EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004476 (Gene tree)
Gene ID: 107104841
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10450 bases
Position: chrKL654413.1:25519-35968
Accession: 107104841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003290	RRM_1	PF00076.22	1e-27	1	2
ENSCVAP00000003290	RRM_1	PF00076.22	1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010282	-	1125	XM_015404960	ENSCVAP00000003290	374 (aa)	XP_015260446	-

Gene Model

Click here to download ENSCVAG00000004476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004476	grsf1	77	43.519	ENSCVAG00000014097	hnrnph1	80	43.077
ENSCVAG00000004476	grsf1	77	58.442	ENSCVAG00000010461	HNRNPH3	91	43.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004476	grsf1	100	62.626	ENSAPOG00000012487	grsf1	99	62.626	Acanthochromis_polyacanthus
ENSCVAG00000004476	grsf1	100	66.754	ENSACIG00000005871	grsf1	99	67.277	Amphilophus_citrinellus
ENSCVAG00000004476	grsf1	100	62.469	ENSAOCG00000017462	-	99	62.469	Amphiprion_ocellaris
ENSCVAG00000004476	grsf1	100	62.563	ENSAPEG00000007240	-	99	62.563	Amphiprion_percula
ENSCVAG00000004476	grsf1	100	60.969	ENSATEG00000007185	grsf1	100	60.969	Anabas_testudineus
ENSCVAG00000004476	grsf1	100	63.524	ENSACLG00000003685	-	99	63.524	Astatotilapia_calliptera
ENSCVAG00000004476	grsf1	86	48.297	ENSAMXG00000012270	grsf1	98	50.000	Astyanax_mexicanus
ENSCVAG00000004476	grsf1	99	58.589	ENSCSEG00000019209	-	95	58.589	Cynoglossus_semilaevis
ENSCVAG00000004476	grsf1	87	51.829	ENSDARG00000053021	grsf1	79	51.829	Danio_rerio
ENSCVAG00000004476	grsf1	100	56.079	ENSFHEG00000013358	-	99	56.824	Fundulus_heteroclitus
ENSCVAG00000004476	grsf1	77	53.156	ENSGMOG00000014047	grsf1	100	53.156	Gadus_morhua
ENSCVAG00000004476	grsf1	99	72.932	ENSGAFG00000004496	grsf1	99	72.932	Gambusia_affinis
ENSCVAG00000004476	grsf1	78	58.333	ENSGACG00000014447	grsf1	97	58.333	Gasterosteus_aculeatus
ENSCVAG00000004476	grsf1	100	63.682	ENSHBUG00000006284	grsf1	99	63.682	Haplochromis_burtoni
ENSCVAG00000004476	grsf1	99	56.203	ENSHCOG00000007715	-	99	56.203	Hippocampus_comes
ENSCVAG00000004476	grsf1	98	49.206	ENSIPUG00000010533	grsf1	94	49.206	Ictalurus_punctatus
ENSCVAG00000004476	grsf1	100	59.145	ENSKMAG00000004528	grsf1	100	60.095	Kryptolebias_marmoratus
ENSCVAG00000004476	grsf1	78	55.519	ENSLBEG00000018100	grsf1	98	55.519	Labrus_bergylta
ENSCVAG00000004476	grsf1	99	60.750	ENSMAMG00000002627	grsf1	99	60.750	Mastacembelus_armatus
ENSCVAG00000004476	grsf1	100	63.524	ENSMZEG00005020633	-	99	63.524	Maylandia_zebra
ENSCVAG00000004476	grsf1	95	61.602	ENSMMOG00000014231	grsf1	99	61.497	Mola_mola
ENSCVAG00000004476	grsf1	99	59.553	ENSMALG00000000251	grsf1	99	59.553	Monopterus_albus
ENSCVAG00000004476	grsf1	99	62.563	ENSNBRG00000017774	grsf1	96	62.563	Neolamprologus_brichardi
ENSCVAG00000004476	grsf1	100	64.677	ENSONIG00000014119	grsf1	89	75.000	Oreochromis_niloticus
ENSCVAG00000004476	grsf1	88	65.318	ENSORLG00000030211	grsf1	89	65.318	Oryzias_latipes
ENSCVAG00000004476	grsf1	88	65.789	ENSORLG00020014383	grsf1	89	66.082	Oryzias_latipes_hni
ENSCVAG00000004476	grsf1	88	65.029	ENSORLG00015006520	grsf1	90	64.740	Oryzias_latipes_hsok
ENSCVAG00000004476	grsf1	90	63.889	ENSOMEG00000009181	grsf1	91	65.318	Oryzias_melastigma
ENSCVAG00000004476	grsf1	87	54.227	ENSPKIG00000019432	grsf1	83	54.227	Paramormyrops_kingsleyae
ENSCVAG00000004476	grsf1	84	61.877	ENSPMGG00000013654	grsf1	93	61.877	Periophthalmus_magnuspinnatus
ENSCVAG00000004476	grsf1	99	70.936	ENSPFOG00000006122	grsf1	99	71.429	Poecilia_formosa
ENSCVAG00000004476	grsf1	99	71.642	ENSPLAG00000020977	grsf1	99	72.139	Poecilia_latipinna
ENSCVAG00000004476	grsf1	99	71.429	ENSPMEG00000012485	grsf1	99	71.921	Poecilia_mexicana
ENSCVAG00000004476	grsf1	99	70.617	ENSPREG00000013383	grsf1	99	71.111	Poecilia_reticulata
ENSCVAG00000004476	grsf1	100	64.662	ENSPNYG00000005379	grsf1	99	64.662	Pundamilia_nyererei
ENSCVAG00000004476	grsf1	98	50.258	ENSPNAG00000014912	grsf1	97	50.258	Pygocentrus_nattereri
ENSCVAG00000004476	grsf1	88	46.087	ENSSFOG00015014620	grsf1	85	46.087	Scleropages_formosus
ENSCVAG00000004476	grsf1	86	60.961	ENSSMAG00000014181	grsf1	72	60.961	Scophthalmus_maximus
ENSCVAG00000004476	grsf1	100	63.708	ENSSDUG00000009397	-	96	69.831	Seriola_dumerili
ENSCVAG00000004476	grsf1	100	64.380	ENSSLDG00000025494	grsf1	99	64.380	Seriola_lalandi_dorsalis
ENSCVAG00000004476	grsf1	100	61.209	ENSSPAG00000023296	grsf1	99	61.209	Stegastes_partitus
ENSCVAG00000004476	grsf1	97	58.511	ENSTRUG00000015354	grsf1	100	58.247	Takifugu_rubripes
ENSCVAG00000004476	grsf1	81	59.804	ENSTNIG00000015350	-	99	59.804	Tetraodon_nigroviridis
ENSCVAG00000004476	grsf1	99	70.398	ENSXMAG00000029710	grsf1	100	70.398	Xiphophorus_maculatus