EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004556 (Gene tree)
Gene ID: 107088972
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 26927 bases
Position: chrKL652734.1:169067-195993
Accession: 107088972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003325	rRNA_proc-arch	PF13234.6	6.3e-90	1	1
ENSCVAP00000003325	DEAD	PF00270.29	9.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000010218	-	4772	XM_015381448	ENSCVAP00000003325	1036 (aa)	XP_015236934	UPI00074285B4

Gene Model

Click here to download ENSCVAG00000004556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004556	mtrex	90	35.633	ENSCVAG00000003072	skiv2l	80	36.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004556	mtrex	100	83.381	ENSG00000039123	MTREX	100	83.381	Homo_sapiens
ENSCVAG00000004556	mtrex	100	94.503	ENSAPOG00000007814	mtrex	100	94.503	Acanthochromis_polyacanthus
ENSCVAG00000004556	mtrex	100	83.666	ENSAMEG00000013856	MTREX	100	83.571	Ailuropoda_melanoleuca
ENSCVAG00000004556	mtrex	100	90.646	ENSACIG00000015117	mtrex	100	90.550	Amphilophus_citrinellus
ENSCVAG00000004556	mtrex	100	94.600	ENSAOCG00000011884	mtrex	100	94.600	Amphiprion_ocellaris
ENSCVAG00000004556	mtrex	100	94.600	ENSAPEG00000019384	mtrex	100	94.600	Amphiprion_percula
ENSCVAG00000004556	mtrex	100	93.346	ENSATEG00000015117	mtrex	100	93.346	Anabas_testudineus
ENSCVAG00000004556	mtrex	94	87.090	ENSAPLG00000009694	MTREX	98	87.103	Anas_platyrhynchos
ENSCVAG00000004556	mtrex	100	84.100	ENSACAG00000015200	MTREX	96	83.828	Anolis_carolinensis
ENSCVAG00000004556	mtrex	100	83.954	ENSANAG00000023095	MTREX	100	83.985	Aotus_nancymaae
ENSCVAG00000004556	mtrex	100	93.443	ENSACLG00000001921	mtrex	100	93.443	Astatotilapia_calliptera
ENSCVAG00000004556	mtrex	95	86.640	ENSAMXG00000018751	mtrex	99	86.437	Astyanax_mexicanus
ENSCVAG00000004556	mtrex	100	83.874	ENSBTAG00000010518	MTREX	100	83.779	Bos_taurus
ENSCVAG00000004556	mtrex	91	54.091	WBGene00012342	mtr-4	91	54.091	Caenorhabditis_elegans
ENSCVAG00000004556	mtrex	100	82.720	ENSCJAG00000001773	MTREX	100	82.347	Callithrix_jacchus
ENSCVAG00000004556	mtrex	100	83.714	ENSCAFG00000006818	MTREX	100	82.908	Canis_familiaris
ENSCVAG00000004556	mtrex	100	83.714	ENSCAFG00020024352	MTREX	100	82.908	Canis_lupus_dingo
ENSCVAG00000004556	mtrex	100	83.619	ENSCHIG00000024413	MTREX	100	83.460	Capra_hircus
ENSCVAG00000004556	mtrex	93	85.278	ENSTSYG00000007389	MTREX	100	85.278	Carlito_syrichta
ENSCVAG00000004556	mtrex	86	76.712	ENSCAPG00000008696	MTREX	91	76.712	Cavia_aperea
ENSCVAG00000004556	mtrex	100	83.699	ENSCPOG00000009797	MTREX	100	83.003	Cavia_porcellus
ENSCVAG00000004556	mtrex	100	83.954	ENSCCAG00000014177	MTREX	100	83.985	Cebus_capucinus
ENSCVAG00000004556	mtrex	100	83.572	ENSCATG00000042153	MTREX	100	83.699	Cercocebus_atys
ENSCVAG00000004556	mtrex	100	83.763	ENSCLAG00000006622	MTREX	100	83.763	Chinchilla_lanigera
ENSCVAG00000004556	mtrex	100	79.810	ENSCSAG00000016445	MTREX	100	79.943	Chlorocebus_sabaeus
ENSCVAG00000004556	mtrex	61	95.833	ENSCHOG00000010936	-	62	95.833	Choloepus_hoffmanni
ENSCVAG00000004556	mtrex	100	84.038	ENSCPBG00000026551	MTREX	94	84.135	Chrysemys_picta_bellii
ENSCVAG00000004556	mtrex	99	65.484	ENSCING00000003239	-	99	65.388	Ciona_intestinalis
ENSCVAG00000004556	mtrex	99	64.593	ENSCSAVG00000009304	-	99	69.462	Ciona_savignyi
ENSCVAG00000004556	mtrex	100	83.603	ENSCANG00000035770	MTREX	100	83.603	Colobus_angolensis_palliatus
ENSCVAG00000004556	mtrex	100	83.779	ENSCGRG00001024680	Mtrex	100	83.843	Cricetulus_griseus_chok1gshd
ENSCVAG00000004556	mtrex	100	83.779	ENSCGRG00000000307	Mtrex	100	83.843	Cricetulus_griseus_crigri
ENSCVAG00000004556	mtrex	100	91.225	ENSCSEG00000018621	mtrex	98	91.128	Cynoglossus_semilaevis
ENSCVAG00000004556	mtrex	100	86.500	ENSDARG00000013457	mtrex	100	86.307	Danio_rerio
ENSCVAG00000004556	mtrex	100	83.444	ENSDNOG00000015375	MTREX	100	83.460	Dasypus_novemcinctus
ENSCVAG00000004556	mtrex	100	83.859	ENSDORG00000006782	Mtrex	100	83.889	Dipodomys_ordii
ENSCVAG00000004556	mtrex	98	63.168	FBgn0001986	Mtr4	94	63.762	Drosophila_melanogaster
ENSCVAG00000004556	mtrex	90	67.907	ENSETEG00000000727	MTREX	90	67.907	Echinops_telfairi
ENSCVAG00000004556	mtrex	99	73.192	ENSEBUG00000012869	mtrex	99	72.921	Eptatretus_burgeri
ENSCVAG00000004556	mtrex	100	83.238	ENSEASG00005013270	MTREX	100	83.603	Equus_asinus_asinus
ENSCVAG00000004556	mtrex	100	83.333	ENSECAG00000023723	MTREX	100	89.815	Equus_caballus
ENSCVAG00000004556	mtrex	98	75.728	ENSEEUG00000000527	MTREX	100	75.678	Erinaceus_europaeus
ENSCVAG00000004556	mtrex	98	87.378	ENSELUG00000004898	mtrex	100	91.605	Esox_lucius
ENSCVAG00000004556	mtrex	100	83.794	ENSFCAG00000010575	MTREX	100	83.699	Felis_catus
ENSCVAG00000004556	mtrex	100	82.676	ENSFALG00000010850	MTREX	100	82.821	Ficedula_albicollis
ENSCVAG00000004556	mtrex	100	83.413	ENSFDAG00000011199	MTREX	100	83.541	Fukomys_damarensis
ENSCVAG00000004556	mtrex	100	96.236	ENSFHEG00000023014	mtrex	100	93.726	Fundulus_heteroclitus
ENSCVAG00000004556	mtrex	100	85.921	ENSGMOG00000014702	mtrex	100	85.921	Gadus_morhua
ENSCVAG00000004556	mtrex	100	83.703	ENSGALG00000014709	MTREX	86	83.703	Gallus_gallus
ENSCVAG00000004556	mtrex	100	95.656	ENSGAFG00000012425	mtrex	100	95.656	Gambusia_affinis
ENSCVAG00000004556	mtrex	100	87.078	ENSGACG00000016260	mtrex	96	92.065	Gasterosteus_aculeatus
ENSCVAG00000004556	mtrex	100	84.038	ENSGAGG00000020036	MTREX	100	84.165	Gopherus_agassizii
ENSCVAG00000004556	mtrex	100	83.477	ENSGGOG00000001867	MTREX	100	83.477	Gorilla_gorilla
ENSCVAG00000004556	mtrex	100	93.443	ENSHBUG00000006229	mtrex	100	93.443	Haplochromis_burtoni
ENSCVAG00000004556	mtrex	100	83.828	ENSHGLG00000019445	SKIV2L2	100	83.828	Heterocephalus_glaber_female
ENSCVAG00000004556	mtrex	100	83.828	ENSHGLG00100011833	SKIV2L2	100	83.828	Heterocephalus_glaber_male
ENSCVAG00000004556	mtrex	92	90.316	ENSHCOG00000019995	mtrex	100	90.316	Hippocampus_comes
ENSCVAG00000004556	mtrex	100	85.659	ENSIPUG00000024348	skiv2l2	100	85.756	Ictalurus_punctatus
ENSCVAG00000004556	mtrex	100	83.572	ENSSTOG00000010802	MTREX	100	83.603	Ictidomys_tridecemlineatus
ENSCVAG00000004556	mtrex	100	79.155	ENSJJAG00000020975	Mtrex	100	79.175	Jaculus_jaculus
ENSCVAG00000004556	mtrex	100	94.208	ENSKMAG00000012642	mtrex	100	94.208	Kryptolebias_marmoratus
ENSCVAG00000004556	mtrex	100	93.057	ENSLBEG00000019367	mtrex	100	93.057	Labrus_bergylta
ENSCVAG00000004556	mtrex	100	84.297	ENSLACG00000009075	MTREX	100	84.312	Latimeria_chalumnae
ENSCVAG00000004556	mtrex	100	86.002	ENSLOCG00000010186	mtrex	100	86.002	Lepisosteus_oculatus
ENSCVAG00000004556	mtrex	99	81.644	ENSLAFG00000010497	MTREX	100	81.679	Loxodonta_africana
ENSCVAG00000004556	mtrex	100	83.572	ENSMFAG00000031610	MTREX	100	83.699	Macaca_fascicularis
ENSCVAG00000004556	mtrex	100	83.333	ENSMMUG00000010379	MTREX	100	83.460	Macaca_mulatta
ENSCVAG00000004556	mtrex	100	83.572	ENSMNEG00000032746	MTREX	100	83.699	Macaca_nemestrina
ENSCVAG00000004556	mtrex	100	83.572	ENSMLEG00000041051	MTREX	100	83.699	Mandrillus_leucophaeus
ENSCVAG00000004556	mtrex	100	90.453	ENSMAMG00000016753	mtrex	98	94.277	Mastacembelus_armatus
ENSCVAG00000004556	mtrex	100	93.443	ENSMZEG00005000414	mtrex	100	93.443	Maylandia_zebra
ENSCVAG00000004556	mtrex	95	62.500	ENSMGAG00000003980	MTREX	99	62.298	Meleagris_gallopavo
ENSCVAG00000004556	mtrex	100	83.779	ENSMAUG00000010727	Mtrex	100	83.843	Mesocricetus_auratus
ENSCVAG00000004556	mtrex	100	83.954	ENSMICG00000012779	MTREX	100	83.985	Microcebus_murinus
ENSCVAG00000004556	mtrex	100	83.508	ENSMOCG00000019886	Mtrex	100	83.572	Microtus_ochrogaster
ENSCVAG00000004556	mtrex	100	89.788	ENSMMOG00000002476	mtrex	100	89.585	Mola_mola
ENSCVAG00000004556	mtrex	100	83.750	ENSMODG00000019494	MTREX	100	83.862	Monodelphis_domestica
ENSCVAG00000004556	mtrex	93	90.000	ENSMALG00000002917	mtrex	99	90.000	Monopterus_albus
ENSCVAG00000004556	mtrex	100	84.019	MGP_CAROLIEiJ_G0018896	Mtrex	100	84.019	Mus_caroli
ENSCVAG00000004556	mtrex	100	83.923	ENSMUSG00000016018	Mtrex	100	83.923	Mus_musculus
ENSCVAG00000004556	mtrex	100	83.636	MGP_PahariEiJ_G0015967	Mtrex	100	83.636	Mus_pahari
ENSCVAG00000004556	mtrex	100	83.923	MGP_SPRETEiJ_G0019775	Mtrex	100	83.923	Mus_spretus
ENSCVAG00000004556	mtrex	100	83.668	ENSMPUG00000007619	MTREX	100	83.699	Mustela_putorius_furo
ENSCVAG00000004556	mtrex	100	83.238	ENSMLUG00000001152	MTREX	100	83.159	Myotis_lucifugus
ENSCVAG00000004556	mtrex	100	83.668	ENSNGAG00000011938	Mtrex	100	83.699	Nannospalax_galili
ENSCVAG00000004556	mtrex	100	93.443	ENSNBRG00000011293	mtrex	100	93.443	Neolamprologus_brichardi
ENSCVAG00000004556	mtrex	100	79.790	ENSNLEG00000001494	MTREX	100	79.829	Nomascus_leucogenys
ENSCVAG00000004556	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSCVAG00000004556	mtrex	100	70.881	ENSOPRG00000008009	MTREX	100	70.734	Ochotona_princeps
ENSCVAG00000004556	mtrex	100	83.095	ENSODEG00000017234	MTREX	100	83.127	Octodon_degus
ENSCVAG00000004556	mtrex	100	93.153	ENSONIG00000007587	mtrex	100	93.153	Oreochromis_niloticus
ENSCVAG00000004556	mtrex	50	83.915	ENSOANG00000004885	-	99	83.946	Ornithorhynchus_anatinus
ENSCVAG00000004556	mtrex	100	84.211	ENSOCUG00000004463	MTREX	100	84.211	Oryctolagus_cuniculus
ENSCVAG00000004556	mtrex	100	93.443	ENSORLG00000005443	mtrex	100	93.443	Oryzias_latipes
ENSCVAG00000004556	mtrex	100	93.346	ENSORLG00020006329	mtrex	100	93.346	Oryzias_latipes_hni
ENSCVAG00000004556	mtrex	100	93.250	ENSORLG00015012924	mtrex	100	93.250	Oryzias_latipes_hsok
ENSCVAG00000004556	mtrex	100	93.648	ENSOMEG00000008825	mtrex	100	93.359	Oryzias_melastigma
ENSCVAG00000004556	mtrex	100	83.763	ENSOGAG00000002886	MTREX	100	83.794	Otolemur_garnettii
ENSCVAG00000004556	mtrex	100	83.381	ENSOARG00000007764	MTREX	100	83.223	Ovis_aries
ENSCVAG00000004556	mtrex	100	83.572	ENSPPAG00000039291	MTREX	100	83.477	Pan_paniscus
ENSCVAG00000004556	mtrex	100	83.794	ENSPPRG00000019701	MTREX	100	83.699	Panthera_pardus
ENSCVAG00000004556	mtrex	100	82.364	ENSPTIG00000009313	MTREX	100	82.269	Panthera_tigris_altaica
ENSCVAG00000004556	mtrex	100	83.572	ENSPTRG00000016878	MTREX	100	83.477	Pan_troglodytes
ENSCVAG00000004556	mtrex	100	83.477	ENSPANG00000009697	MTREX	100	83.603	Papio_anubis
ENSCVAG00000004556	mtrex	100	85.852	ENSPKIG00000020833	mtrex	100	85.563	Paramormyrops_kingsleyae
ENSCVAG00000004556	mtrex	100	84.200	ENSPSIG00000012150	MTREX	100	84.216	Pelodiscus_sinensis
ENSCVAG00000004556	mtrex	100	89.884	ENSPMGG00000002582	mtrex	100	89.595	Periophthalmus_magnuspinnatus
ENSCVAG00000004556	mtrex	95	65.365	ENSPMAG00000009668	mtrex	100	65.657	Petromyzon_marinus
ENSCVAG00000004556	mtrex	92	88.340	ENSPCIG00000024730	MTREX	100	88.353	Phascolarctos_cinereus
ENSCVAG00000004556	mtrex	76	97.967	ENSPFOG00000003141	mtrex	100	97.967	Poecilia_formosa
ENSCVAG00000004556	mtrex	100	96.236	ENSPLAG00000021311	mtrex	100	96.236	Poecilia_latipinna
ENSCVAG00000004556	mtrex	92	96.447	ENSPMEG00000010597	mtrex	99	96.447	Poecilia_mexicana
ENSCVAG00000004556	mtrex	100	96.042	ENSPREG00000003089	mtrex	100	96.042	Poecilia_reticulata
ENSCVAG00000004556	mtrex	98	83.204	ENSPPYG00000015469	MTREX	98	83.204	Pongo_abelii
ENSCVAG00000004556	mtrex	94	74.419	ENSPCAG00000013120	MTREX	94	74.419	Procavia_capensis
ENSCVAG00000004556	mtrex	99	78.302	ENSPCOG00000018092	MTREX	100	78.302	Propithecus_coquereli
ENSCVAG00000004556	mtrex	100	83.572	ENSPVAG00000002445	MTREX	100	83.603	Pteropus_vampyrus
ENSCVAG00000004556	mtrex	100	93.346	ENSPNYG00000006164	mtrex	100	93.346	Pundamilia_nyererei
ENSCVAG00000004556	mtrex	100	87.392	ENSPNAG00000008794	mtrex	100	87.103	Pygocentrus_nattereri
ENSCVAG00000004556	mtrex	99	82.979	ENSRNOG00000010125	Mtrex	97	82.979	Rattus_norvegicus
ENSCVAG00000004556	mtrex	100	81.757	ENSRBIG00000034930	MTREX	100	81.888	Rhinopithecus_bieti
ENSCVAG00000004556	mtrex	100	83.477	ENSRROG00000039895	MTREX	100	83.603	Rhinopithecus_roxellana
ENSCVAG00000004556	mtrex	94	54.188	YJL050W	MTR4	92	53.838	Saccharomyces_cerevisiae
ENSCVAG00000004556	mtrex	100	83.859	ENSSBOG00000026693	MTREX	100	83.889	Saimiri_boliviensis_boliviensis
ENSCVAG00000004556	mtrex	95	86.802	ENSSHAG00000004600	MTREX	98	86.815	Sarcophilus_harrisii
ENSCVAG00000004556	mtrex	100	86.827	ENSSFOG00015014355	skiv2l2	100	86.564	Scleropages_formosus
ENSCVAG00000004556	mtrex	100	92.864	ENSSMAG00000007572	mtrex	100	92.864	Scophthalmus_maximus
ENSCVAG00000004556	mtrex	100	93.635	ENSSDUG00000023789	mtrex	100	93.635	Seriola_dumerili
ENSCVAG00000004556	mtrex	100	93.732	ENSSLDG00000006301	mtrex	100	93.732	Seriola_lalandi_dorsalis
ENSCVAG00000004556	mtrex	92	88.180	ENSSARG00000008387	MTREX	91	88.180	Sorex_araneus
ENSCVAG00000004556	mtrex	89	86.070	ENSSPUG00000007071	MTREX	96	86.070	Sphenodon_punctatus
ENSCVAG00000004556	mtrex	100	89.923	ENSSPAG00000011319	mtrex	100	89.923	Stegastes_partitus
ENSCVAG00000004556	mtrex	100	83.524	ENSSSCG00000016911	MTREX	100	83.555	Sus_scrofa
ENSCVAG00000004556	mtrex	100	82.342	ENSTGUG00000002480	MTREX	100	82.342	Taeniopygia_guttata
ENSCVAG00000004556	mtrex	100	90.935	ENSTRUG00000014571	mtrex	100	90.935	Takifugu_rubripes
ENSCVAG00000004556	mtrex	100	69.150	ENSTBEG00000007769	MTREX	100	69.238	Tupaia_belangeri
ENSCVAG00000004556	mtrex	100	83.683	ENSTTRG00000008678	MTREX	100	83.683	Tursiops_truncatus
ENSCVAG00000004556	mtrex	100	83.429	ENSUAMG00000023061	MTREX	100	83.603	Ursus_americanus
ENSCVAG00000004556	mtrex	100	83.462	ENSUMAG00000009373	MTREX	99	88.800	Ursus_maritimus
ENSCVAG00000004556	mtrex	100	74.525	ENSVPAG00000011174	MTREX	100	74.430	Vicugna_pacos
ENSCVAG00000004556	mtrex	100	83.810	ENSVVUG00000021337	MTREX	100	83.840	Vulpes_vulpes
ENSCVAG00000004556	mtrex	100	84.778	ENSXETG00000032798	MTREX	100	84.793	Xenopus_tropicalis
ENSCVAG00000004556	mtrex	100	95.946	ENSXMAG00000004799	mtrex	100	95.946	Xiphophorus_maculatus