EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004508 (Gene tree)
Gene ID: 107092337
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 250-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3982 bases
Position: chrKL652876.1:47875-51856
Accession: 107092337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022073	zf-C2H2	PF00096.26	9.8e-27	1	6
ENSCVAP00000022073	zf-C2H2	PF00096.26	9.8e-27	2	6
ENSCVAP00000022073	zf-C2H2	PF00096.26	9.8e-27	3	6
ENSCVAP00000022073	zf-C2H2	PF00096.26	9.8e-27	4	6
ENSCVAP00000022073	zf-C2H2	PF00096.26	9.8e-27	5	6
ENSCVAP00000022073	zf-C2H2	PF00096.26	9.8e-27	6	6
ENSCVAP00000022073	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010205	-	1575	XM_015386744	ENSCVAP00000022073	388 (aa)	XP_015242230	UPI0007429DFA

Gene Model

Click here to download ENSCVAG00000004508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004508	-	84	40.367	ENSCVAG00000003417	-	59	40.367
ENSCVAG00000004508	-	85	40.404	ENSCVAG00000010160	-	93	43.277
ENSCVAG00000004508	-	75	45.000	ENSCVAG00000020119	-	80	45.000
ENSCVAG00000004508	-	62	62.791	ENSCVAG00000020938	-	96	62.791
ENSCVAG00000004508	-	93	43.182	ENSCVAG00000006667	-	92	43.182
ENSCVAG00000004508	-	99	43.902	ENSCVAG00000007073	-	93	43.902
ENSCVAG00000004508	-	99	40.244	ENSCVAG00000016924	-	100	40.244
ENSCVAG00000004508	-	59	46.377	ENSCVAG00000002252	-	99	46.377
ENSCVAG00000004508	-	99	44.444	ENSCVAG00000020414	-	99	44.444
ENSCVAG00000004508	-	60	40.000	ENSCVAG00000014269	-	97	40.000
ENSCVAG00000004508	-	84	37.982	ENSCVAG00000002833	-	83	37.982
ENSCVAG00000004508	-	98	48.673	ENSCVAG00000023054	-	88	48.673
ENSCVAG00000004508	-	65	41.553	ENSCVAG00000011235	-	86	41.553
ENSCVAG00000004508	-	62	47.619	ENSCVAG00000020141	-	62	47.619
ENSCVAG00000004508	-	59	39.437	ENSCVAG00000020968	-	51	39.437
ENSCVAG00000004508	-	68	36.869	ENSCVAG00000004222	-	63	37.129
ENSCVAG00000004508	-	83	45.455	ENSCVAG00000012302	-	99	45.455
ENSCVAG00000004508	-	73	46.789	ENSCVAG00000015153	-	79	46.789
ENSCVAG00000004508	-	83	44.690	ENSCVAG00000003428	-	97	44.690
ENSCVAG00000004508	-	61	43.056	ENSCVAG00000016898	-	93	43.056
ENSCVAG00000004508	-	88	43.182	ENSCVAG00000013382	-	81	43.182
ENSCVAG00000004508	-	74	42.336	ENSCVAG00000018383	-	95	61.224
ENSCVAG00000004508	-	80	44.545	ENSCVAG00000008206	-	95	44.545
ENSCVAG00000004508	-	61	46.818	ENSCVAG00000016862	-	92	49.537
ENSCVAG00000004508	-	56	39.610	ENSCVAG00000004388	-	57	39.610
ENSCVAG00000004508	-	82	36.402	ENSCVAG00000013692	prdm5	63	36.402
ENSCVAG00000004508	-	78	32.343	ENSCVAG00000003434	-	96	32.343
ENSCVAG00000004508	-	99	42.593	ENSCVAG00000006659	-	98	42.593
ENSCVAG00000004508	-	76	44.444	ENSCVAG00000006653	-	87	44.444
ENSCVAG00000004508	-	63	34.703	ENSCVAG00000022174	-	63	34.703
ENSCVAG00000004508	-	59	43.878	ENSCVAG00000002242	-	90	43.878
ENSCVAG00000004508	-	78	39.860	ENSCVAG00000006491	-	83	39.860
ENSCVAG00000004508	-	57	41.176	ENSCVAG00000014622	-	94	41.818
ENSCVAG00000004508	-	68	41.706	ENSCVAG00000003433	-	98	41.706
ENSCVAG00000004508	-	57	51.852	ENSCVAG00000012620	-	96	51.852
ENSCVAG00000004508	-	57	40.909	ENSCVAG00000004368	-	63	40.909
ENSCVAG00000004508	-	76	45.455	ENSCVAG00000000423	-	97	45.455
ENSCVAG00000004508	-	58	55.319	ENSCVAG00000012207	-	87	55.319
ENSCVAG00000004508	-	76	46.377	ENSCVAG00000016796	-	82	52.542
ENSCVAG00000004508	-	56	44.388	ENSCVAG00000020155	-	84	44.388
ENSCVAG00000004508	-	59	45.588	ENSCVAG00000009103	-	86	45.588
ENSCVAG00000004508	-	62	42.273	ENSCVAG00000014404	-	85	42.273
ENSCVAG00000004508	-	73	47.761	ENSCVAG00000016964	-	95	47.761
ENSCVAG00000004508	-	88	43.182	ENSCVAG00000016181	-	98	42.446
ENSCVAG00000004508	-	82	45.333	ENSCVAG00000012543	-	99	46.364
ENSCVAG00000004508	-	57	39.837	ENSCVAG00000003512	-	98	38.735
ENSCVAG00000004508	-	84	40.909	ENSCVAG00000003514	-	96	42.727
ENSCVAG00000004508	-	57	40.271	ENSCVAG00000002506	-	96	40.271
ENSCVAG00000004508	-	62	41.176	ENSCVAG00000002500	-	89	41.176
ENSCVAG00000004508	-	85	36.387	ENSCVAG00000019646	-	89	36.387
ENSCVAG00000004508	-	64	41.379	ENSCVAG00000014734	-	98	39.535
ENSCVAG00000004508	-	100	48.214	ENSCVAG00000016883	-	98	48.214
ENSCVAG00000004508	-	77	34.076	ENSCVAG00000003497	-	94	41.096
ENSCVAG00000004508	-	78	40.086	ENSCVAG00000014322	-	100	40.086
ENSCVAG00000004508	-	76	45.455	ENSCVAG00000008200	-	98	45.455
ENSCVAG00000004508	-	77	35.897	ENSCVAG00000011334	-	94	35.897
ENSCVAG00000004508	-	56	47.368	ENSCVAG00000012682	-	64	47.368
ENSCVAG00000004508	-	62	43.243	ENSCVAG00000004382	-	86	43.243
ENSCVAG00000004508	-	56	44.545	ENSCVAG00000012343	-	92	44.545
ENSCVAG00000004508	-	77	46.119	ENSCVAG00000005494	-	99	46.119
ENSCVAG00000004508	-	56	42.273	ENSCVAG00000017511	-	88	42.273
ENSCVAG00000004508	-	57	39.806	ENSCVAG00000017515	-	82	39.806
ENSCVAG00000004508	-	60	41.333	ENSCVAG00000004958	-	87	41.333
ENSCVAG00000004508	-	80	40.828	ENSCVAG00000019705	-	88	40.828
ENSCVAG00000004508	-	87	56.863	ENSCVAG00000001568	-	99	43.243
ENSCVAG00000004508	-	56	43.396	ENSCVAG00000009827	-	97	43.396
ENSCVAG00000004508	-	56	45.909	ENSCVAG00000001417	-	95	45.909
ENSCVAG00000004508	-	99	46.154	ENSCVAG00000006484	-	96	46.154
ENSCVAG00000004508	-	57	43.836	ENSCVAG00000012399	-	86	43.836
ENSCVAG00000004508	-	60	34.137	ENSCVAG00000013048	-	68	33.824
ENSCVAG00000004508	-	89	45.000	ENSCVAG00000000419	-	94	45.000
ENSCVAG00000004508	-	62	44.595	ENSCVAG00000012216	-	81	44.595
ENSCVAG00000004508	-	77	46.544	ENSCVAG00000011469	-	99	46.544
ENSCVAG00000004508	-	99	48.780	ENSCVAG00000013337	-	100	48.780
ENSCVAG00000004508	-	83	43.182	ENSCVAG00000011213	-	99	43.182
ENSCVAG00000004508	-	65	36.628	ENSCVAG00000016534	-	56	36.628
ENSCVAG00000004508	-	84	45.291	ENSCVAG00000020126	-	89	45.291
ENSCVAG00000004508	-	99	45.455	ENSCVAG00000005112	-	90	46.667
ENSCVAG00000004508	-	56	42.012	ENSCVAG00000008952	-	90	42.012
ENSCVAG00000004508	-	63	41.014	ENSCVAG00000019097	-	55	41.014
ENSCVAG00000004508	-	56	37.234	ENSCVAG00000008425	-	52	37.234
ENSCVAG00000004508	-	88	37.968	ENSCVAG00000008535	-	90	35.405
ENSCVAG00000004508	-	82	49.020	ENSCVAG00000006460	-	93	49.020
ENSCVAG00000004508	-	62	42.857	ENSCVAG00000012248	-	90	42.857
ENSCVAG00000004508	-	64	38.991	ENSCVAG00000009747	-	59	38.991
ENSCVAG00000004508	-	57	57.895	ENSCVAG00000018485	-	97	57.895
ENSCVAG00000004508	-	79	37.811	ENSCVAG00000003396	-	60	37.811
ENSCVAG00000004508	-	78	38.019	ENSCVAG00000019537	-	90	38.019
ENSCVAG00000004508	-	90	42.169	ENSCVAG00000010442	-	99	45.000
ENSCVAG00000004508	-	56	37.755	ENSCVAG00000009258	znf319b	85	37.755
ENSCVAG00000004508	-	92	47.032	ENSCVAG00000022991	-	99	45.000
ENSCVAG00000004508	-	57	51.786	ENSCVAG00000017005	sall3b	65	51.786
ENSCVAG00000004508	-	60	49.057	ENSCVAG00000010887	-	50	49.057
ENSCVAG00000004508	-	83	45.783	ENSCVAG00000012228	-	99	45.783
ENSCVAG00000004508	-	66	35.793	ENSCVAG00000002305	-	90	35.793
ENSCVAG00000004508	-	80	35.110	ENSCVAG00000002307	-	89	35.110
ENSCVAG00000004508	-	76	42.254	ENSCVAG00000015616	-	96	42.254
ENSCVAG00000004508	-	73	42.105	ENSCVAG00000009981	-	99	42.105
ENSCVAG00000004508	-	65	39.437	ENSCVAG00000016098	-	98	39.437
ENSCVAG00000004508	-	90	33.333	ENSCVAG00000016092	-	76	37.387
ENSCVAG00000004508	-	62	43.902	ENSCVAG00000007051	-	99	43.902
ENSCVAG00000004508	-	99	50.000	ENSCVAG00000016906	-	100	50.000
ENSCVAG00000004508	-	78	44.949	ENSCVAG00000000144	-	84	44.444
ENSCVAG00000004508	-	57	42.411	ENSCVAG00000001444	-	95	42.411
ENSCVAG00000004508	-	59	39.062	ENSCVAG00000002488	-	75	39.062
ENSCVAG00000004508	-	57	39.594	ENSCVAG00000007169	-	50	39.594
ENSCVAG00000004508	-	64	48.780	ENSCVAG00000000227	-	70	48.780
ENSCVAG00000004508	-	76	51.786	ENSCVAG00000001609	-	85	51.786
ENSCVAG00000004508	-	78	42.857	ENSCVAG00000006389	-	96	47.500
ENSCVAG00000004508	-	91	37.179	ENSCVAG00000008327	zbtb41	57	37.179
ENSCVAG00000004508	-	84	45.614	ENSCVAG00000018494	-	50	44.828
ENSCVAG00000004508	-	81	30.556	ENSCVAG00000012420	si:dkey-89b17.4	58	30.556
ENSCVAG00000004508	-	60	41.860	ENSCVAG00000002295	-	78	41.667
ENSCVAG00000004508	-	92	43.182	ENSCVAG00000012284	-	96	43.182
ENSCVAG00000004508	-	65	44.828	ENSCVAG00000003250	-	71	44.828
ENSCVAG00000004508	-	99	38.889	ENSCVAG00000000161	-	99	38.889
ENSCVAG00000004508	-	82	55.814	ENSCVAG00000017890	-	94	55.814
ENSCVAG00000004508	-	57	36.782	ENSCVAG00000019574	-	77	36.782
ENSCVAG00000004508	-	81	52.083	ENSCVAG00000001369	-	95	43.612
ENSCVAG00000004508	-	62	46.465	ENSCVAG00000006673	-	55	46.465
ENSCVAG00000004508	-	79	46.696	ENSCVAG00000019767	-	76	46.696
ENSCVAG00000004508	-	66	45.763	ENSCVAG00000019764	-	68	45.763
ENSCVAG00000004508	-	58	42.424	ENSCVAG00000017168	gfi1b	56	42.424
ENSCVAG00000004508	-	99	45.178	ENSCVAG00000016915	-	100	45.178
ENSCVAG00000004508	-	57	47.436	ENSCVAG00000016483	snai2	54	47.436
ENSCVAG00000004508	-	76	51.562	ENSCVAG00000020745	-	84	62.162
ENSCVAG00000004508	-	58	43.931	ENSCVAG00000003630	-	74	43.455
ENSCVAG00000004508	-	70	42.466	ENSCVAG00000009752	-	62	42.466
ENSCVAG00000004508	-	60	44.545	ENSCVAG00000005507	-	90	46.023
ENSCVAG00000004508	-	93	44.643	ENSCVAG00000021107	-	99	47.788
ENSCVAG00000004508	-	83	35.979	ENSCVAG00000000351	-	77	35.979
ENSCVAG00000004508	-	61	40.367	ENSCVAG00000018507	-	86	40.367
ENSCVAG00000004508	-	81	43.697	ENSCVAG00000001767	-	93	43.697
ENSCVAG00000004508	-	80	32.243	ENSCVAG00000019519	-	63	32.243
ENSCVAG00000004508	-	78	44.643	ENSCVAG00000012180	-	98	44.643
ENSCVAG00000004508	-	87	36.859	ENSCVAG00000021225	-	89	60.606
ENSCVAG00000004508	-	56	48.438	ENSCVAG00000009561	scrt1b	51	48.438
ENSCVAG00000004508	-	69	39.698	ENSCVAG00000003601	ZNF319	85	39.698
ENSCVAG00000004508	-	57	40.909	ENSCVAG00000002284	-	93	35.897
ENSCVAG00000004508	-	56	30.672	ENSCVAG00000018135	-	86	30.672
ENSCVAG00000004508	-	56	43.077	ENSCVAG00000012520	-	79	43.077
ENSCVAG00000004508	-	58	36.170	ENSCVAG00000019122	-	100	36.170
ENSCVAG00000004508	-	61	40.000	ENSCVAG00000008836	-	61	40.127

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004508	-	73	44.330	ENSAPOG00000000128	-	64	37.195	Acanthochromis_polyacanthus
ENSCVAG00000004508	-	98	41.818	ENSAPOG00000021496	-	96	41.818	Acanthochromis_polyacanthus
ENSCVAG00000004508	-	85	39.286	ENSACIG00000016133	-	89	39.286	Amphilophus_citrinellus
ENSCVAG00000004508	-	83	37.984	ENSAOCG00000000463	-	61	34.451	Amphiprion_ocellaris
ENSCVAG00000004508	-	98	42.593	ENSAPEG00000010478	-	95	42.593	Amphiprion_percula
ENSCVAG00000004508	-	75	32.237	ENSAPEG00000011635	-	85	32.237	Amphiprion_percula
ENSCVAG00000004508	-	97	35.185	ENSATEG00000024549	-	97	35.185	Anabas_testudineus
ENSCVAG00000004508	-	63	39.362	ENSATEG00000015828	-	65	39.130	Anabas_testudineus
ENSCVAG00000004508	-	78	41.892	ENSATEG00000011235	-	90	42.202	Anabas_testudineus
ENSCVAG00000004508	-	84	44.643	ENSATEG00000024551	-	79	44.643	Anabas_testudineus
ENSCVAG00000004508	-	59	36.715	ENSATEG00000022022	-	92	36.715	Anabas_testudineus
ENSCVAG00000004508	-	99	38.750	ENSAMXG00000037699	-	96	38.750	Astyanax_mexicanus
ENSCVAG00000004508	-	99	37.805	ENSAMXG00000035090	-	98	37.805	Astyanax_mexicanus
ENSCVAG00000004508	-	58	41.146	ENSELUG00000008171	-	100	36.620	Esox_lucius
ENSCVAG00000004508	-	59	35.758	ENSHBUG00000000731	-	92	35.652	Haplochromis_burtoni
ENSCVAG00000004508	-	62	33.209	ENSHBUG00000002878	-	56	33.209	Haplochromis_burtoni
ENSCVAG00000004508	-	83	38.806	ENSHCOG00000008205	-	71	47.619	Hippocampus_comes
ENSCVAG00000004508	-	99	39.640	ENSIPUG00000024007	-	98	39.640	Ictalurus_punctatus
ENSCVAG00000004508	-	56	43.590	ENSKMAG00000000539	-	100	40.909	Kryptolebias_marmoratus
ENSCVAG00000004508	-	77	37.736	ENSKMAG00000000520	-	98	30.514	Kryptolebias_marmoratus
ENSCVAG00000004508	-	57	37.500	ENSLBEG00000014527	-	55	37.500	Labrus_bergylta
ENSCVAG00000004508	-	99	38.974	ENSLBEG00000011006	-	99	38.974	Labrus_bergylta
ENSCVAG00000004508	-	67	37.234	ENSLBEG00000014676	-	71	37.234	Labrus_bergylta
ENSCVAG00000004508	-	57	40.741	ENSLBEG00000026552	-	98	40.741	Labrus_bergylta
ENSCVAG00000004508	-	68	40.000	ENSMAMG00000022152	-	54	40.000	Mastacembelus_armatus
ENSCVAG00000004508	-	59	36.287	ENSMZEG00005004047	-	92	35.652	Maylandia_zebra
ENSCVAG00000004508	-	91	36.508	ENSMMOG00000007067	-	55	36.508	Mola_mola
ENSCVAG00000004508	-	64	36.458	ENSMALG00000014761	-	69	36.458	Monopterus_albus
ENSCVAG00000004508	-	63	36.916	ENSNBRG00000004381	-	76	43.750	Neolamprologus_brichardi
ENSCVAG00000004508	-	84	43.434	ENSNBRG00000013838	-	99	43.434	Neolamprologus_brichardi
ENSCVAG00000004508	-	84	40.606	ENSORLG00000025719	-	97	32.500	Oryzias_latipes
ENSCVAG00000004508	-	57	37.500	ENSORLG00020009554	-	77	37.500	Oryzias_latipes_hni
ENSCVAG00000004508	-	56	41.558	ENSORLG00020005815	-	73	32.407	Oryzias_latipes_hni
ENSCVAG00000004508	-	84	40.606	ENSORLG00015012599	-	97	31.944	Oryzias_latipes_hsok
ENSCVAG00000004508	-	100	40.606	ENSOMEG00000010906	-	99	40.606	Oryzias_melastigma
ENSCVAG00000004508	-	58	40.964	ENSOMEG00000015640	-	70	40.964	Oryzias_melastigma
ENSCVAG00000004508	-	97	38.849	ENSPFOG00000012948	-	95	38.849	Poecilia_formosa
ENSCVAG00000004508	-	85	43.548	ENSPLAG00000009651	-	92	43.548	Poecilia_latipinna
ENSCVAG00000004508	-	64	39.157	ENSPMEG00000023113	-	65	39.157	Poecilia_mexicana
ENSCVAG00000004508	-	50	41.429	ENSPREG00000000853	-	51	41.429	Poecilia_reticulata
ENSCVAG00000004508	-	90	44.271	ENSPREG00000018011	-	68	44.271	Poecilia_reticulata
ENSCVAG00000004508	-	67	32.872	ENSPREG00000016270	-	75	41.739	Poecilia_reticulata
ENSCVAG00000004508	-	99	38.554	ENSPREG00000004006	-	100	38.554	Poecilia_reticulata
ENSCVAG00000004508	-	62	37.083	ENSPNYG00000023882	-	69	37.083	Pundamilia_nyererei
ENSCVAG00000004508	-	57	40.714	ENSPNYG00000019187	-	67	41.395	Pundamilia_nyererei
ENSCVAG00000004508	-	58	42.489	ENSPNAG00000010317	-	82	42.489	Pygocentrus_nattereri
ENSCVAG00000004508	-	56	43.750	ENSSLDG00000007568	-	72	43.750	Seriola_lalandi_dorsalis
ENSCVAG00000004508	-	56	51.852	ENSSPAG00000021950	-	60	51.852	Stegastes_partitus
ENSCVAG00000004508	-	98	42.593	ENSSPAG00000010524	-	99	42.593	Stegastes_partitus
ENSCVAG00000004508	-	60	40.455	ENSXETG00000002690	-	53	40.455	Xenopus_tropicalis
ENSCVAG00000004508	-	57	43.662	ENSXCOG00000018315	-	87	43.662	Xiphophorus_couchianus