EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003624 (Gene tree)
Gene ID: -
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: 2'%2C5'-phosphodiesterase 12-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8309 bases
Position: chrKL653240.1:138202-146510
Accession: 107097999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021520	Exo_endo_phos	PF03372.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011583	-	1554	XM_015395420	ENSCVAP00000021520	517 (aa)	XP_015250906	-

Gene Model

Click here to download ENSCVAG00000003624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003624	pde12	94	49.398	ENSG00000174840	PDE12	95	49.741	Homo_sapiens
ENSCVAG00000003624	pde12	99	66.667	ENSAPOG00000018806	pde12	99	64.310	Acanthochromis_polyacanthus
ENSCVAG00000003624	pde12	94	48.443	ENSAMEG00000011802	PDE12	99	48.763	Ailuropoda_melanoleuca
ENSCVAG00000003624	pde12	100	61.356	ENSACIG00000014918	pde12	100	61.356	Amphilophus_citrinellus
ENSCVAG00000003624	pde12	99	61.525	ENSAOCG00000016376	pde12	99	61.525	Amphiprion_ocellaris
ENSCVAG00000003624	pde12	99	62.116	ENSAPEG00000000756	pde12	99	62.116	Amphiprion_percula
ENSCVAG00000003624	pde12	100	64.736	ENSATEG00000003072	pde12	100	64.736	Anabas_testudineus
ENSCVAG00000003624	pde12	85	61.074	ENSACAG00000003067	PDE12	77	61.074	Anolis_carolinensis
ENSCVAG00000003624	pde12	97	48.241	ENSANAG00000011815	PDE12	98	48.235	Aotus_nancymaae
ENSCVAG00000003624	pde12	93	84.314	ENSACLG00000010127	pde12	82	84.314	Astatotilapia_calliptera
ENSCVAG00000003624	pde12	94	52.951	ENSAMXG00000020765	pde12	96	53.553	Astyanax_mexicanus
ENSCVAG00000003624	pde12	94	49.741	ENSBTAG00000015563	PDE12	95	49.225	Bos_taurus
ENSCVAG00000003624	pde12	97	48.074	ENSCJAG00000019905	PDE12	98	48.744	Callithrix_jacchus
ENSCVAG00000003624	pde12	93	48.021	ENSCAFG00000007792	PDE12	94	48.542	Canis_familiaris
ENSCVAG00000003624	pde12	93	48.021	ENSCAFG00020006692	PDE12	94	48.376	Canis_lupus_dingo
ENSCVAG00000003624	pde12	94	49.658	ENSCHIG00000014202	PDE12	95	49.228	Capra_hircus
ENSCVAG00000003624	pde12	93	48.180	ENSTSYG00000025750	PDE12	95	48.187	Carlito_syrichta
ENSCVAG00000003624	pde12	94	49.053	ENSCPOG00000001620	PDE12	95	49.053	Cavia_porcellus
ENSCVAG00000003624	pde12	97	47.928	ENSCCAG00000031290	PDE12	97	47.928	Cebus_capucinus
ENSCVAG00000003624	pde12	94	49.138	ENSCATG00000044539	PDE12	95	49.223	Cercocebus_atys
ENSCVAG00000003624	pde12	93	46.620	ENSCLAG00000004864	PDE12	95	47.414	Chinchilla_lanigera
ENSCVAG00000003624	pde12	94	49.310	ENSCSAG00000012275	PDE12	95	49.481	Chlorocebus_sabaeus
ENSCVAG00000003624	pde12	82	50.273	ENSCHOG00000002188	-	83	50.136	Choloepus_hoffmanni
ENSCVAG00000003624	pde12	61	50.518	ENSCHOG00000012173	-	93	50.388	Choloepus_hoffmanni
ENSCVAG00000003624	pde12	94	48.227	ENSCPBG00000012353	PDE12	91	48.142	Chrysemys_picta_bellii
ENSCVAG00000003624	pde12	84	42.857	ENSCING00000006903	-	80	42.857	Ciona_intestinalis
ENSCVAG00000003624	pde12	94	49.570	ENSCANG00000038723	PDE12	95	49.741	Colobus_angolensis_palliatus
ENSCVAG00000003624	pde12	93	47.569	ENSCGRG00001021836	Pde12	95	47.751	Cricetulus_griseus_chok1gshd
ENSCVAG00000003624	pde12	93	47.561	ENSCGRG00000012319	Pde12	95	47.652	Cricetulus_griseus_crigri
ENSCVAG00000003624	pde12	94	62.791	ENSCSEG00000018538	pde12	100	62.791	Cynoglossus_semilaevis
ENSCVAG00000003624	pde12	90	60.063	ENSDARG00000030964	pde12	78	60.000	Danio_rerio
ENSCVAG00000003624	pde12	94	47.432	ENSDNOG00000048413	PDE12	95	48.116	Dasypus_novemcinctus
ENSCVAG00000003624	pde12	93	48.187	ENSDORG00000004313	Pde12	96	47.885	Dipodomys_ordii
ENSCVAG00000003624	pde12	91	36.898	FBgn0051759	CG31759	66	37.624	Drosophila_melanogaster
ENSCVAG00000003624	pde12	78	42.718	ENSEBUG00000004803	pde12	72	42.718	Eptatretus_burgeri
ENSCVAG00000003624	pde12	94	48.359	ENSEASG00005000644	PDE12	95	48.537	Equus_asinus_asinus
ENSCVAG00000003624	pde12	94	48.532	ENSECAG00000005326	PDE12	95	48.709	Equus_caballus
ENSCVAG00000003624	pde12	57	61.589	ENSEEUG00000010406	-	50	61.184	Erinaceus_europaeus
ENSCVAG00000003624	pde12	98	61.934	ENSELUG00000014391	pde12	86	61.934	Esox_lucius
ENSCVAG00000003624	pde12	93	48.448	ENSFCAG00000031696	PDE12	95	48.621	Felis_catus
ENSCVAG00000003624	pde12	78	48.847	ENSFALG00000008401	PDE12	99	48.963	Ficedula_albicollis
ENSCVAG00000003624	pde12	94	48.625	ENSFDAG00000021278	PDE12	95	48.454	Fukomys_damarensis
ENSCVAG00000003624	pde12	92	67.450	ENSFHEG00000018967	pde12	91	67.384	Fundulus_heteroclitus
ENSCVAG00000003624	pde12	88	70.588	ENSGMOG00000018041	pde12	81	70.588	Gadus_morhua
ENSCVAG00000003624	pde12	93	49.821	ENSGALG00000052355	PDE12	95	49.104	Gallus_gallus
ENSCVAG00000003624	pde12	99	65.593	ENSGAFG00000002045	pde12	99	65.816	Gambusia_affinis
ENSCVAG00000003624	pde12	100	62.963	ENSGACG00000003914	pde12	100	62.963	Gasterosteus_aculeatus
ENSCVAG00000003624	pde12	94	48.227	ENSGAGG00000010266	PDE12	92	48.142	Gopherus_agassizii
ENSCVAG00000003624	pde12	99	47.783	ENSGGOG00000003312	PDE12	99	48.105	Gorilla_gorilla
ENSCVAG00000003624	pde12	93	84.516	ENSHBUG00000023370	pde12	82	84.314	Haplochromis_burtoni
ENSCVAG00000003624	pde12	94	48.110	ENSHGLG00000005661	PDE12	95	48.454	Heterocephalus_glaber_female
ENSCVAG00000003624	pde12	94	48.282	ENSHGLG00100001136	PDE12	95	48.454	Heterocephalus_glaber_male
ENSCVAG00000003624	pde12	98	57.504	ENSHCOG00000013749	pde12	98	57.504	Hippocampus_comes
ENSCVAG00000003624	pde12	87	64.901	ENSIPUG00000007123	Pde12	94	52.158	Ictalurus_punctatus
ENSCVAG00000003624	pde12	97	46.901	ENSSTOG00000007861	PDE12	98	47.078	Ictidomys_tridecemlineatus
ENSCVAG00000003624	pde12	93	47.766	ENSJJAG00000006038	Pde12	94	47.684	Jaculus_jaculus
ENSCVAG00000003624	pde12	99	66.159	ENSKMAG00000018523	pde12	99	66.159	Kryptolebias_marmoratus
ENSCVAG00000003624	pde12	96	61.724	ENSLBEG00000026775	pde12	100	61.628	Labrus_bergylta
ENSCVAG00000003624	pde12	95	66.491	ENSLBEG00000009762	PDE12	100	65.833	Labrus_bergylta
ENSCVAG00000003624	pde12	93	52.527	ENSLACG00000015492	PDE12	94	52.527	Latimeria_chalumnae
ENSCVAG00000003624	pde12	94	48.043	ENSLOCG00000013277	pde12	94	48.135	Lepisosteus_oculatus
ENSCVAG00000003624	pde12	91	47.080	ENSLAFG00000002821	PDE12	100	47.965	Loxodonta_africana
ENSCVAG00000003624	pde12	94	49.398	ENSMFAG00000030966	PDE12	95	49.568	Macaca_fascicularis
ENSCVAG00000003624	pde12	94	49.398	ENSMMUG00000004052	PDE12	95	49.568	Macaca_mulatta
ENSCVAG00000003624	pde12	94	49.398	ENSMNEG00000030068	PDE12	95	49.568	Macaca_nemestrina
ENSCVAG00000003624	pde12	94	49.398	ENSMLEG00000036137	PDE12	95	49.568	Mandrillus_leucophaeus
ENSCVAG00000003624	pde12	93	83.007	ENSMAMG00000014415	pde12	100	64.865	Mastacembelus_armatus
ENSCVAG00000003624	pde12	88	84.314	ENSMZEG00005028202	-	80	84.314	Maylandia_zebra
ENSCVAG00000003624	pde12	93	84.314	ENSMZEG00005016132	pde12	82	84.314	Maylandia_zebra
ENSCVAG00000003624	pde12	93	46.996	ENSMAUG00000000442	Pde12	95	46.384	Mesocricetus_auratus
ENSCVAG00000003624	pde12	93	48.270	ENSMICG00000005723	PDE12	95	48.276	Microcebus_murinus
ENSCVAG00000003624	pde12	93	49.033	ENSMOCG00000020734	Pde12	95	49.649	Microtus_ochrogaster
ENSCVAG00000003624	pde12	96	65.079	ENSMMOG00000013636	pde12	100	65.136	Mola_mola
ENSCVAG00000003624	pde12	93	45.899	ENSMODG00000000155	PDE12	95	45.899	Monodelphis_domestica
ENSCVAG00000003624	pde12	93	81.699	ENSMALG00000022647	pde12	81	81.699	Monopterus_albus
ENSCVAG00000003624	pde12	93	48.532	MGP_CAROLIEiJ_G0019032	Pde12	95	47.668	Mus_caroli
ENSCVAG00000003624	pde12	93	48.881	ENSMUSG00000043702	Pde12	95	48.014	Mus_musculus
ENSCVAG00000003624	pde12	93	48.877	MGP_PahariEiJ_G0030049	Pde12	95	47.841	Mus_pahari
ENSCVAG00000003624	pde12	93	48.709	MGP_SPRETEiJ_G0019916	Pde12	95	47.841	Mus_spretus
ENSCVAG00000003624	pde12	94	47.668	ENSMPUG00000016869	PDE12	95	48.021	Mustela_putorius_furo
ENSCVAG00000003624	pde12	93	47.751	ENSMLUG00000026487	PDE12	95	48.014	Myotis_lucifugus
ENSCVAG00000003624	pde12	96	48.199	ENSNGAG00000001228	Pde12	98	47.716	Nannospalax_galili
ENSCVAG00000003624	pde12	99	62.326	ENSNBRG00000015769	pde12	69	62.326	Neolamprologus_brichardi
ENSCVAG00000003624	pde12	99	47.533	ENSNLEG00000007269	-	95	49.396	Nomascus_leucogenys
ENSCVAG00000003624	pde12	99	44.754	ENSNLEG00000034833	-	99	45.561	Nomascus_leucogenys
ENSCVAG00000003624	pde12	93	46.223	ENSMEUG00000006786	PDE12	94	46.691	Notamacropus_eugenii
ENSCVAG00000003624	pde12	94	47.766	ENSOPRG00000015273	PDE12	95	48.625	Ochotona_princeps
ENSCVAG00000003624	pde12	93	48.258	ENSODEG00000006268	PDE12	96	48.223	Octodon_degus
ENSCVAG00000003624	pde12	86	83.553	ENSONIG00000004293	pde12	81	83.553	Oreochromis_niloticus
ENSCVAG00000003624	pde12	79	55.263	ENSOANG00000012885	PDE12	80	55.263	Ornithorhynchus_anatinus
ENSCVAG00000003624	pde12	93	48.348	ENSOCUG00000000823	PDE12	95	48.103	Oryctolagus_cuniculus
ENSCVAG00000003624	pde12	99	62.287	ENSORLG00000017444	pde12	99	62.116	Oryzias_latipes
ENSCVAG00000003624	pde12	99	61.224	ENSORLG00020010469	pde12	99	61.054	Oryzias_latipes_hni
ENSCVAG00000003624	pde12	92	79.739	ENSORLG00015004093	pde12	81	79.739	Oryzias_latipes_hsok
ENSCVAG00000003624	pde12	93	80.392	ENSOMEG00000020900	pde12	82	80.392	Oryzias_melastigma
ENSCVAG00000003624	pde12	94	48.537	ENSOGAG00000024093	PDE12	95	48.103	Otolemur_garnettii
ENSCVAG00000003624	pde12	89	49.097	ENSOARG00000013642	PDE12	100	48.654	Ovis_aries
ENSCVAG00000003624	pde12	99	47.455	ENSPPAG00000034712	PDE12	99	47.776	Pan_paniscus
ENSCVAG00000003624	pde12	93	48.276	ENSPPRG00000011738	PDE12	95	48.621	Panthera_pardus
ENSCVAG00000003624	pde12	80	48.419	ENSPTIG00000019166	PDE12	95	48.907	Panthera_tigris_altaica
ENSCVAG00000003624	pde12	99	47.619	ENSPTRG00000030221	PDE12	95	49.568	Pan_troglodytes
ENSCVAG00000003624	pde12	94	49.225	ENSPANG00000007324	PDE12	95	49.396	Papio_anubis
ENSCVAG00000003624	pde12	87	65.132	ENSPKIG00000025354	pde12	77	65.132	Paramormyrops_kingsleyae
ENSCVAG00000003624	pde12	94	49.027	ENSPSIG00000004926	PDE12	92	49.027	Pelodiscus_sinensis
ENSCVAG00000003624	pde12	92	71.242	ENSPMGG00000006742	pde12	80	71.242	Periophthalmus_magnuspinnatus
ENSCVAG00000003624	pde12	79	48.687	ENSPEMG00000007259	Pde12	93	48.687	Peromyscus_maniculatus_bairdii
ENSCVAG00000003624	pde12	92	88.000	ENSPFOG00000011864	pde12	81	88.000	Poecilia_formosa
ENSCVAG00000003624	pde12	70	62.500	ENSPLAG00000023871	pde12	81	62.500	Poecilia_latipinna
ENSCVAG00000003624	pde12	93	86.842	ENSPMEG00000005674	pde12	82	86.842	Poecilia_mexicana
ENSCVAG00000003624	pde12	93	86.184	ENSPREG00000022831	pde12	82	86.184	Poecilia_reticulata
ENSCVAG00000003624	pde12	99	47.862	ENSPPYG00000013769	PDE12	99	48.185	Pongo_abelii
ENSCVAG00000003624	pde12	93	47.751	ENSPCOG00000026004	PDE12	95	47.931	Propithecus_coquereli
ENSCVAG00000003624	pde12	94	48.342	ENSPVAG00000008885	PDE12	95	48.522	Pteropus_vampyrus
ENSCVAG00000003624	pde12	93	84.314	ENSPNYG00000013258	pde12	82	84.314	Pundamilia_nyererei
ENSCVAG00000003624	pde12	94	55.993	ENSPNAG00000029032	pde12	96	56.429	Pygocentrus_nattereri
ENSCVAG00000003624	pde12	97	48.571	ENSRNOG00000059442	Pde12	97	47.899	Rattus_norvegicus
ENSCVAG00000003624	pde12	94	49.396	ENSRBIG00000040704	PDE12	95	49.396	Rhinopithecus_bieti
ENSCVAG00000003624	pde12	94	49.396	ENSRROG00000031279	PDE12	95	49.396	Rhinopithecus_roxellana
ENSCVAG00000003624	pde12	93	49.215	ENSSBOG00000023974	PDE12	94	49.653	Saimiri_boliviensis_boliviensis
ENSCVAG00000003624	pde12	72	81.013	ENSSFOG00015003468	pde12	68	81.013	Scleropages_formosus
ENSCVAG00000003624	pde12	94	63.102	ENSSMAG00000003258	pde12	96	63.316	Scophthalmus_maximus
ENSCVAG00000003624	pde12	100	65.372	ENSSDUG00000020470	pde12	100	65.372	Seriola_dumerili
ENSCVAG00000003624	pde12	100	63.714	ENSSLDG00000019833	pde12	100	63.714	Seriola_lalandi_dorsalis
ENSCVAG00000003624	pde12	93	48.252	ENSSARG00000007201	PDE12	95	48.168	Sorex_araneus
ENSCVAG00000003624	pde12	97	65.693	ENSSPAG00000014980	pde12	99	64.831	Stegastes_partitus
ENSCVAG00000003624	pde12	94	47.578	ENSSSCG00000011465	-	95	48.193	Sus_scrofa
ENSCVAG00000003624	pde12	58	48.387	ENSTGUG00000007290	PDE12	100	48.387	Taeniopygia_guttata
ENSCVAG00000003624	pde12	100	60.884	ENSTRUG00000005159	pde12	99	61.083	Takifugu_rubripes
ENSCVAG00000003624	pde12	99	59.322	ENSTNIG00000017497	pde12	99	59.322	Tetraodon_nigroviridis
ENSCVAG00000003624	pde12	72	46.732	ENSTBEG00000008202	PDE12	75	46.732	Tupaia_belangeri
ENSCVAG00000003624	pde12	94	48.532	ENSTTRG00000014707	PDE12	95	48.881	Tursiops_truncatus
ENSCVAG00000003624	pde12	93	48.700	ENSUAMG00000020634	-	95	48.709	Ursus_americanus
ENSCVAG00000003624	pde12	68	41.476	ENSUAMG00000008368	-	85	41.772	Ursus_americanus
ENSCVAG00000003624	pde12	69	49.657	ENSUMAG00000021906	PDE12	100	49.773	Ursus_maritimus
ENSCVAG00000003624	pde12	93	48.789	ENSVVUG00000020335	PDE12	93	48.714	Vulpes_vulpes
ENSCVAG00000003624	pde12	94	40.721	ENSXETG00000008653	pde12	97	40.721	Xenopus_tropicalis
ENSCVAG00000003624	pde12	94	69.643	ENSXCOG00000000407	pde12	98	69.643	Xiphophorus_couchianus
ENSCVAG00000003624	pde12	99	70.408	ENSXMAG00000013370	pde12	100	70.408	Xiphophorus_maculatus