EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004044 (Gene tree)
Gene ID: 107082746
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2426 bases
Position: chrKL652561.1:169048-171473
Accession: 107082746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021765	DEAD	PF00270.29	9.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010973	-	2426	XM_015371578	ENSCVAP00000021765	554 (aa)	XP_015227064	UPI0007425FB8

Gene Model

Click here to download ENSCVAG00000004044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004044	ddx28	58	33.562	ENSCVAG00000017562	ddx51	70	33.108
ENSCVAG00000004044	ddx28	69	31.105	ENSCVAG00000003186	eif4a2	87	31.362
ENSCVAG00000004044	ddx28	70	30.357	ENSCVAG00000006864	eif4a3	89	30.102
ENSCVAG00000004044	ddx28	62	37.143	ENSCVAG00000020927	ddx1	60	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004044	ddx28	90	49.414	ENSG00000182810	DDX28	94	49.414	Homo_sapiens
ENSCVAG00000004044	ddx28	100	76.512	ENSAPOG00000000991	ddx28	98	76.512	Acanthochromis_polyacanthus
ENSCVAG00000004044	ddx28	91	50.291	ENSAMEG00000019426	DDX28	94	50.291	Ailuropoda_melanoleuca
ENSCVAG00000004044	ddx28	100	74.423	ENSACIG00000021615	ddx28	99	74.423	Amphilophus_citrinellus
ENSCVAG00000004044	ddx28	100	76.690	ENSAOCG00000004610	ddx28	98	76.690	Amphiprion_ocellaris
ENSCVAG00000004044	ddx28	100	76.335	ENSAPEG00000002143	ddx28	98	76.335	Amphiprion_percula
ENSCVAG00000004044	ddx28	100	74.956	ENSATEG00000018691	ddx28	99	74.956	Anabas_testudineus
ENSCVAG00000004044	ddx28	91	46.693	ENSACAG00000009755	DDX28	94	46.693	Anolis_carolinensis
ENSCVAG00000004044	ddx28	99	71.658	ENSACLG00000012984	ddx28	99	71.658	Astatotilapia_calliptera
ENSCVAG00000004044	ddx28	94	62.292	ENSAMXG00000005878	ddx28	94	62.292	Astyanax_mexicanus
ENSCVAG00000004044	ddx28	91	50.290	ENSBTAG00000004290	DDX28	93	50.290	Bos_taurus
ENSCVAG00000004044	ddx28	90	49.902	ENSCAFG00000020327	DDX28	95	49.902	Canis_familiaris
ENSCVAG00000004044	ddx28	90	49.902	ENSCAFG00020019785	DDX28	95	49.902	Canis_lupus_dingo
ENSCVAG00000004044	ddx28	91	50.870	ENSCHIG00000009658	DDX28	96	49.907	Capra_hircus
ENSCVAG00000004044	ddx28	91	50.682	ENSCPOG00000013746	DDX28	94	50.682	Cavia_porcellus
ENSCVAG00000004044	ddx28	90	50.195	ENSCSAG00000018472	DDX28	92	50.195	Chlorocebus_sabaeus
ENSCVAG00000004044	ddx28	82	50.980	ENSCPBG00000012105	DDX28	81	52.605	Chrysemys_picta_bellii
ENSCVAG00000004044	ddx28	64	36.164	ENSCSAVG00000006341	-	94	35.890	Ciona_savignyi
ENSCVAG00000004044	ddx28	88	49.900	ENSCGRG00001024412	Ddx28	94	50.000	Cricetulus_griseus_chok1gshd
ENSCVAG00000004044	ddx28	99	67.679	ENSCSEG00000011651	ddx28	99	67.679	Cynoglossus_semilaevis
ENSCVAG00000004044	ddx28	99	60.971	ENSDARG00000060411	ddx28	98	60.971	Danio_rerio
ENSCVAG00000004044	ddx28	64	56.986	ENSDNOG00000033593	DDX28	98	56.986	Dasypus_novemcinctus
ENSCVAG00000004044	ddx28	95	47.300	ENSDORG00000028868	Ddx28	96	47.770	Dipodomys_ordii
ENSCVAG00000004044	ddx28	80	36.726	FBgn0086130	Dbp21E2	87	35.391	Drosophila_melanogaster
ENSCVAG00000004044	ddx28	92	49.423	ENSETEG00000001062	-	95	49.423	Echinops_telfairi
ENSCVAG00000004044	ddx28	73	43.386	ENSEBUG00000004791	ddx28	76	42.308	Eptatretus_burgeri
ENSCVAG00000004044	ddx28	91	50.000	ENSEASG00005020387	DDX28	97	48.893	Equus_asinus_asinus
ENSCVAG00000004044	ddx28	91	50.579	ENSECAG00000006451	DDX28	97	49.446	Equus_caballus
ENSCVAG00000004044	ddx28	72	44.039	ENSEEUG00000005017	DDX28	94	44.039	Erinaceus_europaeus
ENSCVAG00000004044	ddx28	90	66.863	ENSELUG00000005302	ddx28	98	66.408	Esox_lucius
ENSCVAG00000004044	ddx28	90	50.586	ENSFCAG00000012858	DDX28	94	50.586	Felis_catus
ENSCVAG00000004044	ddx28	100	78.712	ENSFHEG00000012573	ddx28	99	78.712	Fundulus_heteroclitus
ENSCVAG00000004044	ddx28	92	69.540	ENSGMOG00000017045	ddx28	98	69.540	Gadus_morhua
ENSCVAG00000004044	ddx28	91	44.466	ENSGALG00000048700	DDX28	89	45.315	Gallus_gallus
ENSCVAG00000004044	ddx28	99	81.917	ENSGAFG00000009249	ddx28	99	81.917	Gambusia_affinis
ENSCVAG00000004044	ddx28	91	74.902	ENSGACG00000016367	ddx28	95	74.902	Gasterosteus_aculeatus
ENSCVAG00000004044	ddx28	79	47.651	ENSGAGG00000004565	DDX28	97	47.651	Gopherus_agassizii
ENSCVAG00000004044	ddx28	90	49.609	ENSGGOG00000001220	DDX28	94	49.609	Gorilla_gorilla
ENSCVAG00000004044	ddx28	99	75.223	ENSHBUG00000001016	ddx28	99	75.223	Haplochromis_burtoni
ENSCVAG00000004044	ddx28	99	68.773	ENSHCOG00000017590	ddx28	98	68.773	Hippocampus_comes
ENSCVAG00000004044	ddx28	90	64.484	ENSIPUG00000017350	Ddx28	89	64.484	Ictalurus_punctatus
ENSCVAG00000004044	ddx28	91	48.936	ENSSTOG00000002064	DDX28	94	48.936	Ictidomys_tridecemlineatus
ENSCVAG00000004044	ddx28	94	47.778	ENSJJAG00000012460	-	96	47.778	Jaculus_jaculus
ENSCVAG00000004044	ddx28	100	76.460	ENSKMAG00000018183	ddx28	99	76.460	Kryptolebias_marmoratus
ENSCVAG00000004044	ddx28	99	74.468	ENSLBEG00000006072	ddx28	99	74.468	Labrus_bergylta
ENSCVAG00000004044	ddx28	91	57.059	ENSLACG00000005578	DDX28	88	57.059	Latimeria_chalumnae
ENSCVAG00000004044	ddx28	98	58.621	ENSLOCG00000017604	ddx28	98	58.621	Lepisosteus_oculatus
ENSCVAG00000004044	ddx28	91	50.194	ENSLAFG00000031239	DDX28	96	49.526	Loxodonta_africana
ENSCVAG00000004044	ddx28	90	50.195	ENSMMUG00000010836	DDX28	92	50.195	Macaca_mulatta
ENSCVAG00000004044	ddx28	99	72.022	ENSMAMG00000020220	ddx28	98	72.022	Mastacembelus_armatus
ENSCVAG00000004044	ddx28	99	75.223	ENSMZEG00005009292	ddx28	99	75.223	Maylandia_zebra
ENSCVAG00000004044	ddx28	91	40.196	ENSMICG00000012346	-	96	39.326	Microcebus_murinus
ENSCVAG00000004044	ddx28	90	50.489	ENSMOCG00000009815	Ddx28	94	50.489	Microtus_ochrogaster
ENSCVAG00000004044	ddx28	100	71.201	ENSMMOG00000000270	ddx28	99	71.201	Mola_mola
ENSCVAG00000004044	ddx28	91	51.468	ENSMODG00000005303	DDX28	93	51.468	Monodelphis_domestica
ENSCVAG00000004044	ddx28	99	72.809	ENSMALG00000008864	ddx28	99	72.809	Monopterus_albus
ENSCVAG00000004044	ddx28	90	50.098	MGP_CAROLIEiJ_G0031510	Ddx28	94	50.098	Mus_caroli
ENSCVAG00000004044	ddx28	90	50.487	ENSMUSG00000045538	Ddx28	94	50.487	Mus_musculus
ENSCVAG00000004044	ddx28	90	50.485	MGP_PahariEiJ_G0023110	Ddx28	94	50.485	Mus_pahari
ENSCVAG00000004044	ddx28	90	50.487	MGP_SPRETEiJ_G0032628	Ddx28	94	50.487	Mus_spretus
ENSCVAG00000004044	ddx28	65	53.388	ENSMPUG00000006915	DDX28	91	53.388	Mustela_putorius_furo
ENSCVAG00000004044	ddx28	93	49.156	ENSMLUG00000005899	DDX28	97	49.156	Myotis_lucifugus
ENSCVAG00000004044	ddx28	90	50.778	ENSNGAG00000015762	Ddx28	93	50.584	Nannospalax_galili
ENSCVAG00000004044	ddx28	99	75.540	ENSNBRG00000001337	ddx28	100	75.540	Neolamprologus_brichardi
ENSCVAG00000004044	ddx28	99	75.401	ENSONIG00000020597	ddx28	99	75.401	Oreochromis_niloticus
ENSCVAG00000004044	ddx28	90	51.072	ENSOCUG00000023074	DDX28	94	51.267	Oryctolagus_cuniculus
ENSCVAG00000004044	ddx28	98	74.818	ENSORLG00000011968	ddx28	99	74.818	Oryzias_latipes
ENSCVAG00000004044	ddx28	97	74.495	ENSORLG00020001951	ddx28	99	74.495	Oryzias_latipes_hni
ENSCVAG00000004044	ddx28	97	74.495	ENSORLG00015023030	ddx28	99	74.495	Oryzias_latipes_hsok
ENSCVAG00000004044	ddx28	100	72.535	ENSOMEG00000012445	ddx28	99	72.535	Oryzias_melastigma
ENSCVAG00000004044	ddx28	91	50.096	ENSOGAG00000016895	DDX28	94	50.096	Otolemur_garnettii
ENSCVAG00000004044	ddx28	79	49.330	ENSOARG00000003313	DDX28	99	49.330	Ovis_aries
ENSCVAG00000004044	ddx28	90	47.070	ENSPPAG00000036971	DDX28	93	47.070	Pan_paniscus
ENSCVAG00000004044	ddx28	90	50.977	ENSPPRG00000018322	DDX28	94	50.977	Panthera_pardus
ENSCVAG00000004044	ddx28	90	49.219	ENSPTIG00000006444	DDX28	93	49.219	Panthera_tigris_altaica
ENSCVAG00000004044	ddx28	90	49.414	ENSPTRG00000008258	DDX28	94	49.414	Pan_troglodytes
ENSCVAG00000004044	ddx28	90	64.961	ENSPKIG00000021200	ddx28	93	64.961	Paramormyrops_kingsleyae
ENSCVAG00000004044	ddx28	52	58.276	ENSPSIG00000001127	DDX28	95	58.885	Pelodiscus_sinensis
ENSCVAG00000004044	ddx28	99	66.429	ENSPMGG00000007908	ddx28	99	66.429	Periophthalmus_magnuspinnatus
ENSCVAG00000004044	ddx28	90	49.903	ENSPEMG00000003395	Ddx28	94	49.903	Peromyscus_maniculatus_bairdii
ENSCVAG00000004044	ddx28	51	47.552	ENSPMAG00000006983	DDX28	95	47.552	Petromyzon_marinus
ENSCVAG00000004044	ddx28	100	83.214	ENSPFOG00000020838	DDX28	99	83.214	Poecilia_formosa
ENSCVAG00000004044	ddx28	100	83.214	ENSPFOG00000020952	ddx28	98	83.214	Poecilia_formosa
ENSCVAG00000004044	ddx28	100	82.857	ENSPLAG00000016292	ddx28	98	82.857	Poecilia_latipinna
ENSCVAG00000004044	ddx28	100	83.214	ENSPMEG00000011311	ddx28	98	83.214	Poecilia_mexicana
ENSCVAG00000004044	ddx28	100	82.679	ENSPREG00000002899	ddx28	98	82.679	Poecilia_reticulata
ENSCVAG00000004044	ddx28	90	49.027	ENSPPYG00000007481	DDX28	94	49.027	Pongo_abelii
ENSCVAG00000004044	ddx28	95	48.980	ENSPCOG00000024632	DDX28	97	48.980	Propithecus_coquereli
ENSCVAG00000004044	ddx28	99	75.401	ENSPNYG00000018804	ddx28	99	75.401	Pundamilia_nyererei
ENSCVAG00000004044	ddx28	90	62.035	ENSPNAG00000014597	ddx28	95	62.035	Pygocentrus_nattereri
ENSCVAG00000004044	ddx28	90	49.320	ENSRNOG00000019817	Ddx28	94	49.320	Rattus_norvegicus
ENSCVAG00000004044	ddx28	90	63.086	ENSSFOG00015010181	ddx28	95	61.905	Scleropages_formosus
ENSCVAG00000004044	ddx28	91	75.984	ENSSMAG00000006831	ddx28	95	75.984	Scophthalmus_maximus
ENSCVAG00000004044	ddx28	100	74.517	ENSSDUG00000003257	ddx28	99	74.517	Seriola_dumerili
ENSCVAG00000004044	ddx28	100	73.768	ENSSLDG00000004513	ddx28	99	73.768	Seriola_lalandi_dorsalis
ENSCVAG00000004044	ddx28	91	50.097	ENSSARG00000014169	DDX28	94	50.195	Sorex_araneus
ENSCVAG00000004044	ddx28	99	75.404	ENSSPAG00000000988	ddx28	99	75.404	Stegastes_partitus
ENSCVAG00000004044	ddx28	93	49.434	ENSSSCG00000026038	DDX28	96	49.623	Sus_scrofa
ENSCVAG00000004044	ddx28	92	73.837	ENSTRUG00000007815	ddx28	93	73.837	Takifugu_rubripes
ENSCVAG00000004044	ddx28	90	75.498	ENSTNIG00000011352	ddx28	99	75.498	Tetraodon_nigroviridis
ENSCVAG00000004044	ddx28	76	63.380	ENSTBEG00000017695	DDX28	75	63.380	Tupaia_belangeri
ENSCVAG00000004044	ddx28	91	49.806	ENSUAMG00000016116	DDX28	96	48.885	Ursus_americanus
ENSCVAG00000004044	ddx28	77	51.598	ENSUMAG00000019200	DDX28	88	51.598	Ursus_maritimus
ENSCVAG00000004044	ddx28	74	45.606	ENSVVUG00000012876	DDX28	82	45.606	Vulpes_vulpes
ENSCVAG00000004044	ddx28	91	47.233	ENSXETG00000005435	ddx28	99	47.233	Xenopus_tropicalis
ENSCVAG00000004044	ddx28	98	82.696	ENSXCOG00000012364	ddx28	97	82.696	Xiphophorus_couchianus
ENSCVAG00000004044	ddx28	96	81.716	ENSXMAG00000019603	ddx28	97	81.716	Xiphophorus_maculatus