EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000004138 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 3114 bases
Position: chrKL654428.1:35597-38710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021838	RVT_1	PF00078.27	3.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010804	-	3018	-	ENSCVAP00000021838	1005 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000004138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004138	-	83	39.612	ENSACIG00000009025	-	98	39.612	Amphilophus_citrinellus
ENSCVAG00000004138	-	98	38.040	ENSACIG00000007038	-	91	37.954	Amphilophus_citrinellus
ENSCVAG00000004138	-	98	35.000	ENSACIG00000012161	-	90	34.716	Amphilophus_citrinellus
ENSCVAG00000004138	-	98	34.808	ENSACIG00000010787	-	95	34.808	Amphilophus_citrinellus
ENSCVAG00000004138	-	84	39.370	ENSACIG00000013116	-	87	39.370	Amphilophus_citrinellus
ENSCVAG00000004138	-	96	33.985	ENSAMXG00000042811	-	91	33.985	Astyanax_mexicanus
ENSCVAG00000004138	-	97	38.652	ENSCPBG00000003842	-	76	38.652	Chrysemys_picta_bellii
ENSCVAG00000004138	-	78	33.081	ENSELUG00000004618	-	73	33.081	Esox_lucius
ENSCVAG00000004138	-	76	34.496	ENSELUG00000004597	-	83	35.316	Esox_lucius
ENSCVAG00000004138	-	89	40.895	ENSFHEG00000007211	-	96	39.147	Fundulus_heteroclitus
ENSCVAG00000004138	-	99	41.683	ENSFHEG00000022106	-	96	42.222	Fundulus_heteroclitus
ENSCVAG00000004138	-	98	39.000	ENSFHEG00000002853	-	91	39.214	Fundulus_heteroclitus
ENSCVAG00000004138	-	97	38.363	ENSFHEG00000002865	-	88	38.363	Fundulus_heteroclitus
ENSCVAG00000004138	-	56	38.726	ENSGMOG00000005227	-	98	38.726	Gadus_morhua
ENSCVAG00000004138	-	68	32.955	ENSHCOG00000007436	-	54	30.629	Hippocampus_comes
ENSCVAG00000004138	-	98	33.180	ENSHCOG00000000471	-	91	33.180	Hippocampus_comes
ENSCVAG00000004138	-	98	32.361	ENSHCOG00000007397	-	93	32.361	Hippocampus_comes
ENSCVAG00000004138	-	98	32.490	ENSHCOG00000007389	-	94	32.490	Hippocampus_comes
ENSCVAG00000004138	-	69	39.278	ENSLBEG00000004576	-	87	39.278	Labrus_bergylta
ENSCVAG00000004138	-	64	40.521	ENSLBEG00000006732	-	81	40.521	Labrus_bergylta
ENSCVAG00000004138	-	77	38.673	ENSLBEG00000003745	-	92	38.690	Labrus_bergylta
ENSCVAG00000004138	-	73	34.153	ENSLACG00000006357	-	96	34.153	Latimeria_chalumnae
ENSCVAG00000004138	-	54	34.513	ENSLACG00000009240	-	96	34.513	Latimeria_chalumnae
ENSCVAG00000004138	-	77	35.767	ENSLOCG00000011928	-	73	35.767	Lepisosteus_oculatus
ENSCVAG00000004138	-	51	39.212	ENSLOCG00000002743	-	100	39.212	Lepisosteus_oculatus
ENSCVAG00000004138	-	77	36.518	ENSLOCG00000017064	-	74	36.518	Lepisosteus_oculatus
ENSCVAG00000004138	-	99	34.355	ENSMAMG00000019985	-	93	35.289	Mastacembelus_armatus
ENSCVAG00000004138	-	99	38.418	ENSONIG00000020875	-	91	38.418	Oreochromis_niloticus
ENSCVAG00000004138	-	97	31.673	ENSOMEG00000015368	-	99	32.331	Oryzias_melastigma
ENSCVAG00000004138	-	90	37.025	ENSPMGG00000017392	-	98	37.025	Periophthalmus_magnuspinnatus
ENSCVAG00000004138	-	85	41.611	ENSPMGG00000001593	-	90	41.611	Periophthalmus_magnuspinnatus
ENSCVAG00000004138	-	96	38.300	ENSPLAG00000011817	-	99	38.300	Poecilia_latipinna
ENSCVAG00000004138	-	96	39.523	ENSPLAG00000011810	-	94	39.523	Poecilia_latipinna
ENSCVAG00000004138	-	77	41.708	ENSPLAG00000023379	-	96	41.708	Poecilia_latipinna
ENSCVAG00000004138	-	99	39.050	ENSPLAG00000022994	-	96	39.050	Poecilia_latipinna
ENSCVAG00000004138	-	98	36.638	ENSPMEG00000008574	-	96	36.638	Poecilia_mexicana
ENSCVAG00000004138	-	98	39.882	ENSPMEG00000003431	-	96	39.882	Poecilia_mexicana
ENSCVAG00000004138	-	98	37.196	ENSPREG00000005456	-	88	37.196	Poecilia_reticulata
ENSCVAG00000004138	-	98	39.296	ENSPREG00000012484	-	91	39.296	Poecilia_reticulata
ENSCVAG00000004138	-	98	37.670	ENSPREG00000005756	-	93	37.670	Poecilia_reticulata
ENSCVAG00000004138	-	96	33.333	ENSPNAG00000016635	-	88	33.333	Pygocentrus_nattereri
ENSCVAG00000004138	-	78	33.413	ENSPNAG00000017596	-	84	33.413	Pygocentrus_nattereri
ENSCVAG00000004138	-	55	34.907	ENSPNAG00000014625	-	55	34.907	Pygocentrus_nattereri
ENSCVAG00000004138	-	78	38.278	ENSPNAG00000003539	-	68	38.278	Pygocentrus_nattereri
ENSCVAG00000004138	-	95	32.989	ENSPNAG00000021754	-	89	32.989	Pygocentrus_nattereri
ENSCVAG00000004138	-	76	38.160	ENSPNAG00000007038	-	69	37.956	Pygocentrus_nattereri
ENSCVAG00000004138	-	76	43.125	ENSXCOG00000008881	-	90	43.125	Xiphophorus_couchianus
ENSCVAG00000004138	-	98	33.927	ENSXCOG00000013093	-	93	33.927	Xiphophorus_couchianus
ENSCVAG00000004138	-	98	37.537	ENSXMAG00000028672	-	92	37.537	Xiphophorus_maculatus