EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004658 (Gene tree)
Gene ID: -
Gene Symbol: rasd4
Alias: im:7145881|zgc:153845
Full Name: rasd family member 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4968 bases
Position: chrKL653341.1:342436-347403
Accession: ZDB-GENE-050506-133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022154	MMR_HSR1	PF01926.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009984	-	630	-	ENSCVAP00000022154	209 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000004658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004658	rasd4	78	31.138	ENSCVAG00000000281	RAB7A	80	31.138
ENSCVAG00000004658	rasd4	78	31.138	ENSCVAG00000005429	-	80	31.138
ENSCVAG00000004658	rasd4	74	30.323	ENSCVAG00000008276	RAB15	73	30.323
ENSCVAG00000004658	rasd4	76	32.298	ENSCVAG00000004027	rheb	86	32.298
ENSCVAG00000004658	rasd4	80	34.270	ENSCVAG00000013135	rasl11a	69	34.270
ENSCVAG00000004658	rasd4	99	73.913	ENSCVAG00000014662	-	99	73.913
ENSCVAG00000004658	rasd4	82	30.857	ENSCVAG00000016312	rab9a	82	30.857
ENSCVAG00000004658	rasd4	84	33.846	ENSCVAG00000013578	rasl10a	96	33.846
ENSCVAG00000004658	rasd4	77	30.247	ENSCVAG00000017021	-	73	30.247
ENSCVAG00000004658	rasd4	78	31.579	ENSCVAG00000017064	si:dkey-34d22.5	75	31.579
ENSCVAG00000004658	rasd4	75	32.716	ENSCVAG00000018085	rab30	77	32.716
ENSCVAG00000004658	rasd4	75	30.247	ENSCVAG00000011665	rab33a	63	30.636
ENSCVAG00000004658	rasd4	78	32.530	ENSCVAG00000021826	rab9b	82	32.530
ENSCVAG00000004658	rasd4	92	32.642	ENSCVAG00000006083	si:cabz01085950.1	94	32.642
ENSCVAG00000004658	rasd4	78	31.737	ENSCVAG00000002953	RAB9A	83	31.737
ENSCVAG00000004658	rasd4	75	32.704	ENSCVAG00000008389	si:ch73-116o1.2	81	33.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004658	rasd4	99	91.304	ENSAPOG00000013337	rasd4	99	91.304	Acanthochromis_polyacanthus
ENSCVAG00000004658	rasd4	99	75.845	ENSAPOG00000014798	-	99	75.845	Acanthochromis_polyacanthus
ENSCVAG00000004658	rasd4	99	60.476	ENSAPOG00000019479	rasd3	99	60.476	Acanthochromis_polyacanthus
ENSCVAG00000004658	rasd4	99	76.812	ENSACIG00000006211	-	99	76.812	Amphilophus_citrinellus
ENSCVAG00000004658	rasd4	99	90.338	ENSACIG00000008211	rasd4	99	90.338	Amphilophus_citrinellus
ENSCVAG00000004658	rasd4	99	75.845	ENSAOCG00000013791	-	99	75.845	Amphiprion_ocellaris
ENSCVAG00000004658	rasd4	99	91.304	ENSAOCG00000011925	rasd4	99	91.304	Amphiprion_ocellaris
ENSCVAG00000004658	rasd4	99	75.845	ENSAPEG00000014385	-	99	75.845	Amphiprion_percula
ENSCVAG00000004658	rasd4	99	91.304	ENSAPEG00000001236	rasd4	99	91.304	Amphiprion_percula
ENSCVAG00000004658	rasd4	99	76.812	ENSATEG00000004140	rasd4	99	76.812	Anabas_testudineus
ENSCVAG00000004658	rasd4	99	90.338	ENSATEG00000004192	-	99	90.338	Anabas_testudineus
ENSCVAG00000004658	rasd4	99	89.855	ENSACLG00000005453	-	99	89.855	Astatotilapia_calliptera
ENSCVAG00000004658	rasd4	98	76.098	ENSCSEG00000017910	-	99	76.098	Cynoglossus_semilaevis
ENSCVAG00000004658	rasd4	98	90.732	ENSCSEG00000003581	rasd4	97	90.732	Cynoglossus_semilaevis
ENSCVAG00000004658	rasd4	86	48.913	FBgn0040370	CG13375	66	48.913	Drosophila_melanogaster
ENSCVAG00000004658	rasd4	85	47.458	ENSEBUG00000013908	rasd3	84	47.458	Eptatretus_burgeri
ENSCVAG00000004658	rasd4	99	82.857	ENSELUG00000008115	-	99	82.857	Esox_lucius
ENSCVAG00000004658	rasd4	98	75.610	ENSFALG00000000852	-	99	75.610	Ficedula_albicollis
ENSCVAG00000004658	rasd4	99	94.686	ENSFHEG00000003385	rasd4	99	94.686	Fundulus_heteroclitus
ENSCVAG00000004658	rasd4	99	72.947	ENSFHEG00000016103	-	99	72.947	Fundulus_heteroclitus
ENSCVAG00000004658	rasd4	99	94.203	ENSGAFG00000010126	rasd4	99	94.203	Gambusia_affinis
ENSCVAG00000004658	rasd4	99	87.923	ENSGACG00000019357	rasd4	99	87.923	Gasterosteus_aculeatus
ENSCVAG00000004658	rasd4	99	78.261	ENSGAGG00000022039	-	99	78.261	Gopherus_agassizii
ENSCVAG00000004658	rasd4	99	90.338	ENSHBUG00000003805	-	99	90.338	Haplochromis_burtoni
ENSCVAG00000004658	rasd4	99	72.947	ENSHCOG00000015161	-	99	72.947	Hippocampus_comes
ENSCVAG00000004658	rasd4	99	84.541	ENSHCOG00000018554	rasd4	99	84.541	Hippocampus_comes
ENSCVAG00000004658	rasd4	99	75.362	ENSIPUG00000021888	-	99	75.362	Ictalurus_punctatus
ENSCVAG00000004658	rasd4	99	93.720	ENSKMAG00000000984	rasd4	99	93.720	Kryptolebias_marmoratus
ENSCVAG00000004658	rasd4	99	75.845	ENSLACG00000001282	-	99	75.845	Latimeria_chalumnae
ENSCVAG00000004658	rasd4	99	71.981	ENSLACG00000003581	rasd3	99	71.981	Latimeria_chalumnae
ENSCVAG00000004658	rasd4	98	79.024	ENSLOCG00000017761	rasd4	99	79.024	Lepisosteus_oculatus
ENSCVAG00000004658	rasd4	99	70.952	ENSLOCG00000018104	rasd3	99	70.952	Lepisosteus_oculatus
ENSCVAG00000004658	rasd4	99	89.855	ENSMAMG00000001194	-	99	89.855	Mastacembelus_armatus
ENSCVAG00000004658	rasd4	99	89.855	ENSMZEG00005023931	-	99	89.855	Maylandia_zebra
ENSCVAG00000004658	rasd4	99	77.295	ENSMMOG00000012444	rasd4	99	77.295	Mola_mola
ENSCVAG00000004658	rasd4	98	78.049	ENSMALG00000019233	rasd4	99	78.049	Monopterus_albus
ENSCVAG00000004658	rasd4	99	90.338	ENSMALG00000022582	-	99	90.338	Monopterus_albus
ENSCVAG00000004658	rasd4	99	77.295	ENSNBRG00000001521	-	99	77.295	Neolamprologus_brichardi
ENSCVAG00000004658	rasd4	99	89.855	ENSONIG00000021230	-	99	89.855	Oreochromis_niloticus
ENSCVAG00000004658	rasd4	99	91.304	ENSORLG00020019402	rasd4	99	91.304	Oryzias_latipes_hni
ENSCVAG00000004658	rasd4	99	91.304	ENSORLG00015019530	rasd4	99	91.304	Oryzias_latipes_hsok
ENSCVAG00000004658	rasd4	99	90.338	ENSOMEG00000010545	rasd4	99	90.338	Oryzias_melastigma
ENSCVAG00000004658	rasd4	99	70.531	ENSOMEG00000019524	-	99	70.531	Oryzias_melastigma
ENSCVAG00000004658	rasd4	98	79.512	ENSPKIG00000007853	rasd4	99	79.512	Paramormyrops_kingsleyae
ENSCVAG00000004658	rasd4	99	61.905	ENSPKIG00000018772	-	99	61.905	Paramormyrops_kingsleyae
ENSCVAG00000004658	rasd4	99	66.190	ENSPKIG00000013103	rasd3	99	66.190	Paramormyrops_kingsleyae
ENSCVAG00000004658	rasd4	99	75.362	ENSPSIG00000001290	-	99	75.362	Pelodiscus_sinensis
ENSCVAG00000004658	rasd4	98	78.049	ENSPMGG00000012580	-	99	78.049	Periophthalmus_magnuspinnatus
ENSCVAG00000004658	rasd4	99	86.957	ENSPMGG00000000859	rasd4	99	86.957	Periophthalmus_magnuspinnatus
ENSCVAG00000004658	rasd4	99	71.981	ENSPLAG00000006115	-	99	71.981	Poecilia_latipinna
ENSCVAG00000004658	rasd4	99	94.686	ENSPLAG00000003951	rasd4	98	94.686	Poecilia_latipinna
ENSCVAG00000004658	rasd4	99	95.169	ENSPMEG00000021391	rasd4	98	95.169	Poecilia_mexicana
ENSCVAG00000004658	rasd4	99	72.464	ENSPMEG00000003690	-	99	72.464	Poecilia_mexicana
ENSCVAG00000004658	rasd4	99	95.169	ENSPREG00000017010	rasd4	99	95.169	Poecilia_reticulata
ENSCVAG00000004658	rasd4	99	72.464	ENSPREG00000015955	-	99	72.464	Poecilia_reticulata
ENSCVAG00000004658	rasd4	99	90.821	ENSPNYG00000016378	-	99	90.821	Pundamilia_nyererei
ENSCVAG00000004658	rasd4	99	82.126	ENSPNAG00000005318	-	99	82.126	Pygocentrus_nattereri
ENSCVAG00000004658	rasd4	99	65.238	ENSSFOG00015008777	rasd3	99	65.238	Scleropages_formosus
ENSCVAG00000004658	rasd4	99	83.575	ENSSFOG00015004613	rasd4	99	83.575	Scleropages_formosus
ENSCVAG00000004658	rasd4	99	90.338	ENSSMAG00000016456	rasd4	99	90.338	Scophthalmus_maximus
ENSCVAG00000004658	rasd4	99	76.699	ENSSMAG00000009101	-	99	76.699	Scophthalmus_maximus
ENSCVAG00000004658	rasd4	99	91.304	ENSSDUG00000020340	-	99	91.304	Seriola_dumerili
ENSCVAG00000004658	rasd4	99	78.261	ENSSDUG00000015982	rasd4	99	78.261	Seriola_dumerili
ENSCVAG00000004658	rasd4	99	90.821	ENSSLDG00000002757	-	98	90.821	Seriola_lalandi_dorsalis
ENSCVAG00000004658	rasd4	99	78.261	ENSSLDG00000017618	rasd4	99	78.261	Seriola_lalandi_dorsalis
ENSCVAG00000004658	rasd4	99	59.716	ENSSLDG00000016267	rasd3	98	59.716	Seriola_lalandi_dorsalis
ENSCVAG00000004658	rasd4	99	76.812	ENSSPAG00000011401	-	99	76.812	Stegastes_partitus
ENSCVAG00000004658	rasd4	99	90.821	ENSSPAG00000021839	rasd4	99	90.821	Stegastes_partitus
ENSCVAG00000004658	rasd4	98	76.098	ENSTGUG00000007747	-	99	76.098	Taeniopygia_guttata
ENSCVAG00000004658	rasd4	99	87.440	ENSTRUG00000022489	rasd4	99	87.440	Takifugu_rubripes
ENSCVAG00000004658	rasd4	99	95.169	ENSXCOG00000013226	rasd4	99	95.169	Xiphophorus_couchianus
ENSCVAG00000004658	rasd4	95	81.043	ENSXMAG00000021609	rasd4	99	81.043	Xiphophorus_maculatus