EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000004075 (Gene tree)
Gene ID: 107087784
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6684 bases
Position: chrKL652693.1:1100629-1107312
Accession: 107087784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021791	CSD	PF00313.22	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010907	YBX2-201	5395	XM_015379537	ENSCVAP00000021791	331 (aa)	XP_015235023	UPI0007429E17

Gene Model

Click here to download ENSCVAG00000004075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004075	YBX2	91	69.032	ENSAPOG00000012329	YBX2	99	68.358	Acanthochromis_polyacanthus
ENSCVAG00000004075	YBX2	91	71.569	ENSAOCG00000003847	YBX2	99	68.278	Amphiprion_ocellaris
ENSCVAG00000004075	YBX2	91	72.222	ENSAPEG00000014010	YBX2	99	68.882	Amphiprion_percula
ENSCVAG00000004075	YBX2	100	66.286	ENSACLG00000004460	YBX2	100	64.000	Astatotilapia_calliptera
ENSCVAG00000004075	YBX2	97	67.692	ENSCSEG00000002588	YBX2	93	69.156	Cynoglossus_semilaevis
ENSCVAG00000004075	YBX2	93	63.975	ENSELUG00000014487	YBX2	95	59.568	Esox_lucius
ENSCVAG00000004075	YBX2	97	81.288	ENSFHEG00000001823	YBX2	97	81.288	Fundulus_heteroclitus
ENSCVAG00000004075	YBX2	97	76.453	ENSGAFG00000005517	YBX2	99	72.121	Gambusia_affinis
ENSCVAG00000004075	YBX2	92	68.269	ENSGACG00000019392	-	99	65.976	Gasterosteus_aculeatus
ENSCVAG00000004075	YBX2	100	66.000	ENSHBUG00000002391	YBX2	100	63.714	Haplochromis_burtoni
ENSCVAG00000004075	YBX2	99	56.667	ENSHCOG00000004582	-	95	56.075	Hippocampus_comes
ENSCVAG00000004075	YBX2	100	61.877	ENSMAMG00000003631	YBX2	100	63.127	Mastacembelus_armatus
ENSCVAG00000004075	YBX2	100	66.286	ENSMZEG00005021709	YBX2	100	64.000	Maylandia_zebra
ENSCVAG00000004075	YBX2	100	65.903	ENSNBRG00000021159	YBX2	100	63.324	Neolamprologus_brichardi
ENSCVAG00000004075	YBX2	100	68.876	ENSONIG00000018954	YBX2	100	65.418	Oreochromis_niloticus
ENSCVAG00000004075	YBX2	88	68.227	ENSORLG00020010417	YBX2	88	63.422	Oryzias_latipes_hni
ENSCVAG00000004075	YBX2	100	64.897	ENSORLG00015007322	YBX2	88	63.717	Oryzias_latipes_hsok
ENSCVAG00000004075	YBX2	90	66.456	ENSOMEG00000010455	YBX2	99	67.251	Oryzias_melastigma
ENSCVAG00000004075	YBX2	97	78.049	ENSPFOG00000007181	YBX2	99	78.659	Poecilia_formosa
ENSCVAG00000004075	YBX2	97	78.462	ENSPLAG00000009381	YBX2	99	79.077	Poecilia_latipinna
ENSCVAG00000004075	YBX2	97	78.769	ENSPMEG00000002159	YBX2	99	79.692	Poecilia_mexicana
ENSCVAG00000004075	YBX2	84	82.500	ENSPREG00000013357	YBX2	94	80.769	Poecilia_reticulata
ENSCVAG00000004075	YBX2	100	66.286	ENSPNYG00000006649	YBX2	100	64.000	Pundamilia_nyererei
ENSCVAG00000004075	YBX2	97	52.615	ENSPNAG00000017142	YBX2	88	54.902	Pygocentrus_nattereri
ENSCVAG00000004075	YBX2	100	65.896	ENSSMAG00000009294	YBX2	94	72.050	Scophthalmus_maximus
ENSCVAG00000004075	YBX2	100	72.156	ENSSDUG00000020339	YBX2	100	72.156	Seriola_dumerili
ENSCVAG00000004075	YBX2	100	72.156	ENSSLDG00000010451	YBX2	100	72.156	Seriola_lalandi_dorsalis
ENSCVAG00000004075	YBX2	91	66.776	ENSTRUG00000011813	YBX2	93	69.408	Takifugu_rubripes
ENSCVAG00000004075	YBX2	95	63.125	ENSTNIG00000010139	YBX2	99	63.855	Tetraodon_nigroviridis
ENSCVAG00000004075	YBX2	88	79.252	ENSXMAG00000015755	YBX2	99	74.462	Xiphophorus_maculatus