EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003873 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable peptidyl-tRNA hydrolase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5713 bases
Position: chrKL654446.1:956-6668
Accession: 107104909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002701	Pept_tRNA_hydro	PF01195.19	4.6e-23	1	1
ENSCVAP00000021646	Pept_tRNA_hydro	PF01195.19	7.6e-18	1	1
ENSCVAP00000002733	Pept_tRNA_hydro	PF01195.19	5.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011279	-	414	-	ENSCVAP00000002701	137 (aa)	-	-
ENSCVAT00000011231	-	480	XM_015405024	ENSCVAP00000002733	159 (aa)	XP_015260510	-
ENSCVAT00000011263	-	498	XM_015405025	ENSCVAP00000021646	165 (aa)	XP_015260511	-

Gene Model

Click here to download ENSCVAG00000003873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003873	-	91	53.191	ENSG00000187024	PTRH1	74	57.843	Homo_sapiens
ENSCVAG00000003873	-	80	55.963	ENSAMEG00000016791	PTRH1	60	45.802	Ailuropoda_melanoleuca
ENSCVAG00000003873	-	80	63.303	ENSANAG00000025547	PTRH1	59	63.551	Aotus_nancymaae
ENSCVAG00000003873	-	91	53.191	ENSCJAG00000019841	PTRH1	59	61.682	Callithrix_jacchus
ENSCVAG00000003873	-	78	57.944	ENSCAFG00000020123	PTRH1	50	57.944	Canis_familiaris
ENSCVAG00000003873	-	80	57.798	ENSCAFG00020015776	PTRH1	55	48.387	Canis_lupus_dingo
ENSCVAG00000003873	-	80	59.633	ENSCHIG00000008188	PTRH1	51	59.633	Capra_hircus
ENSCVAG00000003873	-	53	47.126	ENSCAPG00000015926	PTRH1	62	47.126	Cavia_aperea
ENSCVAG00000003873	-	80	57.798	ENSCPOG00000023968	PTRH1	51	57.798	Cavia_porcellus
ENSCVAG00000003873	-	91	53.191	ENSCCAG00000023134	PTRH1	59	61.682	Cebus_capucinus
ENSCVAG00000003873	-	91	52.482	ENSCATG00000042852	PTRH1	59	60.748	Cercocebus_atys
ENSCVAG00000003873	-	80	59.633	ENSCLAG00000011155	PTRH1	51	59.633	Chinchilla_lanigera
ENSCVAG00000003873	-	91	52.482	ENSCSAG00000013748	PTRH1	62	52.482	Chlorocebus_sabaeus
ENSCVAG00000003873	-	67	54.348	ENSCPBG00000025207	PTRH1	53	54.348	Chrysemys_picta_bellii
ENSCVAG00000003873	-	91	52.482	ENSCANG00000039856	PTRH1	59	60.748	Colobus_angolensis_palliatus
ENSCVAG00000003873	-	80	57.798	ENSCGRG00001013108	Ptrh1	70	46.154	Cricetulus_griseus_chok1gshd
ENSCVAG00000003873	-	80	57.798	ENSCGRG00000016553	Ptrh1	78	46.154	Cricetulus_griseus_crigri
ENSCVAG00000003873	-	80	69.725	ENSDARG00000098206	ptrh1	62	68.421	Danio_rerio
ENSCVAG00000003873	-	80	60.000	ENSDNOG00000024194	PTRH1	51	60.000	Dasypus_novemcinctus
ENSCVAG00000003873	-	91	52.113	ENSDORG00000013321	Ptrh1	66	52.113	Dipodomys_ordii
ENSCVAG00000003873	-	80	60.550	ENSEASG00005020466	PTRH1	51	60.550	Equus_asinus_asinus
ENSCVAG00000003873	-	91	51.064	ENSFCAG00000001483	PTRH1	66	51.064	Felis_catus
ENSCVAG00000003873	-	82	54.464	ENSFALG00000001352	PTRH1	53	54.464	Ficedula_albicollis
ENSCVAG00000003873	-	80	61.468	ENSFDAG00000020077	PTRH1	70	48.951	Fukomys_damarensis
ENSCVAG00000003873	-	77	71.698	ENSGMOG00000009801	PTRH1	76	71.698	Gadus_morhua
ENSCVAG00000003873	-	80	83.486	ENSGACG00000014682	ptrh1	57	82.727	Gasterosteus_aculeatus
ENSCVAG00000003873	-	81	55.856	ENSGAGG00000022860	PTRH1	50	55.856	Gopherus_agassizii
ENSCVAG00000003873	-	91	52.482	ENSGGOG00000011033	PTRH1	59	59.813	Gorilla_gorilla
ENSCVAG00000003873	-	80	60.550	ENSHGLG00000019147	PTRH1	63	50.769	Heterocephalus_glaber_female
ENSCVAG00000003873	-	80	58.716	ENSHGLG00100003681	PTRH1	55	58.716	Heterocephalus_glaber_male
ENSCVAG00000003873	-	80	58.716	ENSSTOG00000008942	PTRH1	62	50.000	Ictidomys_tridecemlineatus
ENSCVAG00000003873	-	80	59.633	ENSJJAG00000014338	Ptrh1	63	50.382	Jaculus_jaculus
ENSCVAG00000003873	-	80	85.455	ENSLBEG00000028842	ptrh1	65	85.455	Labrus_bergylta
ENSCVAG00000003873	-	91	51.429	ENSLAFG00000021934	PTRH1	69	51.429	Loxodonta_africana
ENSCVAG00000003873	-	91	52.482	ENSMFAG00000001700	PTRH1	59	60.748	Macaca_fascicularis
ENSCVAG00000003873	-	91	52.482	ENSMMUG00000016424	PTRH1	59	60.748	Macaca_mulatta
ENSCVAG00000003873	-	91	52.482	ENSMNEG00000033061	PTRH1	59	60.748	Macaca_nemestrina
ENSCVAG00000003873	-	80	58.716	ENSMAUG00000006266	Ptrh1	64	49.242	Mesocricetus_auratus
ENSCVAG00000003873	-	80	60.550	ENSMICG00000005611	PTRH1	58	60.748	Microcebus_murinus
ENSCVAG00000003873	-	80	59.633	ENSMOCG00000013992	Ptrh1	64	50.382	Microtus_ochrogaster
ENSCVAG00000003873	-	80	52.294	ENSMODG00000005503	PTRH1	59	46.154	Monodelphis_domestica
ENSCVAG00000003873	-	80	59.633	MGP_CAROLIEiJ_G0023450	Ptrh1	64	50.000	Mus_caroli
ENSCVAG00000003873	-	80	59.633	ENSMUSG00000053746	Ptrh1	64	50.000	Mus_musculus
ENSCVAG00000003873	-	80	59.633	MGP_PahariEiJ_G0024907	Ptrh1	64	50.000	Mus_pahari
ENSCVAG00000003873	-	80	60.550	MGP_SPRETEiJ_G0024367	Ptrh1	64	50.758	Mus_spretus
ENSCVAG00000003873	-	78	55.556	ENSMPUG00000013790	PTRH1	50	55.556	Mustela_putorius_furo
ENSCVAG00000003873	-	80	52.066	ENSMLUG00000013454	PTRH1	64	44.366	Myotis_lucifugus
ENSCVAG00000003873	-	80	61.468	ENSNGAG00000014008	Ptrh1	64	51.908	Nannospalax_galili
ENSCVAG00000003873	-	91	51.773	ENSNLEG00000017468	PTRH1	59	59.813	Nomascus_leucogenys
ENSCVAG00000003873	-	80	58.716	ENSODEG00000004012	PTRH1	52	58.716	Octodon_degus
ENSCVAG00000003873	-	80	56.881	ENSOANG00000011891	PTRH1	58	48.092	Ornithorhynchus_anatinus
ENSCVAG00000003873	-	80	59.091	ENSOCUG00000006894	PTRH1	53	49.219	Oryctolagus_cuniculus
ENSCVAG00000003873	-	80	59.633	ENSOGAG00000008094	PTRH1	52	59.633	Otolemur_garnettii
ENSCVAG00000003873	-	91	45.395	ENSOARG00000011808	PTRH1	66	45.395	Ovis_aries
ENSCVAG00000003873	-	91	53.191	ENSPPAG00000041782	PTRH1	59	60.748	Pan_paniscus
ENSCVAG00000003873	-	91	51.064	ENSPPRG00000007889	PTRH1	66	51.064	Panthera_pardus
ENSCVAG00000003873	-	91	53.191	ENSPTRG00000021394	PTRH1	59	60.748	Pan_troglodytes
ENSCVAG00000003873	-	78	55.046	ENSPANG00000031755	PTRH1	60	43.182	Papio_anubis
ENSCVAG00000003873	-	81	65.179	ENSPMGG00000002148	ptrh1	53	65.179	Periophthalmus_magnuspinnatus
ENSCVAG00000003873	-	80	59.633	ENSPEMG00000014360	Ptrh1	64	50.758	Peromyscus_maniculatus_bairdii
ENSCVAG00000003873	-	91	51.908	ENSPPYG00000019628	PTRH1	60	51.908	Pongo_abelii
ENSCVAG00000003873	-	80	60.550	ENSPCAG00000007016	PTRH1	51	60.550	Procavia_capensis
ENSCVAG00000003873	-	80	60.550	ENSPCOG00000014541	PTRH1	58	60.748	Propithecus_coquereli
ENSCVAG00000003873	-	80	60.550	ENSPVAG00000000954	PTRH1	51	60.550	Pteropus_vampyrus
ENSCVAG00000003873	-	80	61.468	ENSRNOG00000049034	Ptrh1	64	50.758	Rattus_norvegicus
ENSCVAG00000003873	-	80	60.550	ENSRBIG00000027290	PTRH1	59	60.748	Rhinopithecus_bieti
ENSCVAG00000003873	-	91	52.482	ENSRROG00000028799	PTRH1	59	60.748	Rhinopithecus_roxellana
ENSCVAG00000003873	-	74	30.769	YHR189W	PTH1	54	30.769	Saccharomyces_cerevisiae
ENSCVAG00000003873	-	91	52.482	ENSSBOG00000026699	PTRH1	59	60.748	Saimiri_boliviensis_boliviensis
ENSCVAG00000003873	-	82	53.571	ENSSHAG00000018238	PTRH1	65	44.776	Sarcophilus_harrisii
ENSCVAG00000003873	-	80	69.725	ENSSFOG00015007053	ptrh1	54	69.725	Scleropages_formosus
ENSCVAG00000003873	-	80	89.908	ENSSDUG00000013471	ptrh1	54	89.109	Seriola_dumerili
ENSCVAG00000003873	-	80	84.404	ENSSPAG00000003298	ptrh1	55	84.404	Stegastes_partitus
ENSCVAG00000003873	-	80	61.468	ENSSSCG00000005615	PTRH1	51	61.468	Sus_scrofa
ENSCVAG00000003873	-	80	55.046	ENSTGUG00000003648	PTRH1	81	55.046	Taeniopygia_guttata
ENSCVAG00000003873	-	91	47.518	ENSTTRG00000016458	PTRH1	66	47.518	Tursiops_truncatus
ENSCVAG00000003873	-	54	56.757	ENSUAMG00000003090	-	63	56.757	Ursus_americanus
ENSCVAG00000003873	-	80	58.716	ENSUAMG00000023948	-	59	48.092	Ursus_americanus
ENSCVAG00000003873	-	80	57.798	ENSVVUG00000013198	PTRH1	55	48.387	Vulpes_vulpes
ENSCVAG00000003873	-	80	55.046	ENSXETG00000009980	ptrh1	58	55.046	Xenopus_tropicalis