EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003498 (Gene tree)
Gene ID: -
Gene Symbol: slbp2
Alias: zgc:158856
Full Name: stem-loop binding protein 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 7274 bases
Position: chrKL652800.1:888072-895345
Accession: ZDB-GENE-070112-1722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002399	SLBP_RNA_bind	PF15247.6	1.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011790	-	834	-	ENSCVAP00000002399	277 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003498	slbp2	83	71.429	ENSAPOG00000004873	slbp2	85	70.563	Acanthochromis_polyacanthus
ENSCVAG00000003498	slbp2	83	64.794	ENSACIG00000007875	slbp2	84	64.794	Amphilophus_citrinellus
ENSCVAG00000003498	slbp2	91	58.147	ENSAOCG00000016241	slbp2	92	58.147	Amphiprion_ocellaris
ENSCVAG00000003498	slbp2	78	64.912	ENSAPEG00000008972	slbp2	99	64.912	Amphiprion_percula
ENSCVAG00000003498	slbp2	75	67.411	ENSATEG00000009765	slbp2	71	67.411	Anabas_testudineus
ENSCVAG00000003498	slbp2	87	61.279	ENSACLG00000000965	slbp2	85	61.279	Astatotilapia_calliptera
ENSCVAG00000003498	slbp2	87	61.279	ENSACLG00000001252	slbp2	85	61.279	Astatotilapia_calliptera
ENSCVAG00000003498	slbp2	82	50.735	ENSAMXG00000029210	slbp2	83	50.735	Astyanax_mexicanus
ENSCVAG00000003498	slbp2	82	53.584	ENSCSEG00000006662	slbp2	80	53.584	Cynoglossus_semilaevis
ENSCVAG00000003498	slbp2	92	49.007	ENSDARG00000069428	slbp2	92	49.007	Danio_rerio
ENSCVAG00000003498	slbp2	88	53.585	ENSELUG00000021799	slbp2	88	53.585	Esox_lucius
ENSCVAG00000003498	slbp2	81	50.890	ENSGMOG00000003044	slbp2	100	51.246	Gadus_morhua
ENSCVAG00000003498	slbp2	83	67.164	ENSGAFG00000009788	slbp2	92	67.164	Gambusia_affinis
ENSCVAG00000003498	slbp2	87	61.279	ENSHBUG00000019207	slbp2	85	61.279	Haplochromis_burtoni
ENSCVAG00000003498	slbp2	86	53.667	ENSHCOG00000002192	slbp2	85	53.667	Hippocampus_comes
ENSCVAG00000003498	slbp2	86	50.182	ENSIPUG00000024079	slbp2	87	50.182	Ictalurus_punctatus
ENSCVAG00000003498	slbp2	87	63.793	ENSKMAG00000005391	-	85	63.793	Kryptolebias_marmoratus
ENSCVAG00000003498	slbp2	87	59.333	ENSLBEG00000001991	slbp2	85	59.333	Labrus_bergylta
ENSCVAG00000003498	slbp2	86	57.860	ENSMAMG00000022433	slbp2	84	57.860	Mastacembelus_armatus
ENSCVAG00000003498	slbp2	87	60.943	ENSMZEG00005027825	slbp2	85	60.943	Maylandia_zebra
ENSCVAG00000003498	slbp2	74	58.233	ENSMMOG00000016838	slbp2	94	58.233	Mola_mola
ENSCVAG00000003498	slbp2	87	56.667	ENSMALG00000009687	slbp2	81	56.667	Monopterus_albus
ENSCVAG00000003498	slbp2	84	71.308	ENSNBRG00000017849	slbp2	85	71.308	Neolamprologus_brichardi
ENSCVAG00000003498	slbp2	87	60.526	ENSONIG00000017877	slbp2	87	61.794	Oreochromis_niloticus
ENSCVAG00000003498	slbp2	86	58.305	ENSORLG00000025890	slbp2	85	58.305	Oryzias_latipes
ENSCVAG00000003498	slbp2	86	58.644	ENSORLG00020003230	slbp2	85	58.644	Oryzias_latipes_hni
ENSCVAG00000003498	slbp2	86	58.644	ENSORLG00015007694	slbp2	85	58.644	Oryzias_latipes_hsok
ENSCVAG00000003498	slbp2	87	58.784	ENSOMEG00000017456	slbp2	85	58.784	Oryzias_melastigma
ENSCVAG00000003498	slbp2	80	47.273	ENSPKIG00000008757	slbp2	89	47.273	Paramormyrops_kingsleyae
ENSCVAG00000003498	slbp2	70	62.437	ENSPMGG00000008118	slbp2	89	62.437	Periophthalmus_magnuspinnatus
ENSCVAG00000003498	slbp2	86	64.138	ENSPFOG00000021993	slbp2	94	64.138	Poecilia_formosa
ENSCVAG00000003498	slbp2	86	64.138	ENSPLAG00000019220	slbp2	85	64.138	Poecilia_latipinna
ENSCVAG00000003498	slbp2	86	64.138	ENSPLAG00000006548	-	86	64.138	Poecilia_latipinna
ENSCVAG00000003498	slbp2	86	64.138	ENSPMEG00000024341	slbp2	85	64.138	Poecilia_mexicana
ENSCVAG00000003498	slbp2	87	70.370	ENSPNYG00000022514	slbp2	92	70.370	Pundamilia_nyererei
ENSCVAG00000003498	slbp2	86	51.071	ENSPNAG00000013685	slbp2	86	51.071	Pygocentrus_nattereri
ENSCVAG00000003498	slbp2	57	47.475	ENSSFOG00015015666	-	92	47.475	Scleropages_formosus
ENSCVAG00000003498	slbp2	87	57.667	ENSSMAG00000011121	slbp2	87	60.417	Scophthalmus_maximus
ENSCVAG00000003498	slbp2	87	61.695	ENSSDUG00000023370	slbp2	85	61.695	Seriola_dumerili
ENSCVAG00000003498	slbp2	84	70.940	ENSSLDG00000008723	slbp2	70	70.940	Seriola_lalandi_dorsalis
ENSCVAG00000003498	slbp2	75	70.233	ENSSPAG00000011574	slbp2	75	70.233	Stegastes_partitus
ENSCVAG00000003498	slbp2	86	56.463	ENSTRUG00000021937	slbp2	85	56.463	Takifugu_rubripes
ENSCVAG00000003498	slbp2	52	46.575	ENSUAMG00000000146	-	72	48.201	Ursus_americanus
ENSCVAG00000003498	slbp2	50	48.201	ENSUMAG00000016224	-	72	48.201	Ursus_maritimus
ENSCVAG00000003498	slbp2	86	65.862	ENSXMAG00000007005	slbp2	85	65.862	Xiphophorus_maculatus