EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004221 (Gene tree)
Gene ID: 107081873
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6969 bases
Position: chrKL652544.1:1816066-1823034
Accession: 107081873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003058	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010670	-	2532	XM_015370217	ENSCVAP00000003058	266 (aa)	XP_015225703	UPI000742975E

Gene Model

Click here to download ENSCVAG00000004221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004221	srprb	71	30.319	ENSCVAG00000001271	arf3b	96	30.319
ENSCVAG00000004221	srprb	50	30.882	ENSCVAG00000013902	-	80	30.882
ENSCVAG00000004221	srprb	64	30.409	ENSCVAG00000018314	-	88	30.409
ENSCVAG00000004221	srprb	71	30.319	ENSCVAG00000013760	-	84	30.319
ENSCVAG00000004221	srprb	64	30.409	ENSCVAG00000021619	-	88	30.409
ENSCVAG00000004221	srprb	64	30.994	ENSCVAG00000000745	arf2b	87	30.994
ENSCVAG00000004221	srprb	64	30.994	ENSCVAG00000013374	-	88	30.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004221	srprb	100	88.433	ENSAPOG00000021219	srprb	97	88.433	Acanthochromis_polyacanthus
ENSCVAG00000004221	srprb	100	86.466	ENSACIG00000014621	srprb	100	86.466	Amphilophus_citrinellus
ENSCVAG00000004221	srprb	99	87.452	ENSAOCG00000017265	srprb	95	87.452	Amphiprion_ocellaris
ENSCVAG00000004221	srprb	100	86.940	ENSAPEG00000024541	srprb	86	86.940	Amphiprion_percula
ENSCVAG00000004221	srprb	100	87.218	ENSATEG00000014016	srprb	97	87.218	Anabas_testudineus
ENSCVAG00000004221	srprb	99	87.547	ENSACLG00000016748	srprb	96	87.547	Astatotilapia_calliptera
ENSCVAG00000004221	srprb	100	69.925	ENSAMXG00000044118	srprb	100	69.925	Astyanax_mexicanus
ENSCVAG00000004221	srprb	100	84.586	ENSCSEG00000017194	srprb	97	84.586	Cynoglossus_semilaevis
ENSCVAG00000004221	srprb	100	69.173	ENSDARG00000030949	srprb	100	69.173	Danio_rerio
ENSCVAG00000004221	srprb	97	81.467	ENSELUG00000009740	srprb	96	81.467	Esox_lucius
ENSCVAG00000004221	srprb	100	91.729	ENSFHEG00000006004	srprb	100	91.729	Fundulus_heteroclitus
ENSCVAG00000004221	srprb	100	81.203	ENSGMOG00000002081	srprb	98	81.203	Gadus_morhua
ENSCVAG00000004221	srprb	99	90.909	ENSGAFG00000012593	srprb	99	90.909	Gambusia_affinis
ENSCVAG00000004221	srprb	100	86.842	ENSGACG00000009891	srprb	98	86.842	Gasterosteus_aculeatus
ENSCVAG00000004221	srprb	99	87.547	ENSHBUG00000002145	srprb	96	87.547	Haplochromis_burtoni
ENSCVAG00000004221	srprb	100	83.459	ENSHCOG00000007732	srprb	99	83.459	Hippocampus_comes
ENSCVAG00000004221	srprb	100	66.667	ENSIPUG00000004177	srprb	100	66.667	Ictalurus_punctatus
ENSCVAG00000004221	srprb	100	84.962	ENSKMAG00000020736	srprb	100	84.962	Kryptolebias_marmoratus
ENSCVAG00000004221	srprb	100	86.842	ENSLBEG00000021483	srprb	97	86.842	Labrus_bergylta
ENSCVAG00000004221	srprb	97	71.154	ENSLOCG00000009740	srprb	87	71.538	Lepisosteus_oculatus
ENSCVAG00000004221	srprb	100	87.218	ENSMAMG00000011876	srprb	97	87.218	Mastacembelus_armatus
ENSCVAG00000004221	srprb	97	87.259	ENSMZEG00005016621	srprb	100	87.259	Maylandia_zebra
ENSCVAG00000004221	srprb	100	86.090	ENSMMOG00000012550	srprb	98	86.090	Mola_mola
ENSCVAG00000004221	srprb	100	85.714	ENSMALG00000012595	srprb	97	85.714	Monopterus_albus
ENSCVAG00000004221	srprb	73	87.179	ENSNBRG00000004699	srprb	91	80.930	Neolamprologus_brichardi
ENSCVAG00000004221	srprb	99	87.121	ENSONIG00000003788	srprb	79	87.121	Oreochromis_niloticus
ENSCVAG00000004221	srprb	100	82.331	ENSORLG00000006430	srprb	97	82.331	Oryzias_latipes
ENSCVAG00000004221	srprb	100	82.707	ENSORLG00020003413	srprb	97	82.707	Oryzias_latipes_hni
ENSCVAG00000004221	srprb	100	82.707	ENSORLG00015000166	srprb	97	82.707	Oryzias_latipes_hsok
ENSCVAG00000004221	srprb	100	82.707	ENSOMEG00000012735	srprb	97	82.707	Oryzias_melastigma
ENSCVAG00000004221	srprb	100	68.539	ENSPKIG00000013147	srprb	99	68.539	Paramormyrops_kingsleyae
ENSCVAG00000004221	srprb	100	80.075	ENSPMGG00000014061	srprb	97	80.075	Periophthalmus_magnuspinnatus
ENSCVAG00000004221	srprb	99	90.909	ENSPFOG00000011347	srprb	96	90.909	Poecilia_formosa
ENSCVAG00000004221	srprb	97	91.860	ENSPLAG00000001156	srprb	100	91.860	Poecilia_latipinna
ENSCVAG00000004221	srprb	97	90.698	ENSPMEG00000012169	srprb	100	90.698	Poecilia_mexicana
ENSCVAG00000004221	srprb	97	89.922	ENSPREG00000001449	srprb	100	89.922	Poecilia_reticulata
ENSCVAG00000004221	srprb	99	87.547	ENSPNYG00000005911	srprb	96	87.547	Pundamilia_nyererei
ENSCVAG00000004221	srprb	100	71.053	ENSPNAG00000009983	srprb	100	71.053	Pygocentrus_nattereri
ENSCVAG00000004221	srprb	97	73.563	ENSSFOG00015019355	srprb	97	73.563	Scleropages_formosus
ENSCVAG00000004221	srprb	100	85.338	ENSSMAG00000013202	srprb	97	85.338	Scophthalmus_maximus
ENSCVAG00000004221	srprb	100	87.594	ENSSDUG00000018746	srprb	91	87.594	Seriola_dumerili
ENSCVAG00000004221	srprb	100	87.970	ENSSLDG00000020560	srprb	97	87.970	Seriola_lalandi_dorsalis
ENSCVAG00000004221	srprb	99	88.973	ENSSPAG00000008898	srprb	95	88.973	Stegastes_partitus
ENSCVAG00000004221	srprb	100	83.835	ENSTRUG00000022463	srprb	97	83.835	Takifugu_rubripes
ENSCVAG00000004221	srprb	98	82.061	ENSTNIG00000007725	srprb	100	82.061	Tetraodon_nigroviridis
ENSCVAG00000004221	srprb	97	91.473	ENSXCOG00000012585	srprb	100	91.473	Xiphophorus_couchianus
ENSCVAG00000004221	srprb	97	91.085	ENSXMAG00000028725	srprb	100	91.085	Xiphophorus_maculatus