EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004187 (Gene tree)
Gene ID: 107102064
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14160 bases
Position: chrKL653696.1:134872-149031
Accession: 107102064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021857	RRM_1	PF00076.22	6.3e-14	1	1
ENSCVAP00000021871	RRM_1	PF00076.22	6.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010718	-	3859	-	ENSCVAP00000021871	609 (aa)	-	UPI000742A6F6
ENSCVAT00000010736	-	3767	XM_015401227	ENSCVAP00000021857	609 (aa)	XP_015256713	UPI000742A6F6

Gene Model

Click here to download ENSCVAG00000004187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004187	-	68	37.838	ENSCVAG00000013288	zgc:123010	52	39.423
ENSCVAG00000004187	-	53	41.071	ENSCVAG00000006564	-	60	37.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004187	-	67	36.486	ENSAPOG00000001034	-	71	36.486	Acanthochromis_polyacanthus
ENSCVAG00000004187	-	100	56.916	ENSAPOG00000022403	-	95	57.257	Acanthochromis_polyacanthus
ENSCVAG00000004187	-	66	37.838	ENSAPOG00000019633	zgc:123010	57	38.647	Acanthochromis_polyacanthus
ENSCVAG00000004187	-	73	37.712	ENSAPOG00000005058	si:dkey-33c12.4	58	40.299	Acanthochromis_polyacanthus
ENSCVAG00000004187	-	100	59.141	ENSAOCG00000000431	-	95	57.803	Amphiprion_ocellaris
ENSCVAG00000004187	-	53	44.860	ENSAOCG00000020066	si:dkey-33c12.4	57	41.476	Amphiprion_ocellaris
ENSCVAG00000004187	-	100	59.019	ENSAPEG00000023603	-	95	57.686	Amphiprion_percula
ENSCVAG00000004187	-	52	37.838	ENSATEG00000001220	zgc:123010	52	40.385	Anabas_testudineus
ENSCVAG00000004187	-	71	40.807	ENSATEG00000018885	si:dkey-33c12.4	61	42.537	Anabas_testudineus
ENSCVAG00000004187	-	100	56.667	ENSATEG00000018302	-	95	56.486	Anabas_testudineus
ENSCVAG00000004187	-	64	36.486	ENSACLG00000010188	zgc:123010	53	38.278	Astatotilapia_calliptera
ENSCVAG00000004187	-	100	55.626	ENSACLG00000003019	-	100	57.006	Astatotilapia_calliptera
ENSCVAG00000004187	-	75	35.833	ENSACLG00000014192	si:dkey-33c12.4	65	38.318	Astatotilapia_calliptera
ENSCVAG00000004187	-	57	39.437	ENSACLG00000012346	-	51	39.437	Astatotilapia_calliptera
ENSCVAG00000004187	-	77	42.945	ENSAMXG00000010871	si:dkey-33c12.4	58	46.973	Astyanax_mexicanus
ENSCVAG00000004187	-	51	38.028	ENSAMXG00000041967	zgc:123010	55	37.838	Astyanax_mexicanus
ENSCVAG00000004187	-	62	33.770	ENSCPBG00000024454	-	50	34.704	Chrysemys_picta_bellii
ENSCVAG00000004187	-	100	49.842	ENSCSEG00000002755	-	96	50.248	Cynoglossus_semilaevis
ENSCVAG00000004187	-	65	46.269	ENSDARG00000057890	si:dkey-33c12.4	57	46.269	Danio_rerio
ENSCVAG00000004187	-	56	36.620	ENSDARG00000039082	zgc:123010	55	40.000	Danio_rerio
ENSCVAG00000004187	-	51	35.048	ENSEBUG00000001368	-	56	32.828	Eptatretus_burgeri
ENSCVAG00000004187	-	83	39.587	ENSELUG00000002009	si:dkey-33c12.4	87	38.205	Esox_lucius
ENSCVAG00000004187	-	55	41.892	ENSELUG00000021447	-	58	41.892	Esox_lucius
ENSCVAG00000004187	-	82	44.380	ENSELUG00000001633	-	60	45.477	Esox_lucius
ENSCVAG00000004187	-	94	69.283	ENSFHEG00000009983	-	96	69.113	Fundulus_heteroclitus
ENSCVAG00000004187	-	68	37.838	ENSFHEG00000002306	zgc:123010	52	39.320	Fundulus_heteroclitus
ENSCVAG00000004187	-	52	42.222	ENSFHEG00000005521	si:dkey-33c12.4	59	38.281	Fundulus_heteroclitus
ENSCVAG00000004187	-	52	37.838	ENSGMOG00000018473	zgc:123010	77	36.364	Gadus_morhua
ENSCVAG00000004187	-	100	71.659	ENSGAFG00000016594	-	95	71.268	Gambusia_affinis
ENSCVAG00000004187	-	52	42.991	ENSGAFG00000017596	si:dkey-33c12.4	60	37.713	Gambusia_affinis
ENSCVAG00000004187	-	57	32.081	ENSGACG00000007620	zgc:123010	72	32.081	Gasterosteus_aculeatus
ENSCVAG00000004187	-	57	39.437	ENSHBUG00000016720	-	51	39.437	Haplochromis_burtoni
ENSCVAG00000004187	-	75	36.326	ENSHBUG00000010735	si:dkey-33c12.4	62	38.795	Haplochromis_burtoni
ENSCVAG00000004187	-	78	44.813	ENSIPUG00000005998	si:dkey-33c12.4	58	49.505	Ictalurus_punctatus
ENSCVAG00000004187	-	100	63.047	ENSKMAG00000006468	-	97	63.740	Kryptolebias_marmoratus
ENSCVAG00000004187	-	74	36.147	ENSKMAG00000016610	si:dkey-33c12.4	60	37.745	Kryptolebias_marmoratus
ENSCVAG00000004187	-	60	37.696	ENSLBEG00000017203	-	56	37.696	Labrus_bergylta
ENSCVAG00000004187	-	60	37.270	ENSLBEG00000021088	-	54	37.795	Labrus_bergylta
ENSCVAG00000004187	-	100	50.806	ENSLBEG00000028046	-	95	49.839	Labrus_bergylta
ENSCVAG00000004187	-	81	35.897	ENSLACG00000004602	-	64	38.404	Latimeria_chalumnae
ENSCVAG00000004187	-	51	36.620	ENSLACG00000009001	zgc:123010	64	36.620	Latimeria_chalumnae
ENSCVAG00000004187	-	75	45.833	ENSLOCG00000001861	-	71	43.117	Lepisosteus_oculatus
ENSCVAG00000004187	-	50	36.481	ENSLOCG00000008967	zgc:123010	52	38.605	Lepisosteus_oculatus
ENSCVAG00000004187	-	52	37.838	ENSMAMG00000001145	zgc:123010	69	37.838	Mastacembelus_armatus
ENSCVAG00000004187	-	69	38.926	ENSMAMG00000000111	si:dkey-33c12.4	60	40.048	Mastacembelus_armatus
ENSCVAG00000004187	-	99	49.373	ENSMAMG00000004311	-	70	61.628	Mastacembelus_armatus
ENSCVAG00000004187	-	53	39.437	ENSMZEG00005014740	-	65	39.437	Maylandia_zebra
ENSCVAG00000004187	-	100	56.101	ENSMZEG00005000585	-	100	57.643	Maylandia_zebra
ENSCVAG00000004187	-	64	36.486	ENSMZEG00005027733	zgc:123010	53	38.278	Maylandia_zebra
ENSCVAG00000004187	-	74	35.565	ENSMZEG00005014276	si:dkey-33c12.4	62	38.717	Maylandia_zebra
ENSCVAG00000004187	-	52	37.838	ENSMALG00000017698	zgc:123010	56	37.838	Monopterus_albus
ENSCVAG00000004187	-	90	36.097	ENSMALG00000002265	si:dkey-33c12.4	62	40.640	Monopterus_albus
ENSCVAG00000004187	-	100	54.777	ENSMALG00000003167	-	95	55.096	Monopterus_albus
ENSCVAG00000004187	-	53	36.486	ENSNBRG00000021157	zgc:123010	63	36.486	Neolamprologus_brichardi
ENSCVAG00000004187	-	100	57.052	ENSONIG00000007538	-	96	76.301	Oreochromis_niloticus
ENSCVAG00000004187	-	64	36.486	ENSONIG00000018353	zgc:123010	56	36.486	Oreochromis_niloticus
ENSCVAG00000004187	-	100	58.442	ENSORLG00000030385	-	95	57.561	Oryzias_latipes
ENSCVAG00000004187	-	58	38.873	ENSORLG00000029651	si:dkey-33c12.4	56	40.884	Oryzias_latipes
ENSCVAG00000004187	-	59	39.394	ENSORLG00020008750	si:dkey-33c12.4	52	40.331	Oryzias_latipes_hni
ENSCVAG00000004187	-	52	36.486	ENSORLG00020003457	zgc:123010	54	40.097	Oryzias_latipes_hni
ENSCVAG00000004187	-	80	31.778	ENSORLG00015008373	zgc:123010	52	31.778	Oryzias_latipes_hsok
ENSCVAG00000004187	-	100	58.509	ENSORLG00015008400	-	95	56.431	Oryzias_latipes_hsok
ENSCVAG00000004187	-	99	60.325	ENSOMEG00000009428	-	95	59.283	Oryzias_melastigma
ENSCVAG00000004187	-	63	35.223	ENSOMEG00000003408	zgc:123010	53	31.214	Oryzias_melastigma
ENSCVAG00000004187	-	81	45.200	ENSPKIG00000011819	-	55	49.123	Paramormyrops_kingsleyae
ENSCVAG00000004187	-	77	73.585	ENSPFOG00000017092	-	96	72.746	Poecilia_formosa
ENSCVAG00000004187	-	99	69.156	ENSPMEG00000009905	-	97	71.082	Poecilia_mexicana
ENSCVAG00000004187	-	99	71.036	ENSPREG00000016861	-	97	71.096	Poecilia_reticulata
ENSCVAG00000004187	-	64	36.486	ENSPNYG00000007893	zgc:123010	53	37.981	Pundamilia_nyererei
ENSCVAG00000004187	-	100	55.943	ENSPNYG00000001047	-	100	57.484	Pundamilia_nyererei
ENSCVAG00000004187	-	75	35.625	ENSPNYG00000018262	si:dkey-33c12.4	62	38.717	Pundamilia_nyererei
ENSCVAG00000004187	-	51	38.028	ENSPNAG00000007579	zgc:123010	57	37.838	Pygocentrus_nattereri
ENSCVAG00000004187	-	64	47.475	ENSPNAG00000018386	si:dkey-33c12.4	58	46.135	Pygocentrus_nattereri
ENSCVAG00000004187	-	73	41.280	ENSSFOG00015009199	-	60	43.596	Scleropages_formosus
ENSCVAG00000004187	-	70	33.231	ENSSFOG00015021394	zgc:123010	60	35.341	Scleropages_formosus
ENSCVAG00000004187	-	78	42.798	ENSSFOG00015005186	-	58	48.522	Scleropages_formosus
ENSCVAG00000004187	-	99	57.835	ENSSMAG00000010960	-	95	56.019	Scophthalmus_maximus
ENSCVAG00000004187	-	80	35.644	ENSSMAG00000008147	si:dkey-33c12.4	60	38.942	Scophthalmus_maximus
ENSCVAG00000004187	-	59	37.838	ENSSMAG00000021096	-	54	37.838	Scophthalmus_maximus
ENSCVAG00000004187	-	55	37.838	ENSSMAG00000002904	zgc:123010	55	39.524	Scophthalmus_maximus
ENSCVAG00000004187	-	73	38.958	ENSSDUG00000003213	si:dkey-33c12.4	63	40.097	Seriola_dumerili
ENSCVAG00000004187	-	57	31.792	ENSSDUG00000008651	zgc:123010	52	31.792	Seriola_dumerili
ENSCVAG00000004187	-	99	58.654	ENSSDUG00000010976	-	99	58.280	Seriola_dumerili
ENSCVAG00000004187	-	52	37.838	ENSSDUG00000014026	-	53	36.058	Seriola_dumerili
ENSCVAG00000004187	-	57	31.792	ENSSLDG00000019386	zgc:123010	54	31.214	Seriola_lalandi_dorsalis
ENSCVAG00000004187	-	96	58.569	ENSSLDG00000012846	-	99	58.678	Seriola_lalandi_dorsalis
ENSCVAG00000004187	-	65	40.097	ENSSLDG00000009448	si:dkey-33c12.4	59	39.855	Seriola_lalandi_dorsalis
ENSCVAG00000004187	-	74	36.229	ENSSPAG00000022577	-	58	39.078	Stegastes_partitus
ENSCVAG00000004187	-	100	58.439	ENSSPAG00000004843	-	95	58.730	Stegastes_partitus
ENSCVAG00000004187	-	67	39.189	ENSTRUG00000024824	zgc:123010	57	39.189	Takifugu_rubripes
ENSCVAG00000004187	-	99	40.917	ENSTRUG00000000057	-	95	39.187	Takifugu_rubripes