EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000004277 (Gene tree)
Gene ID: -
Gene Symbol: tdrd12
Alias: si:ch1073-415n3.1
Full Name: tudor domain containing 12
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 64228 bases
Position: chrKL653399.1:245967-310194
Accession: ZDB-GENE-121214-348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003059	TUDOR	PF00567.24	1.9e-07	1	1
ENSCVAP00000003042	TUDOR	PF00567.24	5.3e-07	1	1
ENSCVAP00000003059	DEAD	PF00270.29	2e-06	1	1
ENSCVAP00000003042	DEAD	PF00270.29	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010696	-	2175	-	ENSCVAP00000003042	724 (aa)	-	-
ENSCVAT00000010671	-	2214	-	ENSCVAP00000003059	737 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000004277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004277	tdrd12	96	65.120	ENSAPOG00000006421	tdrd12	71	65.120	Acanthochromis_polyacanthus
ENSCVAG00000004277	tdrd12	87	44.172	ENSAMEG00000015440	-	92	38.254	Ailuropoda_melanoleuca
ENSCVAG00000004277	tdrd12	95	73.404	ENSACIG00000021652	tdrd12	69	65.544	Amphilophus_citrinellus
ENSCVAG00000004277	tdrd12	96	65.789	ENSAOCG00000016463	tdrd12	61	65.789	Amphiprion_ocellaris
ENSCVAG00000004277	tdrd12	96	73.563	ENSAPEG00000015105	tdrd12	71	66.317	Amphiprion_percula
ENSCVAG00000004277	tdrd12	96	65.667	ENSATEG00000011608	tdrd12	65	73.180	Anabas_testudineus
ENSCVAG00000004277	tdrd12	87	42.638	ENSAPLG00000011417	-	60	42.638	Anas_platyrhynchos
ENSCVAG00000004277	tdrd12	91	43.893	ENSACAG00000029615	-	78	43.893	Anolis_carolinensis
ENSCVAG00000004277	tdrd12	90	43.498	ENSANAG00000023166	-	57	43.498	Aotus_nancymaae
ENSCVAG00000004277	tdrd12	94	50.000	ENSAMXG00000013811	tdrd12	70	50.000	Astyanax_mexicanus
ENSCVAG00000004277	tdrd12	94	41.714	ENSCJAG00000000763	-	58	41.714	Callithrix_jacchus
ENSCVAG00000004277	tdrd12	93	44.526	ENSCAFG00000007505	TDRD12	56	44.526	Canis_familiaris
ENSCVAG00000004277	tdrd12	93	44.526	ENSCAFG00020019790	-	57	44.526	Canis_lupus_dingo
ENSCVAG00000004277	tdrd12	88	43.485	ENSTSYG00000012034	-	56	43.485	Carlito_syrichta
ENSCVAG00000004277	tdrd12	92	39.452	ENSCPOG00000002876	-	62	39.208	Cavia_porcellus
ENSCVAG00000004277	tdrd12	96	41.515	ENSCCAG00000037592	-	62	41.515	Cebus_capucinus
ENSCVAG00000004277	tdrd12	90	42.751	ENSCATG00000038627	-	59	42.751	Cercocebus_atys
ENSCVAG00000004277	tdrd12	91	46.183	ENSCLAG00000012138	-	57	46.183	Chinchilla_lanigera
ENSCVAG00000004277	tdrd12	90	42.815	ENSCSAG00000004794	-	57	42.815	Chlorocebus_sabaeus
ENSCVAG00000004277	tdrd12	90	45.703	ENSCPBG00000000147	-	63	45.703	Chrysemys_picta_bellii
ENSCVAG00000004277	tdrd12	90	40.807	ENSCANG00000040785	-	56	40.807	Colobus_angolensis_palliatus
ENSCVAG00000004277	tdrd12	90	39.448	ENSCGRG00001021407	-	59	39.448	Cricetulus_griseus_chok1gshd
ENSCVAG00000004277	tdrd12	90	37.756	ENSCGRG00000007286	-	60	37.295	Cricetulus_griseus_crigri
ENSCVAG00000004277	tdrd12	91	59.138	ENSCSEG00000001744	-	54	59.138	Cynoglossus_semilaevis
ENSCVAG00000004277	tdrd12	95	51.007	ENSDARG00000075217	tdrd12	62	50.943	Danio_rerio
ENSCVAG00000004277	tdrd12	90	47.656	ENSDNOG00000017244	-	56	47.656	Dasypus_novemcinctus
ENSCVAG00000004277	tdrd12	95	37.288	ENSDORG00000012134	-	64	37.288	Dipodomys_ordii
ENSCVAG00000004277	tdrd12	63	41.090	ENSETEG00000015088	-	52	41.090	Echinops_telfairi
ENSCVAG00000004277	tdrd12	93	39.051	ENSEASG00005021053	-	58	37.397	Equus_asinus_asinus
ENSCVAG00000004277	tdrd12	90	42.942	ENSEEUG00000008457	-	61	43.175	Erinaceus_europaeus
ENSCVAG00000004277	tdrd12	94	58.935	ENSELUG00000017494	tdrd12	81	51.111	Esox_lucius
ENSCVAG00000004277	tdrd12	91	39.394	ENSFALG00000000259	-	62	39.394	Ficedula_albicollis
ENSCVAG00000004277	tdrd12	92	39.160	ENSFDAG00000014797	-	62	39.160	Fukomys_damarensis
ENSCVAG00000004277	tdrd12	95	32.522	ENSGALG00000004704	-	70	32.522	Gallus_gallus
ENSCVAG00000004277	tdrd12	99	78.571	ENSGAFG00000003729	tdrd12	57	78.571	Gambusia_affinis
ENSCVAG00000004277	tdrd12	90	46.457	ENSGAGG00000000247	-	59	46.457	Gopherus_agassizii
ENSCVAG00000004277	tdrd12	96	40.890	ENSGGOG00000011938	-	62	40.890	Gorilla_gorilla
ENSCVAG00000004277	tdrd12	95	64.857	ENSHBUG00000020426	tdrd12	71	64.857	Haplochromis_burtoni
ENSCVAG00000004277	tdrd12	92	38.995	ENSHGLG00000015608	-	63	38.995	Heterocephalus_glaber_female
ENSCVAG00000004277	tdrd12	89	42.815	ENSHGLG00100008227	-	61	42.815	Heterocephalus_glaber_male
ENSCVAG00000004277	tdrd12	94	52.221	ENSIPUG00000016825	tdrd12	53	52.221	Ictalurus_punctatus
ENSCVAG00000004277	tdrd12	91	40.274	ENSSTOG00000013638	-	61	40.274	Ictidomys_tridecemlineatus
ENSCVAG00000004277	tdrd12	94	60.955	ENSKMAG00000008031	tdrd12	83	60.955	Kryptolebias_marmoratus
ENSCVAG00000004277	tdrd12	96	67.500	ENSLBEG00000005601	tdrd12	62	72.414	Labrus_bergylta
ENSCVAG00000004277	tdrd12	90	43.294	ENSLACG00000010650	-	61	43.294	Latimeria_chalumnae
ENSCVAG00000004277	tdrd12	94	52.569	ENSLOCG00000001690	tdrd12	52	52.569	Lepisosteus_oculatus
ENSCVAG00000004277	tdrd12	90	43.888	ENSLAFG00000008698	-	61	43.888	Loxodonta_africana
ENSCVAG00000004277	tdrd12	90	42.519	ENSMFAG00000044756	-	57	42.519	Macaca_fascicularis
ENSCVAG00000004277	tdrd12	92	45.985	ENSMMUG00000015608	-	58	42.519	Macaca_mulatta
ENSCVAG00000004277	tdrd12	90	42.519	ENSMNEG00000043067	-	58	42.519	Macaca_nemestrina
ENSCVAG00000004277	tdrd12	90	35.451	ENSMLEG00000042036	-	58	35.588	Mandrillus_leucophaeus
ENSCVAG00000004277	tdrd12	94	62.594	ENSMAMG00000013867	tdrd12	67	62.594	Mastacembelus_armatus
ENSCVAG00000004277	tdrd12	95	64.618	ENSMZEG00005024214	tdrd12	71	64.618	Maylandia_zebra
ENSCVAG00000004277	tdrd12	87	40.678	ENSMGAG00000005627	-	94	40.678	Meleagris_gallopavo
ENSCVAG00000004277	tdrd12	91	39.232	ENSMAUG00000013767	-	60	39.232	Mesocricetus_auratus
ENSCVAG00000004277	tdrd12	93	42.569	ENSMICG00000003623	-	60	42.569	Microcebus_murinus
ENSCVAG00000004277	tdrd12	88	42.470	ENSMOCG00000002366	-	61	42.470	Microtus_ochrogaster
ENSCVAG00000004277	tdrd12	97	67.442	ENSMMOG00000018662	tdrd12	68	67.500	Mola_mola
ENSCVAG00000004277	tdrd12	94	42.105	ENSMODG00000012286	-	59	42.105	Monodelphis_domestica
ENSCVAG00000004277	tdrd12	89	64.024	ENSMALG00000006918	tdrd12	59	64.024	Monopterus_albus
ENSCVAG00000004277	tdrd12	96	38.789	MGP_CAROLIEiJ_G0029587	-	61	42.857	Mus_caroli
ENSCVAG00000004277	tdrd12	96	39.153	MGP_PahariEiJ_G0012821	-	61	43.086	Mus_pahari
ENSCVAG00000004277	tdrd12	96	38.560	MGP_SPRETEiJ_G0030686	-	61	42.711	Mus_spretus
ENSCVAG00000004277	tdrd12	93	44.161	ENSMPUG00000007791	-	57	44.161	Mustela_putorius_furo
ENSCVAG00000004277	tdrd12	80	45.756	ENSMLUG00000010694	-	58	45.756	Myotis_lucifugus
ENSCVAG00000004277	tdrd12	91	38.661	ENSNGAG00000000793	-	61	38.661	Nannospalax_galili
ENSCVAG00000004277	tdrd12	89	64.625	ENSNBRG00000017878	-	92	64.625	Neolamprologus_brichardi
ENSCVAG00000004277	tdrd12	93	40.313	ENSNLEG00000007635	-	61	40.313	Nomascus_leucogenys
ENSCVAG00000004277	tdrd12	81	47.989	ENSOPRG00000015809	-	54	47.989	Ochotona_princeps
ENSCVAG00000004277	tdrd12	92	39.525	ENSODEG00000014443	-	61	39.525	Octodon_degus
ENSCVAG00000004277	tdrd12	94	63.203	ENSONIG00000010630	tdrd12	64	63.203	Oreochromis_niloticus
ENSCVAG00000004277	tdrd12	66	54.412	ENSOANG00000029707	-	82	54.412	Ornithorhynchus_anatinus
ENSCVAG00000004277	tdrd12	99	38.403	ENSOCUG00000016911	-	65	38.530	Oryctolagus_cuniculus
ENSCVAG00000004277	tdrd12	99	55.513	ENSORLG00000027859	tdrd12	69	55.513	Oryzias_latipes
ENSCVAG00000004277	tdrd12	95	63.441	ENSORLG00015020835	tdrd12	52	63.441	Oryzias_latipes_hsok
ENSCVAG00000004277	tdrd12	89	59.202	ENSOMEG00000021862	tdrd12	63	59.202	Oryzias_melastigma
ENSCVAG00000004277	tdrd12	90	43.769	ENSOGAG00000001571	-	61	43.769	Otolemur_garnettii
ENSCVAG00000004277	tdrd12	93	45.255	ENSOARG00000004254	-	58	45.255	Ovis_aries
ENSCVAG00000004277	tdrd12	96	40.890	ENSPPAG00000042284	-	61	40.890	Pan_paniscus
ENSCVAG00000004277	tdrd12	94	41.713	ENSPPRG00000002389	-	62	41.713	Panthera_pardus
ENSCVAG00000004277	tdrd12	96	41.446	ENSPTRG00000010795	TDRD12	63	41.446	Pan_troglodytes
ENSCVAG00000004277	tdrd12	89	45.620	ENSPANG00000001203	-	57	42.519	Papio_anubis
ENSCVAG00000004277	tdrd12	95	50.562	ENSPKIG00000006407	tdrd12	52	53.333	Paramormyrops_kingsleyae
ENSCVAG00000004277	tdrd12	76	41.923	ENSPSIG00000012970	-	56	41.923	Pelodiscus_sinensis
ENSCVAG00000004277	tdrd12	94	60.031	ENSPMGG00000022691	tdrd12	71	59.877	Periophthalmus_magnuspinnatus
ENSCVAG00000004277	tdrd12	94	42.857	ENSPEMG00000009233	-	62	42.857	Peromyscus_maniculatus_bairdii
ENSCVAG00000004277	tdrd12	94	41.447	ENSPCIG00000020993	-	61	41.447	Phascolarctos_cinereus
ENSCVAG00000004277	tdrd12	95	82.222	ENSPFOG00000008184	tdrd12	53	82.222	Poecilia_formosa
ENSCVAG00000004277	tdrd12	63	74.347	ENSPMEG00000006420	tdrd12	60	74.347	Poecilia_mexicana
ENSCVAG00000004277	tdrd12	91	69.208	ENSPREG00000004916	tdrd12	53	78.030	Poecilia_reticulata
ENSCVAG00000004277	tdrd12	96	41.168	ENSPPYG00000009821	-	60	41.168	Pongo_abelii
ENSCVAG00000004277	tdrd12	88	42.922	ENSPCOG00000023600	-	57	42.922	Propithecus_coquereli
ENSCVAG00000004277	tdrd12	95	64.555	ENSPNYG00000022866	tdrd12	69	64.555	Pundamilia_nyererei
ENSCVAG00000004277	tdrd12	94	51.515	ENSPNAG00000003413	tdrd12	69	50.147	Pygocentrus_nattereri
ENSCVAG00000004277	tdrd12	93	44.526	ENSRNOG00000012719	Tdrd12	57	44.526	Rattus_norvegicus
ENSCVAG00000004277	tdrd12	90	41.679	ENSRBIG00000019899	-	61	41.679	Rhinopithecus_bieti
ENSCVAG00000004277	tdrd12	90	42.519	ENSRROG00000036351	-	57	42.519	Rhinopithecus_roxellana
ENSCVAG00000004277	tdrd12	90	43.134	ENSSBOG00000034916	-	57	43.134	Saimiri_boliviensis_boliviensis
ENSCVAG00000004277	tdrd12	91	41.630	ENSSHAG00000002599	-	62	41.630	Sarcophilus_harrisii
ENSCVAG00000004277	tdrd12	83	48.130	ENSSFOG00015000297	tdrd12	57	47.967	Scleropages_formosus
ENSCVAG00000004277	tdrd12	99	67.730	ENSSMAG00000002870	tdrd12	71	67.730	Scophthalmus_maximus
ENSCVAG00000004277	tdrd12	96	71.795	ENSSDUG00000017304	tdrd12	71	64.468	Seriola_dumerili
ENSCVAG00000004277	tdrd12	96	64.468	ENSSLDG00000004415	tdrd12	73	64.468	Seriola_lalandi_dorsalis
ENSCVAG00000004277	tdrd12	73	43.091	ENSSARG00000005357	-	50	43.091	Sorex_araneus
ENSCVAG00000004277	tdrd12	89	43.284	ENSSPUG00000013174	-	64	43.284	Sphenodon_punctatus
ENSCVAG00000004277	tdrd12	96	79.310	ENSSPAG00000005706	tdrd12	70	79.310	Stegastes_partitus
ENSCVAG00000004277	tdrd12	92	41.983	ENSSSCG00000002857	-	67	42.044	Sus_scrofa
ENSCVAG00000004277	tdrd12	87	37.994	ENSTGUG00000009121	-	99	37.994	Taeniopygia_guttata
ENSCVAG00000004277	tdrd12	99	53.546	ENSTRUG00000021888	tdrd12	77	53.546	Takifugu_rubripes
ENSCVAG00000004277	tdrd12	82	45.085	ENSTBEG00000007609	-	56	45.085	Tupaia_belangeri
ENSCVAG00000004277	tdrd12	89	43.134	ENSTTRG00000012206	-	61	43.134	Tursiops_truncatus
ENSCVAG00000004277	tdrd12	90	43.091	ENSUAMG00000007298	-	57	43.091	Ursus_americanus
ENSCVAG00000004277	tdrd12	90	42.942	ENSUMAG00000014314	-	57	42.942	Ursus_maritimus
ENSCVAG00000004277	tdrd12	84	39.075	ENSVPAG00000012051	-	60	39.075	Vicugna_pacos
ENSCVAG00000004277	tdrd12	93	44.891	ENSVVUG00000016637	-	58	44.891	Vulpes_vulpes
ENSCVAG00000004277	tdrd12	93	34.788	ENSXETG00000031945	-	86	34.259	Xenopus_tropicalis
ENSCVAG00000004277	tdrd12	95	71.795	ENSXMAG00000020908	tdrd12	73	71.795	Xiphophorus_maculatus