EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004222 (Gene tree)
Gene ID: 107099193
Gene Symbol: -
Alias: -
Full Name: zinc finger protein ZFMSA12A-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 3997 bases
Position: chrKL653344.1:51875-55871
Accession: 107099193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003072	zf-C2H2	PF00096.26	1.4e-37	1	5
ENSCVAP00000003072	zf-C2H2	PF00096.26	1.4e-37	2	5
ENSCVAP00000003072	zf-C2H2	PF00096.26	1.4e-37	3	5
ENSCVAP00000003072	zf-C2H2	PF00096.26	1.4e-37	4	5
ENSCVAP00000003072	zf-C2H2	PF00096.26	1.4e-37	5	5
ENSCVAP00000003072	zf-met	PF12874.7	2e-08	1	2
ENSCVAP00000003072	zf-met	PF12874.7	2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010661	-	2163	XM_015397228	ENSCVAP00000003072	648 (aa)	XP_015252714	-

Gene Model

Click here to download ENSCVAG00000004222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004222	-	51	37.722	ENSCVAG00000023054	-	64	37.722
ENSCVAG00000004222	-	51	38.542	ENSCVAG00000012343	-	90	36.970
ENSCVAG00000004222	-	51	34.247	ENSCVAG00000008200	-	84	31.502
ENSCVAG00000004222	-	54	32.343	ENSCVAG00000008206	-	83	32.343
ENSCVAG00000004222	-	51	39.837	ENSCVAG00000000419	-	71	39.837
ENSCVAG00000004222	-	53	38.333	ENSCVAG00000006673	-	54	38.333
ENSCVAG00000004222	-	51	33.571	ENSCVAG00000000144	-	65	33.571
ENSCVAG00000004222	-	65	32.821	ENSCVAG00000002284	-	65	34.872
ENSCVAG00000004222	-	74	32.283	ENSCVAG00000005112	-	92	31.871
ENSCVAG00000004222	-	52	31.307	ENSCVAG00000014622	-	68	31.307
ENSCVAG00000004222	-	55	36.818	ENSCVAG00000010442	-	97	41.420
ENSCVAG00000004222	-	58	40.152	ENSCVAG00000012284	-	79	40.152
ENSCVAG00000004222	-	55	32.448	ENSCVAG00000001568	-	74	32.828
ENSCVAG00000004222	-	51	37.083	ENSCVAG00000018383	-	85	37.083
ENSCVAG00000004222	-	55	33.571	ENSCVAG00000002506	-	99	33.571
ENSCVAG00000004222	-	51	32.986	ENSCVAG00000017511	-	86	32.986
ENSCVAG00000004222	-	51	37.500	ENSCVAG00000017515	-	76	37.436
ENSCVAG00000004222	-	61	36.036	ENSCVAG00000003497	-	84	35.811
ENSCVAG00000004222	-	51	35.088	ENSCVAG00000000423	-	88	38.071
ENSCVAG00000004222	-	63	31.507	ENSCVAG00000012228	-	84	37.079
ENSCVAG00000004222	-	53	39.086	ENSCVAG00000016883	-	50	39.086
ENSCVAG00000004222	-	54	46.667	ENSCVAG00000012520	-	74	46.667
ENSCVAG00000004222	-	61	30.286	ENSCVAG00000003514	-	73	31.212
ENSCVAG00000004222	-	51	34.173	ENSCVAG00000019097	-	63	44.604
ENSCVAG00000004222	-	51	39.247	ENSCVAG00000016964	-	96	39.333
ENSCVAG00000004222	-	53	32.768	ENSCVAG00000020126	-	71	32.768
ENSCVAG00000004222	-	59	38.554	ENSCVAG00000002242	-	90	38.554
ENSCVAG00000004222	-	53	32.377	ENSCVAG00000020938	-	92	31.802
ENSCVAG00000004222	-	64	31.699	ENSCVAG00000014269	-	97	31.915
ENSCVAG00000004222	-	56	43.976	ENSCVAG00000020745	-	93	43.976
ENSCVAG00000004222	-	51	37.912	ENSCVAG00000009827	-	97	37.017
ENSCVAG00000004222	-	55	37.615	ENSCVAG00000019537	-	78	40.964
ENSCVAG00000004222	-	61	32.394	ENSCVAG00000000227	-	78	33.219
ENSCVAG00000004222	-	51	33.071	ENSCVAG00000005494	-	90	37.079
ENSCVAG00000004222	-	54	36.139	ENSCVAG00000009752	-	56	36.139
ENSCVAG00000004222	-	65	38.462	ENSCVAG00000012543	-	95	37.778
ENSCVAG00000004222	-	51	33.852	ENSCVAG00000021225	-	92	46.552
ENSCVAG00000004222	-	54	36.810	ENSCVAG00000006460	-	68	40.288
ENSCVAG00000004222	-	65	34.959	ENSCVAG00000003434	-	78	36.937
ENSCVAG00000004222	-	54	32.364	ENSCVAG00000003433	-	97	32.364
ENSCVAG00000004222	-	52	41.573	ENSCVAG00000005507	-	91	41.573
ENSCVAG00000004222	-	52	32.092	ENSCVAG00000016862	-	96	31.232
ENSCVAG00000004222	-	51	31.944	ENSCVAG00000001609	-	74	37.179
ENSCVAG00000004222	-	52	35.644	ENSCVAG00000002305	-	75	36.000
ENSCVAG00000004222	-	53	38.554	ENSCVAG00000003630	-	54	38.554
ENSCVAG00000004222	-	51	35.874	ENSCVAG00000012216	-	94	37.563
ENSCVAG00000004222	-	73	30.556	ENSCVAG00000007684	patz1	69	30.899
ENSCVAG00000004222	-	51	33.213	ENSCVAG00000001417	-	97	33.213
ENSCVAG00000004222	-	51	36.946	ENSCVAG00000019767	-	55	38.849
ENSCVAG00000004222	-	51	30.719	ENSCVAG00000019764	-	64	31.907
ENSCVAG00000004222	-	51	41.011	ENSCVAG00000012399	-	86	41.011
ENSCVAG00000004222	-	55	40.244	ENSCVAG00000021107	-	98	34.902
ENSCVAG00000004222	-	51	40.964	ENSCVAG00000002252	-	91	40.964
ENSCVAG00000004222	-	54	32.862	ENSCVAG00000008535	-	67	32.862
ENSCVAG00000004222	-	62	39.548	ENSCVAG00000006389	-	93	36.607
ENSCVAG00000004222	-	96	33.803	ENSCVAG00000007035	-	92	33.803
ENSCVAG00000004222	-	54	30.612	ENSCVAG00000014404	-	91	30.620
ENSCVAG00000004222	-	51	38.889	ENSCVAG00000002833	-	66	40.102
ENSCVAG00000004222	-	51	40.887	ENSCVAG00000017890	-	85	40.102
ENSCVAG00000004222	-	53	42.254	ENSCVAG00000009747	-	57	42.254
ENSCVAG00000004222	-	63	37.129	ENSCVAG00000004508	-	68	36.869
ENSCVAG00000004222	-	51	32.095	ENSCVAG00000004368	-	72	32.095
ENSCVAG00000004222	-	64	33.028	ENSCVAG00000012180	-	90	39.130
ENSCVAG00000004222	-	53	30.855	ENSCVAG00000003428	-	96	36.517
ENSCVAG00000004222	-	52	40.690	ENSCVAG00000001369	-	73	40.690
ENSCVAG00000004222	-	51	40.299	ENSCVAG00000011213	-	95	40.964
ENSCVAG00000004222	-	52	41.964	ENSCVAG00000010160	-	80	31.198
ENSCVAG00000004222	-	64	39.552	ENSCVAG00000013337	-	83	44.643
ENSCVAG00000004222	-	51	35.570	ENSCVAG00000009981	-	84	39.669
ENSCVAG00000004222	-	51	40.000	ENSCVAG00000003396	-	59	40.000
ENSCVAG00000004222	-	52	43.671	ENSCVAG00000016796	-	84	43.671
ENSCVAG00000004222	-	56	32.362	ENSCVAG00000003512	-	92	38.974
ENSCVAG00000004222	-	51	34.364	ENSCVAG00000001767	-	77	36.810
ENSCVAG00000004222	-	52	31.988	ENSCVAG00000013692	prdm5	70	31.988
ENSCVAG00000004222	-	51	38.547	ENSCVAG00000011334	-	80	38.547
ENSCVAG00000004222	-	54	34.659	ENSCVAG00000019519	-	72	34.659
ENSCVAG00000004222	-	51	36.744	ENSCVAG00000015153	-	71	33.922
ENSCVAG00000004222	-	64	43.846	ENSCVAG00000006491	-	68	43.846
ENSCVAG00000004222	-	64	36.449	ENSCVAG00000020414	-	50	38.000
ENSCVAG00000004222	-	51	40.462	ENSCVAG00000014734	-	90	43.919
ENSCVAG00000004222	-	69	46.429	ENSCVAG00000020119	-	78	46.429
ENSCVAG00000004222	-	52	40.000	ENSCVAG00000008952	-	95	40.000
ENSCVAG00000004222	-	59	31.200	ENSCVAG00000012302	-	91	40.909
ENSCVAG00000004222	-	54	37.441	ENSCVAG00000007073	-	73	31.399
ENSCVAG00000004222	-	54	32.143	ENSCVAG00000018507	-	72	30.175
ENSCVAG00000004222	-	51	38.835	ENSCVAG00000004382	-	87	38.835
ENSCVAG00000004222	-	52	30.653	ENSCVAG00000000351	-	62	33.333
ENSCVAG00000004222	-	63	41.111	ENSCVAG00000022991	-	91	42.373
ENSCVAG00000004222	-	52	43.925	ENSCVAG00000003250	-	66	43.925
ENSCVAG00000004222	-	65	38.028	ENSCVAG00000012248	-	91	38.028
ENSCVAG00000004222	-	54	40.559	ENSCVAG00000020155	-	81	40.559
ENSCVAG00000004222	-	50	35.882	ENSCVAG00000008836	-	64	41.176
ENSCVAG00000004222	-	53	44.538	ENSCVAG00000013382	-	80	44.538
ENSCVAG00000004222	-	52	36.765	ENSCVAG00000004958	-	81	37.692
ENSCVAG00000004222	-	54	39.572	ENSCVAG00000016181	-	96	39.572
ENSCVAG00000004222	-	93	32.174	ENSCVAG00000016092	-	96	32.164
ENSCVAG00000004222	-	52	34.286	ENSCVAG00000016098	-	74	34.286
ENSCVAG00000004222	-	56	36.082	ENSCVAG00000011235	-	90	36.426
ENSCVAG00000004222	-	54	30.986	ENSCVAG00000009103	-	87	32.042
ENSCVAG00000004222	-	51	45.690	ENSCVAG00000001444	-	94	45.690
ENSCVAG00000004222	-	63	38.806	ENSCVAG00000002307	-	68	38.806
ENSCVAG00000004222	-	51	40.719	ENSCVAG00000011469	-	83	40.719
ENSCVAG00000004222	-	54	39.130	ENSCVAG00000019646	-	66	39.130
ENSCVAG00000004222	-	52	38.793	ENSCVAG00000014322	-	72	38.793
ENSCVAG00000004222	-	54	31.148	ENSCVAG00000007051	-	99	31.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004222	-	93	51.036	ENSATEG00000009436	-	97	50.957	Anabas_testudineus
ENSCVAG00000004222	-	55	35.583	ENSELUG00000009654	-	63	34.973	Esox_lucius
ENSCVAG00000004222	-	92	47.806	ENSHCOG00000002898	-	99	48.119	Hippocampus_comes
ENSCVAG00000004222	-	93	55.292	ENSKMAG00000011850	-	93	55.573	Kryptolebias_marmoratus
ENSCVAG00000004222	-	52	50.746	ENSONIG00000008984	-	82	50.888	Oreochromis_niloticus
ENSCVAG00000004222	-	53	36.585	ENSORLG00000016243	-	77	36.585	Oryzias_latipes
ENSCVAG00000004222	-	53	36.585	ENSORLG00015002548	-	77	36.585	Oryzias_latipes_hsok
ENSCVAG00000004222	-	51	37.013	ENSPFOG00000018462	-	87	37.748	Poecilia_formosa
ENSCVAG00000004222	-	53	48.810	ENSSFOG00015008577	-	93	45.882	Scleropages_formosus
ENSCVAG00000004222	-	94	50.580	ENSSMAG00000000056	-	97	50.803	Scophthalmus_maximus
ENSCVAG00000004222	-	93	47.368	ENSTRUG00000005880	-	95	47.173	Takifugu_rubripes
ENSCVAG00000004222	-	79	41.176	ENSXETG00000030249	-	92	41.176	Xenopus_tropicalis