EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003912 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2756 bases
Position: chrKL653460.1:224342-227097
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002768	RRM_1	PF00076.22	5e-15	1	1
ENSCVAP00000002768	U1snRNP70_N	PF12220.8	3.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011167	-	483	-	ENSCVAP00000002768	160 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003912	snrnp70	99	89.937	ENSG00000104852	SNRNP70	96	89.937	Homo_sapiens
ENSCVAG00000003912	snrnp70	89	91.549	ENSAPOG00000009322	snrnp70	89	91.549	Acanthochromis_polyacanthus
ENSCVAG00000003912	snrnp70	99	89.937	ENSANAG00000036787	SNRNP70	96	89.937	Aotus_nancymaae
ENSCVAG00000003912	snrnp70	99	89.937	ENSBTAG00000048800	-	96	89.937	Bos_taurus
ENSCVAG00000003912	snrnp70	99	89.937	ENSCJAG00000000193	SNRNP70	96	89.937	Callithrix_jacchus
ENSCVAG00000003912	snrnp70	99	89.937	ENSCAFG00000003711	SNRNP70	96	89.937	Canis_familiaris
ENSCVAG00000003912	snrnp70	99	85.714	ENSCAFG00020025470	SNRNP70	96	85.714	Canis_lupus_dingo
ENSCVAG00000003912	snrnp70	99	89.937	ENSCHIG00000018534	-	96	89.937	Capra_hircus
ENSCVAG00000003912	snrnp70	66	80.952	ENSTSYG00000032350	-	83	82.524	Carlito_syrichta
ENSCVAG00000003912	snrnp70	99	89.937	ENSCANG00000036607	SNRNP70	64	89.937	Colobus_angolensis_palliatus
ENSCVAG00000003912	snrnp70	99	96.226	ENSCSEG00000011978	snrnp70	70	96.226	Cynoglossus_semilaevis
ENSCVAG00000003912	snrnp70	99	94.969	ENSDARG00000077126	snrnp70	98	94.969	Danio_rerio
ENSCVAG00000003912	snrnp70	99	89.937	ENSDNOG00000035849	-	96	89.937	Dasypus_novemcinctus
ENSCVAG00000003912	snrnp70	99	89.937	ENSECAG00000013936	-	96	89.937	Equus_caballus
ENSCVAG00000003912	snrnp70	99	94.969	ENSGMOG00000011492	snrnp70	70	94.969	Gadus_morhua
ENSCVAG00000003912	snrnp70	99	94.969	ENSGACG00000000448	snrnp70	50	94.969	Gasterosteus_aculeatus
ENSCVAG00000003912	snrnp70	100	73.469	ENSGAGG00000012628	SNRNP70	100	70.918	Gopherus_agassizii
ENSCVAG00000003912	snrnp70	99	89.937	ENSGGOG00000008245	SNRNP70	96	89.937	Gorilla_gorilla
ENSCVAG00000003912	snrnp70	99	89.937	ENSHGLG00100001651	-	96	89.937	Heterocephalus_glaber_male
ENSCVAG00000003912	snrnp70	99	89.937	ENSSTOG00000013988	-	96	89.937	Ictidomys_tridecemlineatus
ENSCVAG00000003912	snrnp70	99	89.937	ENSLAFG00000028536	SNRNP70	69	89.937	Loxodonta_africana
ENSCVAG00000003912	snrnp70	99	89.937	ENSMMUG00000004928	SNRNP70	96	89.937	Macaca_mulatta
ENSCVAG00000003912	snrnp70	99	89.937	ENSMICG00000038437	SNRNP70	96	89.937	Microcebus_murinus
ENSCVAG00000003912	snrnp70	100	90.625	MGP_CAROLIEiJ_G0029714	Snrnp70	100	90.826	Mus_caroli
ENSCVAG00000003912	snrnp70	100	90.625	ENSMUSG00000063511	Snrnp70	100	90.826	Mus_musculus
ENSCVAG00000003912	snrnp70	100	90.625	MGP_PahariEiJ_G0012939	Snrnp70	100	90.826	Mus_pahari
ENSCVAG00000003912	snrnp70	100	90.625	MGP_SPRETEiJ_G0030812	Snrnp70	100	90.826	Mus_spretus
ENSCVAG00000003912	snrnp70	99	95.597	ENSNBRG00000003126	snrnp70	68	95.597	Neolamprologus_brichardi
ENSCVAG00000003912	snrnp70	96	89.542	ENSNLEG00000004899	SNRNP70	61	89.542	Nomascus_leucogenys
ENSCVAG00000003912	snrnp70	99	90.566	ENSOANG00000005213	SNRNP70	69	90.566	Ornithorhynchus_anatinus
ENSCVAG00000003912	snrnp70	99	89.937	ENSPPAG00000035067	SNRNP70	96	89.937	Pan_paniscus
ENSCVAG00000003912	snrnp70	99	89.937	ENSPTRG00000011277	SNRNP70	96	89.937	Pan_troglodytes
ENSCVAG00000003912	snrnp70	100	85.000	ENSPKIG00000019992	snrnp70	84	85.000	Paramormyrops_kingsleyae
ENSCVAG00000003912	snrnp70	99	90.566	ENSPSIG00000015251	SNRNP70	63	90.566	Pelodiscus_sinensis
ENSCVAG00000003912	snrnp70	100	98.125	ENSPMGG00000010153	snrnp70	77	98.125	Periophthalmus_magnuspinnatus
ENSCVAG00000003912	snrnp70	99	79.245	ENSPMAG00000008502	snrnp70	82	79.245	Petromyzon_marinus
ENSCVAG00000003912	snrnp70	99	79.245	ENSPCOG00000023103	SNRNP70	56	79.245	Propithecus_coquereli
ENSCVAG00000003912	snrnp70	99	89.937	ENSRBIG00000042387	SNRNP70	59	89.937	Rhinopithecus_bieti
ENSCVAG00000003912	snrnp70	99	89.937	ENSRROG00000033636	SNRNP70	59	89.937	Rhinopithecus_roxellana
ENSCVAG00000003912	snrnp70	99	89.937	ENSSBOG00000020026	SNRNP70	96	89.937	Saimiri_boliviensis_boliviensis
ENSCVAG00000003912	snrnp70	99	89.937	ENSSSCG00000023792	-	96	89.937	Sus_scrofa
ENSCVAG00000003912	snrnp70	69	96.364	ENSTNIG00000014186	-	99	96.364	Tetraodon_nigroviridis
ENSCVAG00000003912	snrnp70	99	89.937	ENSUMAG00000001467	SNRNP70	96	89.937	Ursus_maritimus
ENSCVAG00000003912	snrnp70	82	88.550	ENSVPAG00000005959	-	59	88.550	Vicugna_pacos
ENSCVAG00000003912	snrnp70	99	89.937	ENSVVUG00000022976	SNRNP70	96	89.937	Vulpes_vulpes