pardus
ENSCVAG00000003478	rbm25b	54	68.552	ENSPTIG00000017309	RBM25	98	67.820	Panthera_tigris_altaica
ENSCVAG00000003478	rbm25b	54	68.552	ENSPTRG00000006509	RBM25	98	67.820	Pan_troglodytes
ENSCVAG00000003478	rbm25b	54	68.552	ENSPANG00000018212	RBM25	98	67.820	Papio_anubis
ENSCVAG00000003478	rbm25b	52	61.485	ENSPMGG00000001791	rbm25a	100	61.174	Periophthalmus_magnuspinnatus
ENSCVAG00000003478	rbm25b	99	82.784	ENSPMGG00000015740	rbm25b	100	82.784	Periophthalmus_magnuspinnatus
ENSCVAG00000003478	rbm25b	100	70.983	ENSPLAG00000018338	rbm25a	94	69.231	Poecilia_latipinna
ENSCVAG00000003478	rbm25b	100	70.743	ENSPMEG00000024470	rbm25a	59	67.659	Poecilia_mexicana
ENSCVAG00000003478	rbm25b	52	67.647	ENSPCAG00000006226	RBM25	81	70.815	Procavia_capensis
ENSCVAG00000003478	rbm25b	54	68.552	ENSPCOG00000023107	RBM25	98	67.820	Propithecus_coquereli
ENSCVAG00000003478	rbm25b	57	80.550	ENSPNYG00000023303	rbm25b	58	79.747	Pundamilia_nyererei
ENSCVAG00000003478	rbm25b	56	72.727	ENSPNYG00000022596	rbm25a	53	70.549	Pundamilia_nyererei
ENSCVAG00000003478	rbm25b	54	67.873	ENSRNOG00000002871	Rbm25l1	54	67.216	Rattus_norvegicus
ENSCVAG00000003478	rbm25b	54	68.552	ENSRBIG00000039904	RBM25	98	67.820	Rhinopithecus_bieti
ENSCVAG00000003478	rbm25b	54	68.552	ENSRROG00000035556	RBM25	98	67.820	Rhinopithecus_roxellana
ENSCVAG00000003478	rbm25b	100	82.598	ENSSMAG00000002520	rbm25b	100	83.721	Scophthalmus_maximus
ENSCVAG00000003478	rbm25b	55	77.074	ENSSDUG00000017984	rbm25a	60	73.878	Seriola_dumerili
ENSCVAG00000003478	rbm25b	56	88.121	ENSSLDG00000024573	rbm25b	98	89.135	Seriola_lalandi_dorsalis
ENSCVAG00000003478	rbm25b	55	77.074	ENSSLDG00000010342	rbm25a	58	73.878	Seriola_lalandi_dorsalis
ENSCVAG00000003478	rbm25b	100	80.556	ENSSPAG00000016168	rbm25b	100	87.195	Stegastes_partitus
ENSCVAG00000003478	rbm25b	100	85.117	ENSTRUG00000017964	rbm25b	59	85.300	Takifugu_rubripes
ENSCVAG00000003478	rbm25b	56	78.155	ENSTBEG00000010538	-	54	78.155	Tupaia_belangeri
ENSCVAG00000003478	rbm25b	54	65.197	ENSUAMG00000007707	RBM25	100	65.909	Ursus_americanus
ENSCVAG00000003478	rbm25b	53	64.979	ENSVPAG00000009052	RBM25	81	68.103	Vicugna_pacos
ENSCVAG00000003478	rbm25b	100	83.272	ENSXCOG00000002222	rbm25b	100	82.073	Xiphophorus_couchianus
ENSCVAG00000003478	rbm25b	100	88.902	ENSXMAG00000017290	rbm25b	100	90.482	Xiphophorus_maculatus