EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4099 bases
Position: chrKL652851.1:133059-137157
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002610	PARP	PF00644.20	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011425	-	486	-	ENSCVAP00000002610	161 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003727	-	83	65.672	ENSCVAG00000003718	-	89	65.672
ENSCVAG00000003727	-	78	57.812	ENSCVAG00000006821	gig2p	71	60.833
ENSCVAG00000003727	-	83	50.370	ENSCVAG00000006837	gig2p	65	50.370
ENSCVAG00000003727	-	88	80.851	ENSCVAG00000014970	-	85	80.851
ENSCVAG00000003727	-	73	86.325	ENSCVAG00000003747	-	81	86.325
ENSCVAG00000003727	-	72	72.414	ENSCVAG00000003734	-	85	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003727	-	78	71.200	ENSAPOG00000010161	-	78	71.200	Acanthochromis_polyacanthus
ENSCVAG00000003727	-	88	70.922	ENSACIG00000018444	-	86	70.922	Amphilophus_citrinellus
ENSCVAG00000003727	-	88	66.667	ENSAOCG00000010913	-	93	66.667	Amphiprion_ocellaris
ENSCVAG00000003727	-	88	65.248	ENSAOCG00000022027	-	82	68.992	Amphiprion_ocellaris
ENSCVAG00000003727	-	88	66.667	ENSAOCG00000022001	-	93	66.667	Amphiprion_ocellaris
ENSCVAG00000003727	-	87	64.286	ENSAPEG00000005707	-	83	67.969	Amphiprion_percula
ENSCVAG00000003727	-	88	66.667	ENSAPEG00000005732	-	93	66.667	Amphiprion_percula
ENSCVAG00000003727	-	75	66.942	ENSAPEG00000005698	-	71	66.942	Amphiprion_percula
ENSCVAG00000003727	-	74	74.797	ENSATEG00000019359	-	73	75.410	Anabas_testudineus
ENSCVAG00000003727	-	84	70.588	ENSACLG00000019059	-	97	70.588	Astatotilapia_calliptera
ENSCVAG00000003727	-	83	52.206	ENSELUG00000017332	-	88	54.545	Esox_lucius
ENSCVAG00000003727	-	87	75.714	ENSFHEG00000017157	-	84	75.714	Fundulus_heteroclitus
ENSCVAG00000003727	-	80	77.344	ENSFHEG00000017170	-	83	74.820	Fundulus_heteroclitus
ENSCVAG00000003727	-	81	70.000	ENSFHEG00000017166	-	77	70.000	Fundulus_heteroclitus
ENSCVAG00000003727	-	73	61.475	ENSGMOG00000020063	-	86	61.475	Gadus_morhua
ENSCVAG00000003727	-	75	61.111	ENSGMOG00000020583	-	100	61.111	Gadus_morhua
ENSCVAG00000003727	-	78	66.154	ENSGMOG00000013817	-	86	66.154	Gadus_morhua
ENSCVAG00000003727	-	65	62.037	ENSGMOG00000020613	-	84	62.037	Gadus_morhua
ENSCVAG00000003727	-	78	65.385	ENSGMOG00000019914	-	87	65.385	Gadus_morhua
ENSCVAG00000003727	-	78	62.879	ENSGMOG00000019928	-	87	62.879	Gadus_morhua
ENSCVAG00000003727	-	73	68.033	ENSGMOG00000020321	-	86	68.033	Gadus_morhua
ENSCVAG00000003727	-	75	62.992	ENSGMOG00000020414	-	99	62.992	Gadus_morhua
ENSCVAG00000003727	-	84	70.370	ENSGAFG00000005347	-	84	70.370	Gambusia_affinis
ENSCVAG00000003727	-	60	76.042	ENSGAFG00000004666	-	80	76.042	Gambusia_affinis
ENSCVAG00000003727	-	80	66.667	ENSGACG00000014936	-	86	67.939	Gasterosteus_aculeatus
ENSCVAG00000003727	-	88	68.085	ENSHBUG00000018905	-	86	68.841	Haplochromis_burtoni
ENSCVAG00000003727	-	82	63.971	ENSHCOG00000006694	-	80	64.615	Hippocampus_comes
ENSCVAG00000003727	-	78	73.810	ENSKMAG00000004246	-	79	73.810	Kryptolebias_marmoratus
ENSCVAG00000003727	-	72	70.833	ENSLBEG00000007243	-	90	70.833	Labrus_bergylta
ENSCVAG00000003727	-	76	69.048	ENSLBEG00000010100	-	79	70.492	Labrus_bergylta
ENSCVAG00000003727	-	66	68.182	ENSLBEG00000007220	-	62	68.182	Labrus_bergylta
ENSCVAG00000003727	-	81	69.403	ENSLBEG00000010046	-	83	70.769	Labrus_bergylta
ENSCVAG00000003727	-	87	64.828	ENSLBEG00000010115	-	86	64.828	Labrus_bergylta
ENSCVAG00000003727	-	83	60.000	ENSLBEG00000007190	-	91	54.676	Labrus_bergylta
ENSCVAG00000003727	-	89	65.541	ENSMAMG00000019358	-	85	66.667	Mastacembelus_armatus
ENSCVAG00000003727	-	80	74.219	ENSMZEG00005002337	-	82	74.219	Maylandia_zebra
ENSCVAG00000003727	-	89	70.833	ENSMZEG00005002350	-	86	71.631	Maylandia_zebra
ENSCVAG00000003727	-	75	79.339	ENSMMOG00000020156	-	81	77.600	Mola_mola
ENSCVAG00000003727	-	87	71.429	ENSMMOG00000020157	-	84	77.600	Mola_mola
ENSCVAG00000003727	-	97	66.667	ENSMMOG00000020154	-	85	73.333	Mola_mola
ENSCVAG00000003727	-	80	62.791	ENSMALG00000014591	-	78	62.791	Monopterus_albus
ENSCVAG00000003727	-	68	63.717	ENSMALG00000021097	-	81	68.317	Monopterus_albus
ENSCVAG00000003727	-	80	78.125	ENSNBRG00000009079	-	79	78.125	Neolamprologus_brichardi
ENSCVAG00000003727	-	89	65.753	ENSNBRG00000009099	-	87	66.434	Neolamprologus_brichardi
ENSCVAG00000003727	-	80	78.906	ENSONIG00000021378	-	85	78.906	Oreochromis_niloticus
ENSCVAG00000003727	-	88	67.376	ENSONIG00000009459	-	86	67.376	Oreochromis_niloticus
ENSCVAG00000003727	-	75	70.000	ENSORLG00000001055	-	75	70.000	Oryzias_latipes
ENSCVAG00000003727	-	78	69.048	ENSOMEG00000015296	-	56	68.504	Oryzias_melastigma
ENSCVAG00000003727	-	78	70.400	ENSOMEG00000015284	-	79	70.400	Oryzias_melastigma
ENSCVAG00000003727	-	89	64.583	ENSPMGG00000017877	-	82	65.714	Periophthalmus_magnuspinnatus
ENSCVAG00000003727	-	83	65.414	ENSPMGG00000017878	-	82	65.414	Periophthalmus_magnuspinnatus
ENSCVAG00000003727	-	78	72.800	ENSPFOG00000020434	-	86	72.800	Poecilia_formosa
ENSCVAG00000003727	-	78	80.159	ENSPLAG00000020837	-	78	80.159	Poecilia_latipinna
ENSCVAG00000003727	-	81	72.308	ENSPLAG00000014302	-	82	72.093	Poecilia_latipinna
ENSCVAG00000003727	-	81	74.809	ENSPMEG00000011183	-	67	74.242	Poecilia_mexicana
ENSCVAG00000003727	-	78	77.778	ENSPREG00000013691	-	82	77.778	Poecilia_reticulata
ENSCVAG00000003727	-	84	70.803	ENSSMAG00000014601	-	84	70.803	Scophthalmus_maximus
ENSCVAG00000003727	-	71	74.561	ENSSMAG00000014710	-	76	73.810	Scophthalmus_maximus
ENSCVAG00000003727	-	81	69.466	ENSSMAG00000014637	-	90	70.000	Scophthalmus_maximus
ENSCVAG00000003727	-	89	65.734	ENSSDUG00000012574	-	80	70.543	Seriola_dumerili
ENSCVAG00000003727	-	79	69.466	ENSSDUG00000006287	-	78	69.466	Seriola_dumerili
ENSCVAG00000003727	-	89	67.133	ENSSLDG00000013905	-	79	71.318	Seriola_lalandi_dorsalis
ENSCVAG00000003727	-	80	68.939	ENSSLDG00000012388	-	77	68.939	Seriola_lalandi_dorsalis
ENSCVAG00000003727	-	83	66.418	ENSSPAG00000005395	-	82	70.492	Stegastes_partitus
ENSCVAG00000003727	-	88	64.336	ENSSPAG00000005387	-	82	64.336	Stegastes_partitus
ENSCVAG00000003727	-	78	68.800	ENSTRUG00000025007	-	81	68.800	Takifugu_rubripes
ENSCVAG00000003727	-	80	70.543	ENSTRUG00000023048	-	86	72.000	Takifugu_rubripes
ENSCVAG00000003727	-	80	70.543	ENSTRUG00000024239	-	87	72.000	Takifugu_rubripes
ENSCVAG00000003727	-	79	68.504	ENSTRUG00000020594	-	77	69.919	Takifugu_rubripes
ENSCVAG00000003727	-	80	75.194	ENSXCOG00000018144	-	89	75.194	Xiphophorus_couchianus
ENSCVAG00000003727	-	76	75.200	ENSXCOG00000000142	-	78	75.200	Xiphophorus_couchianus
ENSCVAG00000003727	-	80	72.093	ENSXMAG00000023121	-	88	72.093	Xiphophorus_maculatus
ENSCVAG00000003727	-	80	75.969	ENSXMAG00000019489	-	82	75.969	Xiphophorus_maculatus