EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003537 (Gene tree)
Gene ID: 107091770
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 17503 bases
Position: chrKL652851.1:680921-698423
Accession: 107091770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021460	MMR_HSR1	PF01926.23	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011731	-	2466	XM_015385920	ENSCVAP00000021460	209 (aa)	XP_015241406	UPI0007427698

Gene Model

Click here to download ENSCVAG00000003537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003537	si:dkey-16l2.16	78	40.805	ENSCVAG00000000862	-	77	40.805
ENSCVAG00000003537	si:dkey-16l2.16	98	40.670	ENSCVAG00000017021	-	80	45.402
ENSCVAG00000003537	si:dkey-16l2.16	92	53.886	ENSCVAG00000022799	-	79	61.875
ENSCVAG00000003537	si:dkey-16l2.16	84	45.198	ENSCVAG00000008276	RAB15	88	50.467
ENSCVAG00000003537	si:dkey-16l2.16	83	31.818	ENSCVAG00000001281	rhebl1	88	33.133
ENSCVAG00000003537	si:dkey-16l2.16	96	32.850	ENSCVAG00000002953	RAB9A	87	36.000
ENSCVAG00000003537	si:dkey-16l2.16	78	34.337	ENSCVAG00000008670	hrasb	87	34.337
ENSCVAG00000003537	si:dkey-16l2.16	97	33.333	ENSCVAG00000014038	RAB29	82	37.791
ENSCVAG00000003537	si:dkey-16l2.16	95	34.597	ENSCVAG00000018191	rab34a	66	37.714
ENSCVAG00000003537	si:dkey-16l2.16	98	42.439	ENSCVAG00000020003	rab25b	76	48.101
ENSCVAG00000003537	si:dkey-16l2.16	99	69.082	ENSCVAG00000012806	rab35b	86	77.457
ENSCVAG00000003537	si:dkey-16l2.16	55	31.034	ENSCVAG00000021960	arl3	61	31.034
ENSCVAG00000003537	si:dkey-16l2.16	96	34.826	ENSCVAG00000009550	rab5c	76	39.286
ENSCVAG00000003537	si:dkey-16l2.16	98	40.000	ENSCVAG00000008126	-	75	46.203
ENSCVAG00000003537	si:dkey-16l2.16	55	32.203	ENSCVAG00000004305	arl4aa	59	32.203
ENSCVAG00000003537	si:dkey-16l2.16	78	35.542	ENSCVAG00000004027	rheb	89	35.542
ENSCVAG00000003537	si:dkey-16l2.16	81	41.860	ENSCVAG00000003539	rab12	70	41.860
ENSCVAG00000003537	si:dkey-16l2.16	84	36.269	ENSCVAG00000000281	RAB7A	83	37.572
ENSCVAG00000003537	si:dkey-16l2.16	78	40.244	ENSCVAG00000018433	rab22a	83	40.373
ENSCVAG00000003537	si:dkey-16l2.16	98	38.942	ENSCVAG00000020016	rab11al	81	44.828
ENSCVAG00000003537	si:dkey-16l2.16	98	40.670	ENSCVAG00000019751	-	80	45.402
ENSCVAG00000003537	si:dkey-16l2.16	96	34.783	ENSCVAG00000016312	rab9a	78	37.647
ENSCVAG00000003537	si:dkey-16l2.16	79	31.492	ENSCVAG00000013135	rasl11a	69	31.492
ENSCVAG00000003537	si:dkey-16l2.16	77	32.515	ENSCVAG00000008389	si:ch73-116o1.2	78	32.515
ENSCVAG00000003537	si:dkey-16l2.16	78	62.577	ENSCVAG00000009222	zgc:171927	76	62.963
ENSCVAG00000003537	si:dkey-16l2.16	74	35.065	ENSCVAG00000020501	rab23	78	35.000
ENSCVAG00000003537	si:dkey-16l2.16	98	41.627	ENSCVAG00000019718	-	80	45.402
ENSCVAG00000003537	si:dkey-16l2.16	77	33.333	ENSCVAG00000006062	KRAS	88	32.143
ENSCVAG00000003537	si:dkey-16l2.16	77	39.394	ENSCVAG00000012889	rab6ba	74	39.610
ENSCVAG00000003537	si:dkey-16l2.16	77	40.244	ENSCVAG00000022249	rab6a	74	40.260
ENSCVAG00000003537	si:dkey-16l2.16	86	39.444	ENSCVAG00000010727	rab4a	79	41.071
ENSCVAG00000003537	si:dkey-16l2.16	81	51.765	ENSCVAG00000022649	-	85	51.765
ENSCVAG00000003537	si:dkey-16l2.16	98	39.130	ENSCVAG00000014915	RAB39B	77	46.341
ENSCVAG00000003537	si:dkey-16l2.16	55	30.172	ENSCVAG00000010611	arl3l2	59	30.172
ENSCVAG00000003537	si:dkey-16l2.16	96	36.453	ENSCVAG00000014416	-	77	40.994
ENSCVAG00000003537	si:dkey-16l2.16	78	38.462	ENSCVAG00000005429	-	81	38.462
ENSCVAG00000003537	si:dkey-16l2.16	82	34.091	ENSCVAG00000006083	si:cabz01085950.1	83	34.132
ENSCVAG00000003537	si:dkey-16l2.16	98	42.308	ENSCVAG00000013878	rab11a	96	41.748
ENSCVAG00000003537	si:dkey-16l2.16	80	31.548	ENSCVAG00000011432	rabl2	78	31.034
ENSCVAG00000003537	si:dkey-16l2.16	81	37.714	ENSCVAG00000021826	rab9b	86	37.714
ENSCVAG00000003537	si:dkey-16l2.16	85	43.333	ENSCVAG00000019227	zgc:101559	73	44.706
ENSCVAG00000003537	si:dkey-16l2.16	81	40.351	ENSCVAG00000022353	rab14	80	40.351
ENSCVAG00000003537	si:dkey-16l2.16	85	46.629	ENSCVAG00000018085	rab30	88	46.629
ENSCVAG00000003537	si:dkey-16l2.16	90	42.784	ENSCVAG00000011665	rab33a	62	45.349
ENSCVAG00000003537	si:dkey-16l2.16	80	41.279	ENSCVAG00000017064	si:dkey-34d22.5	77	41.279
ENSCVAG00000003537	si:dkey-16l2.16	73	41.558	ENSCVAG00000001618	rab41	73	41.558
ENSCVAG00000003537	si:dkey-16l2.16	80	42.262	ENSCVAG00000008239	rab5aa	78	42.262
ENSCVAG00000003537	si:dkey-16l2.16	82	44.068	ENSCVAG00000015451	rab18a	80	45.732
ENSCVAG00000003537	si:dkey-16l2.16	98	36.190	ENSCVAG00000017623	rab2a	75	44.025
ENSCVAG00000003537	si:dkey-16l2.16	79	36.257	ENSCVAG00000001150	si:dkey-13a21.4	83	36.257
ENSCVAG00000003537	si:dkey-16l2.16	73	39.610	ENSCVAG00000004751	rab6bb	74	39.610
ENSCVAG00000003537	si:dkey-16l2.16	61	31.579	ENSCVAG00000013902	-	78	31.579
ENSCVAG00000003537	si:dkey-16l2.16	79	45.833	ENSCVAG00000015862	-	77	46.951
ENSCVAG00000003537	si:dkey-16l2.16	75	63.291	ENSCVAG00000022585	-	77	63.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003537	si:dkey-16l2.16	100	94.258	ENSAPOG00000008263	si:dkey-16l2.16	100	94.258	Acanthochromis_polyacanthus
ENSCVAG00000003537	si:dkey-16l2.16	100	95.694	ENSAOCG00000016825	si:dkey-16l2.16	100	95.694	Amphiprion_ocellaris
ENSCVAG00000003537	si:dkey-16l2.16	100	95.694	ENSAPEG00000006500	si:dkey-16l2.16	100	95.694	Amphiprion_percula
ENSCVAG00000003537	si:dkey-16l2.16	100	93.780	ENSATEG00000019238	si:dkey-16l2.16	100	93.780	Anabas_testudineus
ENSCVAG00000003537	si:dkey-16l2.16	100	94.258	ENSACLG00000018721	si:dkey-16l2.16	100	94.258	Astatotilapia_calliptera
ENSCVAG00000003537	si:dkey-16l2.16	100	93.301	ENSAMXG00000038243	si:dkey-16l2.16	100	93.301	Astyanax_mexicanus
ENSCVAG00000003537	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	ENSDARG00000037967	si:dkey-16l2.16	99	95.763	Danio_rerio
ENSCVAG00000003537	si:dkey-16l2.16	99	86.058	ENSELUG00000023247	si:dkey-16l2.16	99	84.615	Esox_lucius
ENSCVAG00000003537	si:dkey-16l2.16	58	95.041	ENSFHEG00000000767	si:dkey-16l2.16	78	95.041	Fundulus_heteroclitus
ENSCVAG00000003537	si:dkey-16l2.16	77	83.851	ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	Gadus_morhua
ENSCVAG00000003537	si:dkey-16l2.16	100	91.388	ENSGAFG00000005388	si:dkey-16l2.16	100	91.388	Gambusia_affinis
ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	ENSGACG00000014915	si:dkey-16l2.16	98	92.344	Gasterosteus_aculeatus
ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	ENSHBUG00000019261	si:dkey-16l2.16	100	94.737	Haplochromis_burtoni
ENSCVAG00000003537	si:dkey-16l2.16	100	92.823	ENSHCOG00000006538	si:dkey-16l2.16	100	92.823	Hippocampus_comes
ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	ENSKMAG00000003494	si:dkey-16l2.16	100	92.344	Kryptolebias_marmoratus
ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	ENSLBEG00000007681	si:dkey-16l2.16	100	94.737	Labrus_bergylta
ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	ENSMAMG00000019230	si:dkey-16l2.16	100	94.737	Mastacembelus_armatus
ENSCVAG00000003537	si:dkey-16l2.16	100	94.258	ENSMZEG00005002081	si:dkey-16l2.16	100	94.258	Maylandia_zebra
ENSCVAG00000003537	si:dkey-16l2.16	99	95.631	ENSMMOG00000020140	si:dkey-16l2.16	97	95.631	Mola_mola
ENSCVAG00000003537	si:dkey-16l2.16	100	93.301	ENSMALG00000014727	si:dkey-16l2.16	99	93.301	Monopterus_albus
ENSCVAG00000003537	si:dkey-16l2.16	100	93.780	ENSNBRG00000008930	si:dkey-16l2.16	100	93.780	Neolamprologus_brichardi
ENSCVAG00000003537	si:dkey-16l2.16	100	94.258	ENSONIG00000009443	si:dkey-16l2.16	100	94.258	Oreochromis_niloticus
ENSCVAG00000003537	si:dkey-16l2.16	100	90.431	ENSORLG00000001098	si:dkey-16l2.16	99	90.431	Oryzias_latipes
ENSCVAG00000003537	si:dkey-16l2.16	100	90.431	ENSORLG00020000867	si:dkey-16l2.16	99	90.431	Oryzias_latipes_hni
ENSCVAG00000003537	si:dkey-16l2.16	100	87.560	ENSOMEG00000015474	si:dkey-16l2.16	100	87.560	Oryzias_melastigma
ENSCVAG00000003537	si:dkey-16l2.16	100	78.947	ENSPKIG00000018888	si:dkey-16l2.16	94	81.633	Paramormyrops_kingsleyae
ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	ENSPKIG00000005686	-	100	91.866	Paramormyrops_kingsleyae
ENSCVAG00000003537	si:dkey-16l2.16	100	93.780	ENSPMGG00000000751	si:dkey-16l2.16	100	93.780	Periophthalmus_magnuspinnatus
ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	ENSPFOG00000004746	si:dkey-16l2.16	100	92.344	Poecilia_formosa
ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	ENSPLAG00000021043	si:dkey-16l2.16	100	91.866	Poecilia_latipinna
ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	ENSPMEG00000007165	si:dkey-16l2.16	100	92.344	Poecilia_mexicana
ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	ENSPREG00000005323	si:dkey-16l2.16	100	91.866	Poecilia_reticulata
ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	ENSPNYG00000009490	si:dkey-16l2.16	100	94.737	Pundamilia_nyererei
ENSCVAG00000003537	si:dkey-16l2.16	100	93.301	ENSPNAG00000018986	si:dkey-16l2.16	100	93.301	Pygocentrus_nattereri
ENSCVAG00000003537	si:dkey-16l2.16	100	91.388	ENSSFOG00015021448	-	100	91.388	Scleropages_formosus
ENSCVAG00000003537	si:dkey-16l2.16	99	81.250	ENSSFOG00015006414	-	93	78.571	Scleropages_formosus
ENSCVAG00000003537	si:dkey-16l2.16	100	90.909	ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	Scophthalmus_maximus
ENSCVAG00000003537	si:dkey-16l2.16	100	96.651	ENSSDUG00000005719	si:dkey-16l2.16	100	96.651	Seriola_dumerili
ENSCVAG00000003537	si:dkey-16l2.16	100	96.651	ENSSLDG00000003631	si:dkey-16l2.16	100	96.651	Seriola_lalandi_dorsalis
ENSCVAG00000003537	si:dkey-16l2.16	100	95.215	ENSSPAG00000006302	si:dkey-16l2.16	100	95.215	Stegastes_partitus
ENSCVAG00000003537	si:dkey-16l2.16	100	93.780	ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	Takifugu_rubripes
ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	Tetraodon_nigroviridis
ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	ENSXMAG00000021767	si:dkey-16l2.16	100	91.866	Xiphophorus_maculatus