EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003747 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2723 bases
Position: chrKL652851.1:102194-104916
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021592	PARP	PF00644.20	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011401	-	438	-	ENSCVAP00000021592	145 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003747	-	95	81.159	ENSCVAG00000014970	-	84	81.159
ENSCVAG00000003747	-	80	70.690	ENSCVAG00000003734	-	85	70.690
ENSCVAG00000003747	-	86	56.250	ENSCVAG00000006837	gig2p	62	56.250
ENSCVAG00000003747	-	81	86.325	ENSCVAG00000003727	-	73	86.325
ENSCVAG00000003747	-	83	56.557	ENSCVAG00000006821	gig2p	73	56.557
ENSCVAG00000003747	-	87	65.079	ENSCVAG00000003718	-	83	65.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003747	-	95	71.014	ENSAPOG00000010161	-	86	71.014	Acanthochromis_polyacanthus
ENSCVAG00000003747	-	95	70.290	ENSACIG00000018444	-	85	70.290	Amphilophus_citrinellus
ENSCVAG00000003747	-	95	68.841	ENSAOCG00000022027	-	87	68.841	Amphiprion_ocellaris
ENSCVAG00000003747	-	83	68.333	ENSAOCG00000010913	-	81	68.333	Amphiprion_ocellaris
ENSCVAG00000003747	-	83	68.333	ENSAOCG00000022001	-	81	68.333	Amphiprion_ocellaris
ENSCVAG00000003747	-	99	66.438	ENSAPEG00000005698	-	85	66.438	Amphiprion_percula
ENSCVAG00000003747	-	83	68.333	ENSAPEG00000005732	-	81	68.333	Amphiprion_percula
ENSCVAG00000003747	-	95	68.841	ENSAPEG00000005707	-	89	68.841	Amphiprion_percula
ENSCVAG00000003747	-	95	70.423	ENSATEG00000019359	-	86	70.423	Anabas_testudineus
ENSCVAG00000003747	-	79	71.930	ENSACLG00000019059	-	83	71.930	Astatotilapia_calliptera
ENSCVAG00000003747	-	88	51.163	ENSELUG00000017332	-	87	51.163	Esox_lucius
ENSCVAG00000003747	-	95	76.812	ENSFHEG00000017170	-	83	76.812	Fundulus_heteroclitus
ENSCVAG00000003747	-	95	76.087	ENSFHEG00000017157	-	84	76.087	Fundulus_heteroclitus
ENSCVAG00000003747	-	93	66.667	ENSFHEG00000017166	-	83	66.667	Fundulus_heteroclitus
ENSCVAG00000003747	-	95	62.676	ENSGMOG00000019914	-	95	62.676	Gadus_morhua
ENSCVAG00000003747	-	95	61.268	ENSGMOG00000013817	-	95	61.268	Gadus_morhua
ENSCVAG00000003747	-	79	61.667	ENSGMOG00000020583	-	95	61.667	Gadus_morhua
ENSCVAG00000003747	-	94	61.429	ENSGMOG00000020321	-	99	61.429	Gadus_morhua
ENSCVAG00000003747	-	85	57.480	ENSGMOG00000020613	-	99	57.480	Gadus_morhua
ENSCVAG00000003747	-	94	57.857	ENSGMOG00000020063	-	99	57.857	Gadus_morhua
ENSCVAG00000003747	-	95	60.417	ENSGMOG00000019928	-	95	60.417	Gadus_morhua
ENSCVAG00000003747	-	79	62.810	ENSGMOG00000020414	-	95	62.810	Gadus_morhua
ENSCVAG00000003747	-	95	72.464	ENSGAFG00000005347	-	86	72.464	Gambusia_affinis
ENSCVAG00000003747	-	79	78.261	ENSGAFG00000004666	-	96	78.261	Gambusia_affinis
ENSCVAG00000003747	-	95	63.889	ENSGACG00000014936	-	95	63.889	Gasterosteus_aculeatus
ENSCVAG00000003747	-	95	68.116	ENSHBUG00000018905	-	86	68.116	Haplochromis_burtoni
ENSCVAG00000003747	-	95	63.380	ENSHCOG00000006694	-	88	63.380	Hippocampus_comes
ENSCVAG00000003747	-	95	68.841	ENSKMAG00000004246	-	86	68.841	Kryptolebias_marmoratus
ENSCVAG00000003747	-	96	66.434	ENSLBEG00000010100	-	92	66.434	Labrus_bergylta
ENSCVAG00000003747	-	85	65.354	ENSLBEG00000007243	-	94	65.354	Labrus_bergylta
ENSCVAG00000003747	-	95	65.493	ENSLBEG00000010115	-	86	65.493	Labrus_bergylta
ENSCVAG00000003747	-	83	59.167	ENSLBEG00000007190	-	81	59.167	Labrus_bergylta
ENSCVAG00000003747	-	95	65.493	ENSLBEG00000010046	-	90	65.493	Labrus_bergylta
ENSCVAG00000003747	-	86	63.566	ENSLBEG00000007220	-	73	63.566	Labrus_bergylta
ENSCVAG00000003747	-	95	71.831	ENSMAMG00000019358	-	86	71.831	Mastacembelus_armatus
ENSCVAG00000003747	-	95	71.014	ENSMZEG00005002337	-	88	71.014	Maylandia_zebra
ENSCVAG00000003747	-	95	70.290	ENSMZEG00005002350	-	85	70.290	Maylandia_zebra
ENSCVAG00000003747	-	95	71.014	ENSMMOG00000020154	-	87	71.014	Mola_mola
ENSCVAG00000003747	-	95	71.739	ENSMMOG00000020156	-	90	71.739	Mola_mola
ENSCVAG00000003747	-	93	71.111	ENSMMOG00000020157	-	91	71.111	Mola_mola
ENSCVAG00000003747	-	80	67.500	ENSMALG00000021097	-	96	67.500	Monopterus_albus
ENSCVAG00000003747	-	86	57.143	ENSMALG00000014591	-	80	57.143	Monopterus_albus
ENSCVAG00000003747	-	95	65.942	ENSNBRG00000009099	-	83	65.942	Neolamprologus_brichardi
ENSCVAG00000003747	-	95	71.739	ENSNBRG00000009079	-	85	71.739	Neolamprologus_brichardi
ENSCVAG00000003747	-	95	74.638	ENSONIG00000021378	-	91	74.638	Oreochromis_niloticus
ENSCVAG00000003747	-	95	67.391	ENSONIG00000009459	-	85	67.391	Oreochromis_niloticus
ENSCVAG00000003747	-	97	65.714	ENSORLG00000001055	-	87	65.714	Oryzias_latipes
ENSCVAG00000003747	-	95	64.493	ENSOMEG00000015284	-	86	64.493	Oryzias_melastigma
ENSCVAG00000003747	-	95	63.309	ENSOMEG00000015296	-	61	63.309	Oryzias_melastigma
ENSCVAG00000003747	-	95	65.942	ENSPMGG00000017878	-	88	65.942	Periophthalmus_magnuspinnatus
ENSCVAG00000003747	-	99	66.434	ENSPMGG00000017877	-	87	66.434	Periophthalmus_magnuspinnatus
ENSCVAG00000003747	-	94	76.471	ENSPFOG00000020434	-	94	76.471	Poecilia_formosa
ENSCVAG00000003747	-	94	76.471	ENSPLAG00000014302	-	86	76.471	Poecilia_latipinna
ENSCVAG00000003747	-	95	75.362	ENSPLAG00000020837	-	86	75.362	Poecilia_latipinna
ENSCVAG00000003747	-	99	74.126	ENSPMEG00000011183	-	73	74.126	Poecilia_mexicana
ENSCVAG00000003747	-	95	75.362	ENSPREG00000013691	-	90	75.362	Poecilia_reticulata
ENSCVAG00000003747	-	91	70.896	ENSSMAG00000014710	-	85	70.714	Scophthalmus_maximus
ENSCVAG00000003747	-	95	70.504	ENSSMAG00000014601	-	85	70.504	Scophthalmus_maximus
ENSCVAG00000003747	-	86	66.400	ENSSMAG00000014637	-	84	68.595	Scophthalmus_maximus
ENSCVAG00000003747	-	95	69.444	ENSSDUG00000006287	-	85	69.444	Seriola_dumerili
ENSCVAG00000003747	-	95	72.464	ENSSDUG00000012574	-	85	72.464	Seriola_dumerili
ENSCVAG00000003747	-	96	69.784	ENSSLDG00000013905	-	85	69.784	Seriola_lalandi_dorsalis
ENSCVAG00000003747	-	96	68.276	ENSSLDG00000012388	-	85	68.276	Seriola_lalandi_dorsalis
ENSCVAG00000003747	-	95	66.667	ENSSPAG00000005387	-	78	66.667	Stegastes_partitus
ENSCVAG00000003747	-	99	66.667	ENSSPAG00000005395	-	95	66.667	Stegastes_partitus
ENSCVAG00000003747	-	93	66.667	ENSTRUG00000024239	-	94	66.667	Takifugu_rubripes
ENSCVAG00000003747	-	95	66.667	ENSTRUG00000020594	-	86	66.667	Takifugu_rubripes
ENSCVAG00000003747	-	79	70.435	ENSTRUG00000025007	-	74	70.435	Takifugu_rubripes
ENSCVAG00000003747	-	95	67.391	ENSTRUG00000023048	-	95	67.391	Takifugu_rubripes
ENSCVAG00000003747	-	95	75.714	ENSXCOG00000000142	-	87	75.714	Xiphophorus_couchianus
ENSCVAG00000003747	-	86	78.400	ENSXCOG00000018144	-	86	78.400	Xiphophorus_couchianus
ENSCVAG00000003747	-	94	69.853	ENSXMAG00000023121	-	91	69.853	Xiphophorus_maculatus
ENSCVAG00000003747	-	95	76.812	ENSXMAG00000019489	-	88	76.812	Xiphophorus_maculatus