EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000004364 (Gene tree)
Gene ID: 107097255
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1854 bases
Position: chrKL653181.1:50796-52649
Accession: 107097255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021985	Glu-tRNAGln	PF02686.15	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010435	-	997	XM_015394334	ENSCVAP00000021985	189 (aa)	XP_015249820	UPI0007428952

Gene Model

Click here to download ENSCVAG00000004364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004364	gatc	53	63.000	ENSG00000257218	GATC	100	72.340	Homo_sapiens
ENSCVAG00000004364	gatc	53	61.000	ENSAMEG00000013298	-	74	61.000	Ailuropoda_melanoleuca
ENSCVAG00000004364	gatc	51	84.375	ENSACIG00000016853	gatc	69	84.375	Amphilophus_citrinellus
ENSCVAG00000004364	gatc	66	87.200	ENSAOCG00000014641	gatc	100	87.200	Amphiprion_ocellaris
ENSCVAG00000004364	gatc	99	68.750	ENSAPEG00000023411	gatc	98	68.750	Amphiprion_percula
ENSCVAG00000004364	gatc	50	90.526	ENSATEG00000009237	gatc	79	90.526	Anabas_testudineus
ENSCVAG00000004364	gatc	53	73.000	ENSACAG00000002868	-	74	73.000	Anolis_carolinensis
ENSCVAG00000004364	gatc	53	64.000	ENSANAG00000034389	-	74	64.000	Aotus_nancymaae
ENSCVAG00000004364	gatc	100	66.316	ENSACLG00000026251	gatc	99	66.316	Astatotilapia_calliptera
ENSCVAG00000004364	gatc	70	81.818	ENSAMXG00000004252	gatc	64	74.675	Astyanax_mexicanus
ENSCVAG00000004364	gatc	53	60.000	ENSBTAG00000012791	GATC	74	60.000	Bos_taurus
ENSCVAG00000004364	gatc	62	37.607	WBGene00013433	Y66D12A.7	67	37.607	Caenorhabditis_elegans
ENSCVAG00000004364	gatc	53	64.000	ENSCJAG00000001183	-	55	64.000	Callithrix_jacchus
ENSCVAG00000004364	gatc	53	62.000	ENSCAFG00000010311	-	74	62.000	Canis_familiaris
ENSCVAG00000004364	gatc	53	62.000	ENSCAFG00020020606	-	74	62.000	Canis_lupus_dingo
ENSCVAG00000004364	gatc	56	57.547	ENSCHIG00000019423	-	78	57.547	Capra_hircus
ENSCVAG00000004364	gatc	53	63.000	ENSTSYG00000006845	-	74	63.000	Carlito_syrichta
ENSCVAG00000004364	gatc	53	64.000	ENSCCAG00000022235	-	74	64.000	Cebus_capucinus
ENSCVAG00000004364	gatc	53	63.000	ENSCATG00000038807	GATC	74	63.000	Cercocebus_atys
ENSCVAG00000004364	gatc	51	64.583	ENSCLAG00000011015	-	60	64.583	Chinchilla_lanigera
ENSCVAG00000004364	gatc	53	64.000	ENSCSAG00000002259	GATC	74	64.000	Chlorocebus_sabaeus
ENSCVAG00000004364	gatc	53	63.000	ENSCHOG00000009235	-	74	63.000	Choloepus_hoffmanni
ENSCVAG00000004364	gatc	68	64.341	ENSCPBG00000011342	-	68	64.341	Chrysemys_picta_bellii
ENSCVAG00000004364	gatc	53	62.376	ENSCANG00000031071	GATC	74	62.376	Colobus_angolensis_palliatus
ENSCVAG00000004364	gatc	50	63.158	ENSCGRG00001019220	-	61	63.158	Cricetulus_griseus_chok1gshd
ENSCVAG00000004364	gatc	50	63.158	ENSCGRG00000004184	-	61	63.158	Cricetulus_griseus_crigri
ENSCVAG00000004364	gatc	99	65.241	ENSCSEG00000007798	gatc	92	65.241	Cynoglossus_semilaevis
ENSCVAG00000004364	gatc	100	54.497	ENSCSEG00000016618	-	99	54.497	Cynoglossus_semilaevis
ENSCVAG00000004364	gatc	100	61.905	ENSDARG00000056855	gatc	100	61.905	Danio_rerio
ENSCVAG00000004364	gatc	56	57.265	ENSDNOG00000012593	-	65	56.481	Dasypus_novemcinctus
ENSCVAG00000004364	gatc	65	42.623	FBgn0064115	GatC	82	42.623	Drosophila_melanogaster
ENSCVAG00000004364	gatc	52	53.535	ENSETEG00000002604	-	73	53.535	Echinops_telfairi
ENSCVAG00000004364	gatc	50	49.474	ENSEBUG00000008772	gatc	60	45.946	Eptatretus_burgeri
ENSCVAG00000004364	gatc	53	64.000	ENSECAG00000011118	-	74	64.000	Equus_caballus
ENSCVAG00000004364	gatc	63	49.600	ENSEEUG00000011638	-	93	49.600	Erinaceus_europaeus
ENSCVAG00000004364	gatc	76	66.443	ENSELUG00000012608	gatc	96	67.164	Esox_lucius
ENSCVAG00000004364	gatc	53	61.000	ENSFCAG00000038718	-	74	61.000	Felis_catus
ENSCVAG00000004364	gatc	71	56.296	ENSFALG00000007564	-	84	56.296	Ficedula_albicollis
ENSCVAG00000004364	gatc	56	65.094	ENSFDAG00000018720	-	77	65.094	Fukomys_damarensis
ENSCVAG00000004364	gatc	100	84.127	ENSFHEG00000014992	GATC	100	84.127	Fundulus_heteroclitus
ENSCVAG00000004364	gatc	80	69.737	ENSGMOG00000008742	gatc	94	69.737	Gadus_morhua
ENSCVAG00000004364	gatc	56	62.264	ENSGALG00000007195	-	80	60.714	Gallus_gallus
ENSCVAG00000004364	gatc	70	86.364	ENSGAFG00000012801	gatc	82	86.364	Gambusia_affinis
ENSCVAG00000004364	gatc	100	67.708	ENSGACG00000008973	gatc	99	67.708	Gasterosteus_aculeatus
ENSCVAG00000004364	gatc	68	65.116	ENSGAGG00000016018	-	70	65.116	Gopherus_agassizii
ENSCVAG00000004364	gatc	100	65.789	ENSHBUG00000006827	gatc	99	65.789	Haplochromis_burtoni
ENSCVAG00000004364	gatc	57	62.617	ENSHGLG00000011394	GATC	78	62.617	Heterocephalus_glaber_female
ENSCVAG00000004364	gatc	57	60.748	ENSHGLG00100018850	-	77	60.748	Heterocephalus_glaber_male
ENSCVAG00000004364	gatc	68	78.906	ENSHCOG00000009209	gatc	100	78.906	Hippocampus_comes
ENSCVAG00000004364	gatc	68	81.395	ENSIPUG00000023072	gatc	66	77.305	Ictalurus_punctatus
ENSCVAG00000004364	gatc	53	63.000	ENSSTOG00000025740	-	65	63.000	Ictidomys_tridecemlineatus
ENSCVAG00000004364	gatc	51	63.542	ENSJJAG00000000369	Gatc	61	63.542	Jaculus_jaculus
ENSCVAG00000004364	gatc	69	80.769	ENSKMAG00000016476	gatc	100	80.769	Kryptolebias_marmoratus
ENSCVAG00000004364	gatc	89	69.822	ENSLBEG00000007603	gatc	88	69.822	Labrus_bergylta
ENSCVAG00000004364	gatc	89	51.462	ENSLACG00000018239	-	87	51.462	Latimeria_chalumnae
ENSCVAG00000004364	gatc	68	74.419	ENSLOCG00000004056	gatc	70	74.419	Lepisosteus_oculatus
ENSCVAG00000004364	gatc	71	52.206	ENSLAFG00000006384	-	83	52.206	Loxodonta_africana
ENSCVAG00000004364	gatc	53	63.000	ENSMFAG00000034197	GATC	74	63.000	Macaca_fascicularis
ENSCVAG00000004364	gatc	53	63.000	ENSMMUG00000046665	GATC	74	63.000	Macaca_mulatta
ENSCVAG00000004364	gatc	53	63.000	ENSMNEG00000034653	GATC	74	63.000	Macaca_nemestrina
ENSCVAG00000004364	gatc	53	64.000	ENSMLEG00000039862	GATC	74	64.000	Mandrillus_leucophaeus
ENSCVAG00000004364	gatc	99	70.745	ENSMAMG00000015851	gatc	98	70.745	Mastacembelus_armatus
ENSCVAG00000004364	gatc	100	66.316	ENSMZEG00005016072	gatc	99	66.316	Maylandia_zebra
ENSCVAG00000004364	gatc	56	64.151	ENSMGAG00000008733	-	100	64.151	Meleagris_gallopavo
ENSCVAG00000004364	gatc	50	64.211	ENSMAUG00000012756	Gatc	61	64.211	Mesocricetus_auratus
ENSCVAG00000004364	gatc	53	64.000	ENSMICG00000008669	-	74	64.000	Microcebus_murinus
ENSCVAG00000004364	gatc	50	63.158	ENSMOCG00000005051	Gatc	61	63.158	Microtus_ochrogaster
ENSCVAG00000004364	gatc	61	81.197	ENSMMOG00000017695	gatc	92	82.727	Mola_mola
ENSCVAG00000004364	gatc	67	55.556	ENSMODG00000003152	-	88	55.556	Monodelphis_domestica
ENSCVAG00000004364	gatc	68	52.985	MGP_PahariEiJ_G0024203	Gatc	84	52.985	Mus_pahari
ENSCVAG00000004364	gatc	53	62.000	ENSMPUG00000003183	-	74	62.000	Mustela_putorius_furo
ENSCVAG00000004364	gatc	50	62.105	ENSMLUG00000010341	-	94	62.105	Myotis_lucifugus
ENSCVAG00000004364	gatc	100	66.316	ENSNBRG00000007810	gatc	99	66.316	Neolamprologus_brichardi
ENSCVAG00000004364	gatc	56	60.952	ENSNLEG00000015651	GATC	77	60.952	Nomascus_leucogenys
ENSCVAG00000004364	gatc	55	60.577	ENSMEUG00000004064	-	84	60.577	Notamacropus_eugenii
ENSCVAG00000004364	gatc	53	63.366	ENSOPRG00000004226	-	74	63.366	Ochotona_princeps
ENSCVAG00000004364	gatc	68	80.916	ENSONIG00000013444	gatc	90	80.916	Oreochromis_niloticus
ENSCVAG00000004364	gatc	53	64.000	ENSOCUG00000009867	-	74	64.000	Oryctolagus_cuniculus
ENSCVAG00000004364	gatc	64	80.992	ENSORLG00000007156	gatc	100	80.992	Oryzias_latipes
ENSCVAG00000004364	gatc	94	68.362	ENSORLG00020014991	gatc	93	68.362	Oryzias_latipes_hni
ENSCVAG00000004364	gatc	94	67.797	ENSORLG00015003450	gatc	93	67.797	Oryzias_latipes_hsok
ENSCVAG00000004364	gatc	76	76.224	ENSOMEG00000002280	gatc	76	76.224	Oryzias_melastigma
ENSCVAG00000004364	gatc	56	60.952	ENSOGAG00000003850	-	96	60.952	Otolemur_garnettii
ENSCVAG00000004364	gatc	58	55.652	ENSOARG00000012338	-	89	55.652	Ovis_aries
ENSCVAG00000004364	gatc	53	63.000	ENSPPAG00000029164	GATC	74	63.000	Pan_paniscus
ENSCVAG00000004364	gatc	53	61.000	ENSPPRG00000000929	-	74	61.000	Panthera_pardus
ENSCVAG00000004364	gatc	53	61.000	ENSPTIG00000009889	-	74	61.000	Panthera_tigris_altaica
ENSCVAG00000004364	gatc	53	63.000	ENSPTRG00000049887	GATC	74	63.000	Pan_troglodytes
ENSCVAG00000004364	gatc	53	62.000	ENSPANG00000033975	GATC	74	62.000	Papio_anubis
ENSCVAG00000004364	gatc	72	70.588	ENSPKIG00000024856	gatc	70	70.588	Paramormyrops_kingsleyae
ENSCVAG00000004364	gatc	61	66.379	ENSPSIG00000011112	-	99	66.379	Pelodiscus_sinensis
ENSCVAG00000004364	gatc	67	84.127	ENSPMGG00000018829	gatc	80	84.127	Periophthalmus_magnuspinnatus
ENSCVAG00000004364	gatc	50	65.957	ENSPEMG00000000665	Gatc	61	65.957	Peromyscus_maniculatus_bairdii
ENSCVAG00000004364	gatc	100	82.540	ENSPFOG00000011603	gatc	100	82.540	Poecilia_formosa
ENSCVAG00000004364	gatc	100	82.011	ENSPLAG00000002471	gatc	100	82.011	Poecilia_latipinna
ENSCVAG00000004364	gatc	100	82.011	ENSPMEG00000020958	gatc	100	82.011	Poecilia_mexicana
ENSCVAG00000004364	gatc	59	96.396	ENSPREG00000022256	gatc	75	96.396	Poecilia_reticulata
ENSCVAG00000004364	gatc	57	61.682	ENSPPYG00000005030	GATC	78	61.682	Pongo_abelii
ENSCVAG00000004364	gatc	62	55.085	ENSPCAG00000013864	-	87	55.085	Procavia_capensis
ENSCVAG00000004364	gatc	51	65.625	ENSPVAG00000002228	-	71	65.625	Pteropus_vampyrus
ENSCVAG00000004364	gatc	100	65.789	ENSPNYG00000016015	gatc	99	65.789	Pundamilia_nyererei
ENSCVAG00000004364	gatc	68	78.295	ENSPNAG00000001239	gatc	72	65.269	Pygocentrus_nattereri
ENSCVAG00000004364	gatc	50	65.263	ENSRNOG00000001161	Gatc	61	65.263	Rattus_norvegicus
ENSCVAG00000004364	gatc	53	64.000	ENSRBIG00000033363	GATC	74	64.000	Rhinopithecus_bieti
ENSCVAG00000004364	gatc	53	64.000	ENSRROG00000042802	GATC	74	64.000	Rhinopithecus_roxellana
ENSCVAG00000004364	gatc	53	62.000	ENSSBOG00000033750	-	74	62.000	Saimiri_boliviensis_boliviensis
ENSCVAG00000004364	gatc	53	63.000	ENSSHAG00000005745	-	94	63.000	Sarcophilus_harrisii
ENSCVAG00000004364	gatc	59	80.180	ENSSFOG00015002508	gatc	70	79.091	Scleropages_formosus
ENSCVAG00000004364	gatc	98	72.043	ENSSMAG00000014280	gatc	97	72.043	Scophthalmus_maximus
ENSCVAG00000004364	gatc	99	70.769	ENSSDUG00000012206	gatc	100	70.769	Seriola_dumerili
ENSCVAG00000004364	gatc	100	69.948	ENSSLDG00000025159	gatc	97	69.948	Seriola_lalandi_dorsalis
ENSCVAG00000004364	gatc	63	58.824	ENSSPUG00000015693	-	72	65.657	Sphenodon_punctatus
ENSCVAG00000004364	gatc	98	68.394	ENSSPAG00000011860	gatc	100	68.394	Stegastes_partitus
ENSCVAG00000004364	gatc	50	65.263	ENSSSCG00000032747	-	69	65.263	Sus_scrofa
ENSCVAG00000004364	gatc	57	67.290	ENSTGUG00000009561	-	99	67.290	Taeniopygia_guttata
ENSCVAG00000004364	gatc	72	81.022	ENSTRUG00000021596	gatc	85	71.598	Takifugu_rubripes
ENSCVAG00000004364	gatc	77	75.342	ENSTNIG00000015879	gatc	71	75.342	Tetraodon_nigroviridis
ENSCVAG00000004364	gatc	53	63.000	ENSTTRG00000000144	GATC	74	63.000	Tursiops_truncatus
ENSCVAG00000004364	gatc	53	62.000	ENSUAMG00000015523	-	74	62.000	Ursus_americanus
ENSCVAG00000004364	gatc	53	62.000	ENSVVUG00000021055	-	74	62.000	Vulpes_vulpes
ENSCVAG00000004364	gatc	59	96.396	ENSXCOG00000017087	gatc	81	96.396	Xiphophorus_couchianus
ENSCVAG00000004364	gatc	100	80.952	ENSXMAG00000018267	gatc	100	80.952	Xiphophorus_maculatus