EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004170 (Gene tree)
Gene ID: 107082779
Gene Symbol: esrp2
Alias: cb404|rbm35b|sb:cb404|zgc:77254
Full Name: epithelial splicing regulatory protein 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 24010 bases
Position: chrKL652561.1:57097-81106
Accession: 107082779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021811	RRM_1	PF00076.22	4.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010850	-	3708	XM_015371628	ENSCVAP00000021811	742 (aa)	XP_015227114	UPI000742A766
ENSCVAT00000010883	-	2109	-	ENSCVAP00000002938	702 (aa)	-	-
ENSCVAT00000010839	-	3809	XM_015371625	ENSCVAP00000002962	717 (aa)	XP_015227111	UPI0007427503
ENSCVAT00000010860	-	2359	-	ENSCVAP00000021806	696 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000004170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004170	esrp2	53	32.857	ENSCVAG00000014097	hnrnph1	86	32.857
ENSCVAG00000004170	esrp2	69	38.272	ENSCVAG00000010461	HNRNPH3	96	36.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004170	esrp2	100	90.175	ENSAOCG00000017713	esrp2	100	90.713	Amphiprion_ocellaris
ENSCVAG00000004170	esrp2	100	85.464	ENSCSEG00000011686	esrp2	100	85.868	Cynoglossus_semilaevis
ENSCVAG00000004170	esrp2	100	80.563	ENSDARG00000018814	esrp2	100	79.357	Danio_rerio
ENSCVAG00000004170	esrp2	100	93.540	ENSFHEG00000012728	esrp2	100	94.078	Fundulus_heteroclitus
ENSCVAG00000004170	esrp2	99	71.042	ENSGALG00000003374	ESRP2	99	71.757	Gallus_gallus
ENSCVAG00000004170	esrp2	100	89.960	ENSGAFG00000009225	esrp2	100	90.094	Gambusia_affinis
ENSCVAG00000004170	esrp2	100	88.054	ENSGACG00000016359	esrp2	100	87.517	Gasterosteus_aculeatus
ENSCVAG00000004170	esrp2	99	78.331	ENSLOCG00000008062	esrp2	99	78.062	Lepisosteus_oculatus
ENSCVAG00000004170	esrp2	100	78.209	ENSPKIG00000021343	esrp2	100	79.095	Paramormyrops_kingsleyae
ENSCVAG00000004170	esrp2	100	92.328	ENSPLAG00000016250	esrp2	100	92.194	Poecilia_latipinna
ENSCVAG00000004170	esrp2	100	91.031	ENSPREG00000002991	esrp2	100	91.165	Poecilia_reticulata
ENSCVAG00000004170	esrp2	53	84.146	ENSSHAG00000000063	-	99	63.599	Sarcophilus_harrisii
ENSCVAG00000004170	esrp2	100	87.618	ENSTRUG00000007941	esrp2	100	88.022	Takifugu_rubripes