EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9995 bases
Position: chrKL654047.1:111793-121787
Accession: 107103868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021438	Gar1	PF04410.14	4.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011815	-	903	XM_015403711	ENSCVAP00000021438	300 (aa)	XP_015259197	-

Gene Model

Click here to download ENSCVAG00000003483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003483	-	53	53.939	ENSG00000145414	NAF1	90	68.421	Homo_sapiens
ENSCVAG00000003483	-	89	56.552	ENSAPOG00000007663	-	70	56.610	Acanthochromis_polyacanthus
ENSCVAG00000003483	-	88	56.944	ENSAOCG00000003518	-	71	56.949	Amphiprion_ocellaris
ENSCVAG00000003483	-	87	58.451	ENSAPEG00000004453	-	70	57.627	Amphiprion_percula
ENSCVAG00000003483	-	93	56.522	ENSATEG00000003514	-	59	58.416	Anabas_testudineus
ENSCVAG00000003483	-	53	55.152	ENSANAG00000025253	NAF1	91	66.667	Aotus_nancymaae
ENSCVAG00000003483	-	89	56.014	ENSACLG00000017092	-	69	56.842	Astatotilapia_calliptera
ENSCVAG00000003483	-	51	55.696	ENSCJAG00000012406	NAF1	93	66.667	Callithrix_jacchus
ENSCVAG00000003483	-	51	56.329	ENSTSYG00000005946	NAF1	93	62.500	Carlito_syrichta
ENSCVAG00000003483	-	51	56.962	ENSCCAG00000030023	NAF1	93	66.667	Cebus_capucinus
ENSCVAG00000003483	-	53	53.939	ENSCATG00000022663	NAF1	90	68.421	Cercocebus_atys
ENSCVAG00000003483	-	53	53.939	ENSCANG00000039151	NAF1	90	68.421	Colobus_angolensis_palliatus
ENSCVAG00000003483	-	76	68.724	ENSFHEG00000015835	-	63	68.259	Fundulus_heteroclitus
ENSCVAG00000003483	-	89	67.931	ENSGAFG00000017883	-	58	68.729	Gambusia_affinis
ENSCVAG00000003483	-	53	53.939	ENSGGOG00000000894	NAF1	90	68.421	Gorilla_gorilla
ENSCVAG00000003483	-	52	75.796	ENSHBUG00000002404	-	52	75.796	Haplochromis_burtoni
ENSCVAG00000003483	-	94	58.983	ENSKMAG00000005434	-	65	60.510	Kryptolebias_marmoratus
ENSCVAG00000003483	-	73	60.241	ENSLBEG00000020414	-	56	61.864	Labrus_bergylta
ENSCVAG00000003483	-	53	53.939	ENSMFAG00000040952	NAF1	90	68.421	Macaca_fascicularis
ENSCVAG00000003483	-	53	53.939	ENSMMUG00000001717	NAF1	90	68.421	Macaca_mulatta
ENSCVAG00000003483	-	53	53.939	ENSMNEG00000032677	NAF1	90	68.421	Macaca_nemestrina
ENSCVAG00000003483	-	53	53.939	ENSMLEG00000035330	NAF1	90	68.421	Mandrillus_leucophaeus
ENSCVAG00000003483	-	88	55.442	ENSMAMG00000003269	-	89	57.239	Mastacembelus_armatus
ENSCVAG00000003483	-	89	56.401	ENSMZEG00005005830	-	71	57.244	Maylandia_zebra
ENSCVAG00000003483	-	53	53.086	ENSMGAG00000002133	NAF1	52	52.727	Meleagris_gallopavo
ENSCVAG00000003483	-	51	55.696	ENSMICG00000038661	NAF1	93	57.500	Microcebus_murinus
ENSCVAG00000003483	-	72	54.378	ENSMMOG00000016895	-	58	54.167	Mola_mola
ENSCVAG00000003483	-	94	59.459	ENSMALG00000018482	-	67	56.393	Monopterus_albus
ENSCVAG00000003483	-	51	55.696	ENSNLEG00000006459	-	90	68.421	Nomascus_leucogenys
ENSCVAG00000003483	-	89	56.250	ENSONIG00000001826	-	84	56.207	Oreochromis_niloticus
ENSCVAG00000003483	-	87	50.000	ENSORLG00000002191	-	60	49.249	Oryzias_latipes
ENSCVAG00000003483	-	87	49.686	ENSORLG00020013478	-	60	49.249	Oryzias_latipes_hni
ENSCVAG00000003483	-	87	49.686	ENSORLG00015012985	-	55	48.428	Oryzias_latipes_hsok
ENSCVAG00000003483	-	51	72.549	ENSOMEG00000021322	-	64	51.290	Oryzias_melastigma
ENSCVAG00000003483	-	53	53.939	ENSPPAG00000034674	NAF1	90	68.421	Pan_paniscus
ENSCVAG00000003483	-	53	53.939	ENSPTRG00000016560	NAF1	90	68.421	Pan_troglodytes
ENSCVAG00000003483	-	53	53.939	ENSPANG00000015574	NAF1	90	68.421	Papio_anubis
ENSCVAG00000003483	-	89	67.347	ENSPFOG00000010705	-	85	64.423	Poecilia_formosa
ENSCVAG00000003483	-	89	67.007	ENSPLAG00000002200	-	61	67.687	Poecilia_latipinna
ENSCVAG00000003483	-	89	70.068	ENSPMEG00000004437	-	61	70.307	Poecilia_mexicana
ENSCVAG00000003483	-	89	68.707	ENSPREG00000022551	-	61	68.942	Poecilia_reticulata
ENSCVAG00000003483	-	89	51.748	ENSPNYG00000021456	-	51	75.316	Pundamilia_nyererei
ENSCVAG00000003483	-	80	41.406	ENSPNAG00000001219	naf1	51	45.418	Pygocentrus_nattereri
ENSCVAG00000003483	-	51	56.329	ENSRBIG00000030027	NAF1	90	68.421	Rhinopithecus_bieti
ENSCVAG00000003483	-	51	56.329	ENSRROG00000040912	NAF1	90	68.421	Rhinopithecus_roxellana
ENSCVAG00000003483	-	53	53.939	ENSSBOG00000002085	NAF1	93	66.667	Saimiri_boliviensis_boliviensis
ENSCVAG00000003483	-	88	51.961	ENSSMAG00000015529	-	74	54.221	Scophthalmus_maximus
ENSCVAG00000003483	-	94	57.419	ENSSDUG00000005987	-	78	59.627	Seriola_dumerili
ENSCVAG00000003483	-	72	54.762	ENSSLDG00000019761	-	67	53.094	Seriola_lalandi_dorsalis
ENSCVAG00000003483	-	50	58.389	ENSSPUG00000004087	NAF1	52	58.000	Sphenodon_punctatus
ENSCVAG00000003483	-	51	54.430	ENSVPAG00000007182	-	63	54.430	Vicugna_pacos
ENSCVAG00000003483	-	89	73.091	ENSXCOG00000013058	-	91	74.182	Xiphophorus_couchianus
ENSCVAG00000003483	-	89	69.072	ENSXMAG00000011494	-	60	70.103	Xiphophorus_maculatus