EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003556 (Gene tree)
Gene ID: -
Gene Symbol: raly (1 of many)
Alias: zgc:103445
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4546 bases
Position: chrKL654460.1:49224-53769
Accession: ZDB-GENE-041010-127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002455	RRM_1	PF00076.22	7.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011697	-	345	-	ENSCVAP00000002455	114 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003556	raly	57	35.385	ENSCVAG00000001863	SRSF6	63	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003556	raly	70	86.250	ENSG00000125970	RALY	90	86.250	Homo_sapiens
ENSCVAG00000003556	raly	70	88.750	ENSFDAG00000010175	RALY	94	88.750	Fukomys_damarensis
ENSCVAG00000003556	raly	70	88.750	ENSHGLG00100003933	RALY	57	88.750	Heterocephalus_glaber_male
ENSCVAG00000003556	raly	70	87.500	ENSJJAG00000008473	Raly	57	87.500	Jaculus_jaculus
ENSCVAG00000003556	raly	75	90.698	ENSLBEG00000028617	raly	95	90.698	Labrus_bergylta
ENSCVAG00000003556	raly	70	90.000	MGP_CAROLIEiJ_G0024519	Raly	57	90.000	Mus_caroli
ENSCVAG00000003556	raly	70	90.000	ENSMUSG00000027593	Raly	57	90.000	Mus_musculus
ENSCVAG00000003556	raly	70	90.000	MGP_PahariEiJ_G0025963	Raly	57	90.000	Mus_pahari
ENSCVAG00000003556	raly	70	90.000	MGP_SPRETEiJ_G0025441	Raly	57	90.000	Mus_spretus
ENSCVAG00000003556	raly	70	87.500	ENSPMGG00000007007	raly	74	87.500	Periophthalmus_magnuspinnatus
ENSCVAG00000003556	raly	67	69.737	ENSPCIG00000014019	-	85	69.737	Phascolarctos_cinereus
ENSCVAG00000003556	raly	72	96.341	ENSSLDG00000004903	RALY	82	96.341	Seriola_lalandi_dorsalis