EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004005 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2499 bases
Position: chrKL652629.1:194089-196587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002848	RRM_1	PF00076.22	1.2e-31	1	3
ENSCVAP00000002848	RRM_1	PF00076.22	1.2e-31	2	3
ENSCVAP00000002848	RRM_1	PF00076.22	1.2e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011032	-	2499	-	ENSCVAP00000002848	832 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000004005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004005	-	100	58.721	ENSCVAG00000013185	rbm15	100	58.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004005	-	100	52.072	ENSG00000162775	RBM15	98	53.961	Homo_sapiens
ENSCVAG00000004005	-	96	71.620	ENSAPOG00000017590	-	100	72.141	Acanthochromis_polyacanthus
ENSCVAG00000004005	-	100	59.285	ENSAPOG00000018748	rbm15	100	59.884	Acanthochromis_polyacanthus
ENSCVAG00000004005	-	99	51.651	ENSAMEG00000011540	RBM15	95	53.747	Ailuropoda_melanoleuca
ENSCVAG00000004005	-	100	59.497	ENSACIG00000004343	rbm15	100	59.611	Amphilophus_citrinellus
ENSCVAG00000004005	-	100	71.645	ENSACIG00000019811	-	100	71.879	Amphilophus_citrinellus
ENSCVAG00000004005	-	100	71.981	ENSAOCG00000021969	-	100	72.450	Amphiprion_ocellaris
ENSCVAG00000004005	-	100	59.285	ENSAOCG00000016849	rbm15	100	59.884	Amphiprion_ocellaris
ENSCVAG00000004005	-	100	59.400	ENSAPEG00000020077	rbm15	100	60.000	Amphiprion_percula
ENSCVAG00000004005	-	100	71.161	ENSAPEG00000015151	-	98	72.268	Amphiprion_percula
ENSCVAG00000004005	-	100	59.653	ENSATEG00000019337	rbm15	100	60.208	Anabas_testudineus
ENSCVAG00000004005	-	100	71.478	ENSATEG00000005926	-	100	71.828	Anabas_testudineus
ENSCVAG00000004005	-	99	51.757	ENSANAG00000020673	RBM15	94	53.854	Aotus_nancymaae
ENSCVAG00000004005	-	100	59.657	ENSACLG00000001673	rbm15	100	59.543	Astatotilapia_calliptera
ENSCVAG00000004005	-	99	70.258	ENSACLG00000022961	-	97	70.258	Astatotilapia_calliptera
ENSCVAG00000004005	-	100	61.117	ENSAMXG00000026103	rbm15	100	61.802	Astyanax_mexicanus
ENSCVAG00000004005	-	99	52.542	ENSBTAG00000012555	RBM15	95	54.371	Bos_taurus
ENSCVAG00000004005	-	99	51.702	ENSCJAG00000003411	RBM15	94	53.854	Callithrix_jacchus
ENSCVAG00000004005	-	99	51.812	ENSCAFG00000019789	RBM15	94	53.863	Canis_familiaris
ENSCVAG00000004005	-	99	51.757	ENSCAFG00020009671	RBM15	94	53.863	Canis_lupus_dingo
ENSCVAG00000004005	-	99	52.280	ENSCHIG00000026774	RBM15	95	54.051	Capra_hircus
ENSCVAG00000004005	-	99	52.090	ENSTSYG00000000106	RBM15	94	54.144	Carlito_syrichta
ENSCVAG00000004005	-	71	54.809	ENSCAPG00000013057	RBM15	97	55.420	Cavia_aperea
ENSCVAG00000004005	-	99	51.860	ENSCPOG00000007520	RBM15	95	54.011	Cavia_porcellus
ENSCVAG00000004005	-	99	51.651	ENSCCAG00000036780	RBM15	94	53.747	Cebus_capucinus
ENSCVAG00000004005	-	99	51.706	ENSCATG00000015743	RBM15	94	53.698	Cercocebus_atys
ENSCVAG00000004005	-	99	51.706	ENSCLAG00000008406	RBM15	95	53.755	Chinchilla_lanigera
ENSCVAG00000004005	-	99	51.706	ENSCSAG00000001563	RBM15	93	53.698	Chlorocebus_sabaeus
ENSCVAG00000004005	-	87	53.118	ENSCPBG00000001662	RBM15	100	51.031	Chrysemys_picta_bellii
ENSCVAG00000004005	-	99	51.551	ENSCANG00000038717	RBM15	93	53.591	Colobus_angolensis_palliatus
ENSCVAG00000004005	-	99	51.599	ENSCGRG00001001004	Rbm15	95	53.118	Cricetulus_griseus_chok1gshd
ENSCVAG00000004005	-	99	51.599	ENSCGRG00000010592	Rbm15	95	53.118	Cricetulus_griseus_crigri
ENSCVAG00000004005	-	100	60.000	ENSCSEG00000004062	rbm15	100	59.653	Cynoglossus_semilaevis
ENSCVAG00000004005	-	100	63.552	ENSCSEG00000002314	-	100	63.091	Cynoglossus_semilaevis
ENSCVAG00000004005	-	100	61.406	ENSDARG00000073847	rbm15	100	61.938	Danio_rerio
ENSCVAG00000004005	-	70	51.190	ENSDNOG00000032007	RBM15	90	54.642	Dasypus_novemcinctus
ENSCVAG00000004005	-	100	51.489	ENSDORG00000005669	Rbm15	100	53.961	Dipodomys_ordii
ENSCVAG00000004005	-	99	51.596	ENSEASG00005005359	RBM15	95	53.640	Equus_asinus_asinus
ENSCVAG00000004005	-	99	51.596	ENSECAG00000023660	RBM15	95	53.640	Equus_caballus
ENSCVAG00000004005	-	99	56.836	ENSELUG00000016087	rbm15	97	57.788	Esox_lucius
ENSCVAG00000004005	-	100	62.005	ENSELUG00000014614	RBM15	100	61.744	Esox_lucius
ENSCVAG00000004005	-	99	51.596	ENSFCAG00000028208	RBM15	94	54.095	Felis_catus
ENSCVAG00000004005	-	66	54.454	ENSFALG00000003062	RBM15	98	55.853	Ficedula_albicollis
ENSCVAG00000004005	-	99	52.285	ENSFDAG00000020743	RBM15	95	54.118	Fukomys_damarensis
ENSCVAG00000004005	-	100	58.605	ENSFHEG00000005024	rbm15	100	59.186	Fundulus_heteroclitus
ENSCVAG00000004005	-	100	77.712	ENSFHEG00000005559	-	100	77.712	Fundulus_heteroclitus
ENSCVAG00000004005	-	62	62.804	ENSGMOG00000019941	rbm15	100	62.921	Gadus_morhua
ENSCVAG00000004005	-	87	52.828	ENSGALG00000000401	RBM15	100	50.774	Gallus_gallus
ENSCVAG00000004005	-	100	57.760	ENSGAFG00000001534	rbm15	98	57.993	Gambusia_affinis
ENSCVAG00000004005	-	100	80.664	ENSGAFG00000021611	-	96	80.664	Gambusia_affinis
ENSCVAG00000004005	-	100	59.584	ENSGACG00000007932	rbm15	99	59.838	Gasterosteus_aculeatus
ENSCVAG00000004005	-	99	69.421	ENSGACG00000001022	-	99	69.185	Gasterosteus_aculeatus
ENSCVAG00000004005	-	87	52.821	ENSGAGG00000012252	RBM15	100	50.926	Gopherus_agassizii
ENSCVAG00000004005	-	99	51.970	ENSGGOG00000003655	RBM15	93	53.961	Gorilla_gorilla
ENSCVAG00000004005	-	100	59.386	ENSHBUG00000022227	rbm15	100	59.272	Haplochromis_burtoni
ENSCVAG00000004005	-	100	69.977	ENSHBUG00000003220	-	100	69.977	Haplochromis_burtoni
ENSCVAG00000004005	-	99	52.285	ENSHGLG00000014811	RBM15	95	54.225	Heterocephalus_glaber_female
ENSCVAG00000004005	-	99	52.285	ENSHGLG00100017137	RBM15	95	54.225	Heterocephalus_glaber_male
ENSCVAG00000004005	-	100	57.796	ENSHCOG00000005229	RBM15	100	57.444	Hippocampus_comes
ENSCVAG00000004005	-	100	58.653	ENSHCOG00000004048	rbm15	100	58.653	Hippocampus_comes
ENSCVAG00000004005	-	100	60.321	ENSIPUG00000004415	RBM15	100	60.710	Ictalurus_punctatus
ENSCVAG00000004005	-	99	51.809	ENSSTOG00000026597	RBM15	95	53.747	Ictidomys_tridecemlineatus
ENSCVAG00000004005	-	99	52.081	ENSJJAG00000021795	Rbm15	95	53.598	Jaculus_jaculus
ENSCVAG00000004005	-	100	59.907	ENSKMAG00000017681	rbm15	100	60.393	Kryptolebias_marmoratus
ENSCVAG00000004005	-	100	66.627	ENSKMAG00000021291	-	99	67.182	Kryptolebias_marmoratus
ENSCVAG00000004005	-	100	59.700	ENSLBEG00000008274	rbm15	100	59.884	Labrus_bergylta
ENSCVAG00000004005	-	96	69.100	ENSLBEG00000013105	-	100	68.856	Labrus_bergylta
ENSCVAG00000004005	-	100	57.029	ENSLACG00000018372	RBM15	100	57.943	Latimeria_chalumnae
ENSCVAG00000004005	-	100	60.045	ENSLOCG00000017940	rbm15	100	60.953	Lepisosteus_oculatus
ENSCVAG00000004005	-	99	51.816	ENSLAFG00000012897	RBM15	95	53.912	Loxodonta_africana
ENSCVAG00000004005	-	99	51.599	ENSMFAG00000029929	RBM15	94	53.591	Macaca_fascicularis
ENSCVAG00000004005	-	99	51.599	ENSMMUG00000015020	RBM15	94	53.591	Macaca_mulatta
ENSCVAG00000004005	-	99	51.599	ENSMNEG00000045235	RBM15	94	53.591	Macaca_nemestrina
ENSCVAG00000004005	-	99	51.706	ENSMLEG00000035727	RBM15	93	53.698	Mandrillus_leucophaeus
ENSCVAG00000004005	-	96	67.433	ENSMAMG00000023921	-	100	67.797	Mastacembelus_armatus
ENSCVAG00000004005	-	100	59.653	ENSMAMG00000010732	rbm15	100	59.538	Mastacembelus_armatus
ENSCVAG00000004005	-	100	59.657	ENSMZEG00005006595	rbm15	100	59.543	Maylandia_zebra
ENSCVAG00000004005	-	99	70.375	ENSMZEG00005010876	-	98	70.375	Maylandia_zebra
ENSCVAG00000004005	-	99	51.544	ENSMAUG00000007198	Rbm15	95	53.061	Mesocricetus_auratus
ENSCVAG00000004005	-	99	51.163	ENSMICG00000005255	RBM15	95	53.298	Microcebus_murinus
ENSCVAG00000004005	-	99	51.864	ENSMOCG00000013142	Rbm15	95	53.169	Microtus_ochrogaster
ENSCVAG00000004005	-	100	65.882	ENSMMOG00000021778	-	100	66.118	Mola_mola
ENSCVAG00000004005	-	100	58.362	ENSMMOG00000002357	rbm15	100	58.430	Mola_mola
ENSCVAG00000004005	-	100	66.511	ENSMALG00000017867	-	100	66.511	Monopterus_albus
ENSCVAG00000004005	-	100	59.217	ENSMALG00000019648	rbm15	100	59.609	Monopterus_albus
ENSCVAG00000004005	-	99	51.489	MGP_CAROLIEiJ_G0025501	Rbm15	95	53.017	Mus_caroli
ENSCVAG00000004005	-	99	51.489	ENSMUSG00000048109	Rbm15	95	53.017	Mus_musculus
ENSCVAG00000004005	-	99	51.489	MGP_PahariEiJ_G0026947	Rbm15	95	53.017	Mus_pahari
ENSCVAG00000004005	-	99	51.489	MGP_SPRETEiJ_G0026451	Rbm15	95	53.017	Mus_spretus
ENSCVAG00000004005	-	99	51.596	ENSMPUG00000003822	RBM15	94	53.640	Mustela_putorius_furo
ENSCVAG00000004005	-	99	52.954	ENSMLUG00000007169	RBM15	94	54.752	Myotis_lucifugus
ENSCVAG00000004005	-	99	51.113	ENSNGAG00000011394	Rbm15	95	53.142	Nannospalax_galili
ENSCVAG00000004005	-	100	59.272	ENSNBRG00000003947	rbm15	100	59.158	Neolamprologus_brichardi
ENSCVAG00000004005	-	100	59.272	ENSNBRG00000008870	rbm15	100	59.158	Neolamprologus_brichardi
ENSCVAG00000004005	-	100	70.561	ENSNBRG00000005460	-	100	70.561	Neolamprologus_brichardi
ENSCVAG00000004005	-	99	51.864	ENSNLEG00000003601	RBM15	93	53.961	Nomascus_leucogenys
ENSCVAG00000004005	-	99	52.729	ENSMEUG00000015940	RBM15	93	54.803	Notamacropus_eugenii
ENSCVAG00000004005	-	100	51.104	ENSODEG00000019343	RBM15	100	53.575	Octodon_degus
ENSCVAG00000004005	-	96	71.117	ENSONIG00000018955	-	100	71.117	Oreochromis_niloticus
ENSCVAG00000004005	-	100	60.023	ENSONIG00000002532	rbm15	100	59.908	Oreochromis_niloticus
ENSCVAG00000004005	-	99	51.438	ENSOCUG00000002434	RBM15	94	53.640	Oryctolagus_cuniculus
ENSCVAG00000004005	-	100	69.340	ENSORLG00000000433	-	99	69.458	Oryzias_latipes
ENSCVAG00000004005	-	100	59.255	ENSORLG00000006197	rbm15	100	59.535	Oryzias_latipes
ENSCVAG00000004005	-	100	68.831	ENSORLG00020008048	-	100	68.949	Oryzias_latipes_hni
ENSCVAG00000004005	-	100	59.255	ENSORLG00020011223	rbm15	100	59.535	Oryzias_latipes_hni
ENSCVAG00000004005	-	100	59.371	ENSORLG00015003078	rbm15	100	59.651	Oryzias_latipes_hsok
ENSCVAG00000004005	-	100	68.978	ENSORLG00015004063	-	100	69.213	Oryzias_latipes_hsok
ENSCVAG00000004005	-	100	66.510	ENSOMEG00000014662	-	100	67.920	Oryzias_melastigma
ENSCVAG00000004005	-	100	58.565	ENSOMEG00000020683	rbm15	100	58.844	Oryzias_melastigma
ENSCVAG00000004005	-	100	52.295	ENSOGAG00000009182	RBM15	100	53.461	Otolemur_garnettii
ENSCVAG00000004005	-	99	51.962	ENSOARG00000019430	RBM15	93	53.731	Ovis_aries
ENSCVAG00000004005	-	99	51.970	ENSPPAG00000041967	RBM15	93	53.961	Pan_paniscus
ENSCVAG00000004005	-	99	51.596	ENSPPRG00000013347	RBM15	94	54.095	Panthera_pardus
ENSCVAG00000004005	-	99	52.552	ENSPTIG00000010318	RBM15	94	54.198	Panthera_tigris_altaica
ENSCVAG00000004005	-	99	51.970	ENSPTRG00000001074	RBM15	94	53.912	Pan_troglodytes
ENSCVAG00000004005	-	99	51.706	ENSPANG00000020891	RBM15	94	53.698	Papio_anubis
ENSCVAG00000004005	-	85	59.701	ENSPKIG00000013584	rbm15	92	58.103	Paramormyrops_kingsleyae
ENSCVAG00000004005	-	100	61.744	ENSPKIG00000003067	-	100	61.628	Paramormyrops_kingsleyae
ENSCVAG00000004005	-	59	51.560	ENSPSIG00000001607	RBM15	100	51.927	Pelodiscus_sinensis
ENSCVAG00000004005	-	100	59.259	ENSPMGG00000016039	rbm15	100	59.096	Periophthalmus_magnuspinnatus
ENSCVAG00000004005	-	100	68.905	ENSPMGG00000017642	-	100	68.905	Periophthalmus_magnuspinnatus
ENSCVAG00000004005	-	99	51.864	ENSPEMG00000000014	Rbm15	95	53.383	Peromyscus_maniculatus_bairdii
ENSCVAG00000004005	-	87	56.289	ENSPCIG00000003458	RBM15	94	54.437	Phascolarctos_cinereus
ENSCVAG00000004005	-	99	57.509	ENSPFOG00000012754	rbm15	97	57.625	Poecilia_formosa
ENSCVAG00000004005	-	100	58.237	ENSPLAG00000003560	rbm15	100	58.701	Poecilia_latipinna
ENSCVAG00000004005	-	100	82.660	ENSPLAG00000015343	-	100	82.660	Poecilia_latipinna
ENSCVAG00000004005	-	100	82.779	ENSPMEG00000001923	-	100	82.779	Poecilia_mexicana
ENSCVAG00000004005	-	100	58.353	ENSPMEG00000002049	rbm15	100	58.817	Poecilia_mexicana
ENSCVAG00000004005	-	100	82.681	ENSPREG00000004167	-	100	82.681	Poecilia_reticulata
ENSCVAG00000004005	-	100	58.121	ENSPREG00000014581	rbm15	100	58.585	Poecilia_reticulata
ENSCVAG00000004005	-	66	42.367	ENSPPYG00000015734	-	99	42.196	Pongo_abelii
ENSCVAG00000004005	-	99	51.757	ENSPPYG00000001051	RBM15	94	53.912	Pongo_abelii
ENSCVAG00000004005	-	71	51.343	ENSPCAG00000006329	RBM15	66	53.233	Procavia_capensis
ENSCVAG00000004005	-	99	51.966	ENSPCOG00000019767	RBM15	94	54.060	Propithecus_coquereli
ENSCVAG00000004005	-	99	51.864	ENSPVAG00000007193	RBM15	93	53.854	Pteropus_vampyrus
ENSCVAG00000004005	-	100	59.545	ENSPNYG00000005143	rbm15	100	59.091	Pundamilia_nyererei
ENSCVAG00000004005	-	100	70.327	ENSPNYG00000007434	-	100	70.327	Pundamilia_nyererei
ENSCVAG00000004005	-	100	60.825	ENSPNAG00000007496	rbm15	100	61.927	Pygocentrus_nattereri
ENSCVAG00000004005	-	99	51.489	ENSRNOG00000047499	Rbm15	95	53.004	Rattus_norvegicus
ENSCVAG00000004005	-	99	51.599	ENSRBIG00000044261	RBM15	94	53.591	Rhinopithecus_bieti
ENSCVAG00000004005	-	99	51.599	ENSRROG00000045519	RBM15	94	53.591	Rhinopithecus_roxellana
ENSCVAG00000004005	-	99	51.651	ENSSBOG00000021394	RBM15	94	53.747	Saimiri_boliviensis_boliviensis
ENSCVAG00000004005	-	100	68.611	ENSSMAG00000000431	-	99	68.495	Scophthalmus_maximus
ENSCVAG00000004005	-	100	59.518	ENSSMAG00000019106	rbm15	100	59.701	Scophthalmus_maximus
ENSCVAG00000004005	-	100	59.191	ENSSDUG00000008769	rbm15	100	59.306	Seriola_dumerili
ENSCVAG00000004005	-	100	72.695	ENSSDUG00000009424	-	100	73.162	Seriola_dumerili
ENSCVAG00000004005	-	100	72.579	ENSSLDG00000022441	-	100	73.046	Seriola_lalandi_dorsalis
ENSCVAG00000004005	-	100	59.306	ENSSLDG00000002691	rbm15	100	59.422	Seriola_lalandi_dorsalis
ENSCVAG00000004005	-	87	50.222	ENSSARG00000000360	RBM15	83	53.244	Sorex_araneus
ENSCVAG00000004005	-	100	72.300	ENSSPAG00000007739	-	99	72.685	Stegastes_partitus
ENSCVAG00000004005	-	100	59.538	ENSSPAG00000004965	rbm15	100	59.884	Stegastes_partitus
ENSCVAG00000004005	-	100	52.068	ENSSSCG00000006809	RBM15	100	54.118	Sus_scrofa
ENSCVAG00000004005	-	66	54.237	ENSTGUG00000000886	RBM15	99	55.272	Taeniopygia_guttata
ENSCVAG00000004005	-	100	58.237	ENSTRUG00000002921	rbm15	100	58.585	Takifugu_rubripes
ENSCVAG00000004005	-	99	65.207	ENSTRUG00000007851	-	97	65.325	Takifugu_rubripes
ENSCVAG00000004005	-	100	58.237	ENSTNIG00000015129	rbm15	99	58.237	Tetraodon_nigroviridis
ENSCVAG00000004005	-	99	51.983	ENSTBEG00000008339	RBM15	93	53.987	Tupaia_belangeri
ENSCVAG00000004005	-	99	51.864	ENSTTRG00000001317	RBM15	93	53.747	Tursiops_truncatus
ENSCVAG00000004005	-	100	51.911	ENSUAMG00000017330	RBM15	95	53.895	Ursus_americanus
ENSCVAG00000004005	-	99	51.702	ENSUMAG00000013623	RBM15	94	53.747	Ursus_maritimus
ENSCVAG00000004005	-	99	51.651	ENSVVUG00000002929	RBM15	94	53.863	Vulpes_vulpes
ENSCVAG00000004005	-	100	53.650	ENSXETG00000002029	rbm15	100	53.165	Xenopus_tropicalis
ENSCVAG00000004005	-	100	82.325	ENSXCOG00000003003	-	100	82.325	Xiphophorus_couchianus
ENSCVAG00000004005	-	100	58.585	ENSXCOG00000006328	rbm15	100	58.817	Xiphophorus_couchianus
ENSCVAG00000004005	-	100	82.088	ENSXMAG00000009062	-	100	82.088	Xiphophorus_maculatus
ENSCVAG00000004005	-	100	58.585	ENSXMAG00000020192	rbm15	100	58.817	Xiphophorus_maculatus