EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000004718 (Gene tree)
Gene ID
107099697
Gene Symbol
-
Alias
-
Full Name
DNA-directed RNA polymerase II subunit RPB3
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
8135 bases
Position
chrKL653398.1:4836-12970
Accession
107099697
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000003519RNA_pol_A_bacPF01000.261.7e-3711
ENSCVAP00000003519RNA_pol_LPF01193.246.7e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000009907-1948XM_015397927ENSCVAP00000003519275 (aa)XP_015253413UPI000742CD47
Gene Model
Click here to download ENSCVAG00000004718's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004718's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000004718-74100.000ENSCVAG00000017931polr2c82100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000004718-10090.182ENSG00000102978POLR2C10090.182Homo_sapiens
ENSCVAG00000004718-8730.714ENSG00000171453POLR1C9530.714Homo_sapiens
ENSCVAG00000004718-10097.818ENSAPOG00000011708polr2c10097.818Acanthochromis_polyacanthus
ENSCVAG00000004718-10090.545ENSAMEG00000017026POLR2C10090.545Ailuropoda_melanoleuca
ENSCVAG00000004718-10097.455ENSACIG00000012060polr2c10097.455Amphilophus_citrinellus
ENSCVAG00000004718-10097.818ENSAOCG00000015665polr2c10097.818Amphiprion_ocellaris
ENSCVAG00000004718-8997.561ENSAOCG00000018000-9397.561Amphiprion_ocellaris
ENSCVAG00000004718-10097.818ENSAOCG00000010477-10097.818Amphiprion_ocellaris
ENSCVAG00000004718-10097.818ENSAPEG00000007221polr2c10097.818Amphiprion_percula
ENSCVAG00000004718-10098.182ENSATEG00000007143polr2c10098.182Anabas_testudineus
ENSCVAG00000004718-9886.617ENSAPLG00000005385POLR2C9886.617Anas_platyrhynchos
ENSCVAG00000004718-8370.044ENSACAG00000011302-10070.044Anolis_carolinensis
ENSCVAG00000004718-10090.909ENSACAG00000007514-10090.909Anolis_carolinensis
ENSCVAG00000004718-10090.182ENSANAG00000005302POLR2C10090.182Aotus_nancymaae
ENSCVAG00000004718-10096.727ENSACLG00000004854polr2c10096.727Astatotilapia_calliptera
ENSCVAG00000004718-10097.455ENSAMXG00000012805polr2c10097.455Astyanax_mexicanus
ENSCVAG00000004718-10090.545ENSBTAG00000001856POLR2C10090.545Bos_taurus
ENSCVAG00000004718-9030.070ENSBTAG00000018969POLR1C8230.070Bos_taurus
ENSCVAG00000004718-9855.957WBGene00007971rpb-39855.957Caenorhabditis_elegans
ENSCVAG00000004718-10090.182ENSCJAG00000012016POLR2C10090.182Callithrix_jacchus
ENSCVAG00000004718-10090.545ENSCAFG00000008720POLR2C10090.545Canis_familiaris
ENSCVAG00000004718-10090.545ENSCAFG00020007660POLR2C10090.545Canis_lupus_dingo
ENSCVAG00000004718-9030.314ENSCHIG00000004352POLR1C8230.314Capra_hircus
ENSCVAG00000004718-10090.545ENSCHIG00000012072POLR2C10090.545Capra_hircus
ENSCVAG00000004718-10088.727ENSTSYG00000011076POLR2C10088.727Carlito_syrichta
ENSCVAG00000004718-6990.526ENSCAPG00000006608POLR2C8290.526Cavia_aperea
ENSCVAG00000004718-10090.545ENSCPOG00000004554POLR2C10090.545Cavia_porcellus
ENSCVAG00000004718-10090.182ENSCCAG00000035768POLR2C10090.182Cebus_capucinus
ENSCVAG00000004718-9030.070ENSCATG00000044045POLR1C8230.070Cercocebus_atys
ENSCVAG00000004718-10090.182ENSCATG00000040803POLR2C10090.182Cercocebus_atys
ENSCVAG00000004718-10090.545ENSCLAG00000013676POLR2C10090.545Chinchilla_lanigera
ENSCVAG00000004718-9030.070ENSCSAG00000011913POLR1C8230.070Chlorocebus_sabaeus
ENSCVAG00000004718-10090.182ENSCSAG00000004901POLR2C10090.182Chlorocebus_sabaeus
ENSCVAG00000004718-10082.909ENSCHOG00000002986POLR2C10082.909Choloepus_hoffmanni
ENSCVAG00000004718-8991.870ENSCPBG00000022758POLR2C9391.870Chrysemys_picta_bellii
ENSCVAG00000004718-5468.212ENSCING00000009812-10068.212Ciona_intestinalis
ENSCVAG00000004718-9563.958ENSCING00000021895-9963.958Ciona_intestinalis
ENSCVAG00000004718-6833.166ENSCING00000003563-5533.166Ciona_intestinalis
ENSCVAG00000004718-10068.231ENSCSAVG00000002167-10068.231Ciona_savignyi
ENSCVAG00000004718-10090.182ENSCANG00000034876POLR2C10090.182Colobus_angolensis_palliatus
ENSCVAG00000004718-10090.182ENSCGRG00001019477Polr2c10090.182Cricetulus_griseus_chok1gshd
ENSCVAG00000004718-10090.182ENSCGRG00000013273Polr2c10090.182Cricetulus_griseus_crigri
ENSCVAG00000004718-10097.455ENSCSEG00000001719polr2c10097.455Cynoglossus_semilaevis
ENSCVAG00000004718-10095.273ENSDARG00000033596polr2c10095.273Danio_rerio
ENSCVAG00000004718-10090.909ENSDNOG00000030752-8190.909Dasypus_novemcinctus
ENSCVAG00000004718-9457.634ENSDNOG00000036028-9957.634Dasypus_novemcinctus
ENSCVAG00000004718-10090.545ENSDORG00000000081Polr2c10090.545Dipodomys_ordii
ENSCVAG00000004718-9968.364FBgn0026373RpII3310068.364Drosophila_melanogaster
ENSCVAG00000004718-7631.390ENSETEG00000010807POLR1C6331.390Echinops_telfairi
ENSCVAG00000004718-10074.545ENSETEG00000004185POLR2C10074.545Echinops_telfairi
ENSCVAG00000004718-10076.000ENSEBUG00000016262polr2c10076.000Eptatretus_burgeri
ENSCVAG00000004718-10090.182ENSEASG00005005406POLR2C10090.182Equus_asinus_asinus
ENSCVAG00000004718-10090.545ENSECAG00000015818POLR2C10090.545Equus_caballus
ENSCVAG00000004718-10076.000ENSEEUG00000003658POLR2C10076.000Erinaceus_europaeus
ENSCVAG00000004718-10094.909ENSELUG00000012259polr2c10094.909Esox_lucius
ENSCVAG00000004718-10090.545ENSFCAG00000034622POLR2C10090.545Felis_catus
ENSCVAG00000004718-9030.420ENSFCAG00000009735POLR1C8230.420Felis_catus
ENSCVAG00000004718-10091.273ENSFALG00000006931POLR2C10091.273Ficedula_albicollis
ENSCVAG00000004718-10087.636ENSFDAG00000008641POLR2C10087.636Fukomys_damarensis
ENSCVAG00000004718-10099.273ENSFHEG00000020739polr2c10099.273Fundulus_heteroclitus
ENSCVAG00000004718-10096.000ENSGMOG00000004203polr2c10096.000Gadus_morhua
ENSCVAG00000004718-10091.273ENSGALG00000001168POLR2C10091.273Gallus_gallus
ENSCVAG00000004718-10099.273ENSGAFG00000021951polr2c10099.273Gambusia_affinis
ENSCVAG00000004718-10097.091ENSGACG00000002194polr2c10097.091Gasterosteus_aculeatus
ENSCVAG00000004718-8991.870ENSGAGG00000016942POLR2C8891.870Gopherus_agassizii
ENSCVAG00000004718-7631.839ENSGGOG00000010903POLR1C6431.839Gorilla_gorilla
ENSCVAG00000004718-10090.182ENSGGOG00000012415POLR2C10090.182Gorilla_gorilla
ENSCVAG00000004718-10096.727ENSHBUG00000023040polr2c10096.727Haplochromis_burtoni
ENSCVAG00000004718-10090.545ENSHGLG00000013465POLR2C10090.545Heterocephalus_glaber_female
ENSCVAG00000004718-10090.545ENSHGLG00100011949POLR2C10090.545Heterocephalus_glaber_male
ENSCVAG00000004718-10093.455ENSHCOG00000007066polr2c10093.455Hippocampus_comes
ENSCVAG00000004718-10096.727ENSIPUG00000009231polr2c10096.727Ictalurus_punctatus
ENSCVAG00000004718-10076.364ENSSTOG00000031354-10076.364Ictidomys_tridecemlineatus
ENSCVAG00000004718-10090.545ENSSTOG00000015150-10090.545Ictidomys_tridecemlineatus
ENSCVAG00000004718-10090.182ENSJJAG00000023057Polr2c10090.182Jaculus_jaculus
ENSCVAG00000004718-10098.909ENSKMAG00000016196polr2c10098.909Kryptolebias_marmoratus
ENSCVAG00000004718-10094.909ENSLBEG00000007369polr2c10094.909Labrus_bergylta
ENSCVAG00000004718-10076.087ENSLACG00000003703POLR2C9976.087Latimeria_chalumnae
ENSCVAG00000004718-7530.667ENSLOCG00000016710polr1c5630.667Lepisosteus_oculatus
ENSCVAG00000004718-10096.727ENSLOCG00000003215polr2c10096.727Lepisosteus_oculatus
ENSCVAG00000004718-10089.818ENSLAFG00000027230POLR2C10089.818Loxodonta_africana
ENSCVAG00000004718-10090.182ENSMFAG00000016861POLR2C10090.182Macaca_fascicularis
ENSCVAG00000004718-9030.070ENSMFAG00000046295POLR1C8230.070Macaca_fascicularis
ENSCVAG00000004718-10090.182ENSMMUG00000020474POLR2C10090.182Macaca_mulatta
ENSCVAG00000004718-9030.070ENSMMUG00000015192POLR1C8230.070Macaca_mulatta
ENSCVAG00000004718-9030.070ENSMNEG00000028073POLR1C8230.070Macaca_nemestrina
ENSCVAG00000004718-10090.182ENSMNEG00000033565POLR2C10090.182Macaca_nemestrina
ENSCVAG00000004718-10090.182ENSMLEG00000032412POLR2C10090.182Mandrillus_leucophaeus
ENSCVAG00000004718-9030.070ENSMLEG00000034818POLR1C8230.070Mandrillus_leucophaeus
ENSCVAG00000004718-10098.909ENSMAMG00000013205polr2c10098.909Mastacembelus_armatus
ENSCVAG00000004718-10096.727ENSMZEG00005015329polr2c10096.727Maylandia_zebra
ENSCVAG00000004718-9774.627ENSMAUG00000019031-10074.627Mesocricetus_auratus
ENSCVAG00000004718-10081.455ENSMAUG00000000779-10081.455Mesocricetus_auratus
ENSCVAG00000004718-6731.795ENSMICG00000005027POLR1C6231.795Microcebus_murinus
ENSCVAG00000004718-10090.182ENSMICG00000045178POLR2C10090.182Microcebus_murinus
ENSCVAG00000004718-10088.364ENSMOCG00000013652Polr2c10088.364Microtus_ochrogaster
ENSCVAG00000004718-10097.091ENSMMOG00000010560polr2c10097.091Mola_mola
ENSCVAG00000004718-10090.545ENSMODG00000013540POLR2C10090.545Monodelphis_domestica
ENSCVAG00000004718-10098.909ENSMALG00000004581polr2c10098.909Monopterus_albus
ENSCVAG00000004718-10090.182MGP_CAROLIEiJ_G0031409Polr2c10090.182Mus_caroli
ENSCVAG00000004718-10090.182ENSMUSG00000031783Polr2c10090.182Mus_musculus
ENSCVAG00000004718-10090.182MGP_PahariEiJ_G0023007Polr2c10090.182Mus_pahari
ENSCVAG00000004718-10090.182MGP_SPRETEiJ_G0032528Polr2c10090.182Mus_spretus
ENSCVAG00000004718-10090.545ENSMPUG00000004483POLR2C10090.545Mustela_putorius_furo
ENSCVAG00000004718-7188.144ENSMLUG00000023530-10088.144Myotis_lucifugus
ENSCVAG00000004718-10090.182ENSMLUG00000025422-10090.182Myotis_lucifugus
ENSCVAG00000004718-10090.182ENSMLUG00000015833-10090.182Myotis_lucifugus
ENSCVAG00000004718-10088.000ENSMLUG00000029495-10088.000Myotis_lucifugus
ENSCVAG00000004718-10066.909ENSNGAG00000010540-10066.909Nannospalax_galili
ENSCVAG00000004718-8730.357ENSNGAG00000023487Polr1c9530.357Nannospalax_galili
ENSCVAG00000004718-10090.545ENSNGAG00000012249-10090.545Nannospalax_galili
ENSCVAG00000004718-6596.970ENSNBRG00000003952polr2c9495.489Neolamprologus_brichardi
ENSCVAG00000004718-10077.455ENSNLEG00000003034POLR2C10077.455Nomascus_leucogenys
ENSCVAG00000004718-7631.839ENSNLEG00000004035POLR1C6431.839Nomascus_leucogenys
ENSCVAG00000004718-10084.000ENSMEUG00000014741POLR2C10084.000Notamacropus_eugenii
ENSCVAG00000004718-10085.818ENSOPRG00000006979POLR2C10085.818Ochotona_princeps
ENSCVAG00000004718-10090.545ENSODEG00000016934POLR2C10090.545Octodon_degus
ENSCVAG00000004718-10096.727ENSONIG00000010914polr2c10096.727Oreochromis_niloticus
ENSCVAG00000004718-8491.739ENSOANG00000009337POLR2C10091.739Ornithorhynchus_anatinus
ENSCVAG00000004718-10089.818ENSOCUG00000014984POLR2C10089.818Oryctolagus_cuniculus
ENSCVAG00000004718-10097.818ENSORLG00000015108polr2c10097.818Oryzias_latipes
ENSCVAG00000004718-10098.182ENSORLG00020013566polr2c10098.182Oryzias_latipes_hni
ENSCVAG00000004718-10097.818ENSORLG00015003751polr2c10097.818Oryzias_latipes_hsok
ENSCVAG00000004718-10098.545ENSOMEG00000019444polr2c10098.545Oryzias_melastigma
ENSCVAG00000004718-10090.182ENSOGAG00000016866POLR2C10090.182Otolemur_garnettii
ENSCVAG00000004718-9951.095ENSOGAG00000029610-10051.095Otolemur_garnettii
ENSCVAG00000004718-10090.545ENSOARG00000000302POLR2C10090.545Ovis_aries
ENSCVAG00000004718-10085.818ENSPPAG00000042822POLR2C10085.818Pan_paniscus
ENSCVAG00000004718-7631.839ENSPPAG00000043678POLR1C6431.839Pan_paniscus
ENSCVAG00000004718-10090.545ENSPPRG00000003215POLR2C10090.545Panthera_pardus
ENSCVAG00000004718-9030.420ENSPPRG00000009760POLR1C8230.420Panthera_pardus
ENSCVAG00000004718-9030.420ENSPTIG00000014813POLR1C8230.420Panthera_tigris_altaica
ENSCVAG00000004718-9784.586ENSPTIG00000010297POLR2C9784.586Panthera_tigris_altaica
ENSCVAG00000004718-7631.839ENSPTRG00000018202POLR1C6431.839Pan_troglodytes
ENSCVAG00000004718-10090.182ENSPTRG00000008157POLR2C10090.182Pan_troglodytes
ENSCVAG00000004718-9030.070ENSPANG00000009025POLR1C8130.070Papio_anubis
ENSCVAG00000004718-10090.182ENSPANG00000006264POLR2C10090.182Papio_anubis
ENSCVAG00000004718-10098.182ENSPKIG00000005228polr2c10098.182Paramormyrops_kingsleyae
ENSCVAG00000004718-8991.870ENSPSIG00000016112POLR2C9091.870Pelodiscus_sinensis
ENSCVAG00000004718-7595.610ENSPMGG00000021249polr2c8495.610Periophthalmus_magnuspinnatus
ENSCVAG00000004718-10090.182ENSPEMG00000014204Polr2c10090.182Peromyscus_maniculatus_bairdii
ENSCVAG00000004718-8384.649ENSPMAG00000004827polr2c10084.649Petromyzon_marinus
ENSCVAG00000004718-6831.658ENSPCIG00000028137POLR1C5231.658Phascolarctos_cinereus
ENSCVAG00000004718-10090.545ENSPCIG00000015111POLR2C10090.545Phascolarctos_cinereus
ENSCVAG00000004718-10099.273ENSPFOG00000024666polr2c10099.273Poecilia_formosa
ENSCVAG00000004718-10099.273ENSPLAG00000019750polr2c10099.273Poecilia_latipinna
ENSCVAG00000004718-10099.273ENSPMEG00000001741polr2c10099.273Poecilia_mexicana
ENSCVAG00000004718-10093.525ENSPREG00000003090polr2c10093.525Poecilia_reticulata
ENSCVAG00000004718-10090.182ENSPPYG00000007390POLR2C10090.182Pongo_abelii
ENSCVAG00000004718-8390.393ENSPCAG00000002423POLR2C10090.393Procavia_capensis
ENSCVAG00000004718-10090.182ENSPCOG00000017282POLR2C10090.182Propithecus_coquereli
ENSCVAG00000004718-10090.545ENSPVAG00000001399POLR2C10090.545Pteropus_vampyrus
ENSCVAG00000004718-10096.727ENSPNYG00000003756polr2c10096.727Pundamilia_nyererei
ENSCVAG00000004718-10097.818ENSPNAG00000012133polr2c10097.818Pygocentrus_nattereri
ENSCVAG00000004718-10090.182ENSRNOG00000015720Polr2c10090.182Rattus_norvegicus
ENSCVAG00000004718-10090.182ENSRBIG00000026549POLR2C10090.182Rhinopithecus_bieti
ENSCVAG00000004718-6732.308ENSRBIG00000007155POLR1C5832.308Rhinopithecus_bieti
ENSCVAG00000004718-6732.308ENSRROG00000000257POLR1C5832.308Rhinopithecus_roxellana
ENSCVAG00000004718-10090.182ENSRROG00000045745POLR2C10090.182Rhinopithecus_roxellana
ENSCVAG00000004718-9230.169YPR110CRPC408630.169Saccharomyces_cerevisiae
ENSCVAG00000004718-9644.074YIL021WRPB38344.074Saccharomyces_cerevisiae
ENSCVAG00000004718-7631.839ENSSBOG00000025735POLR1C7131.839Saimiri_boliviensis_boliviensis
ENSCVAG00000004718-10090.182ENSSBOG00000030004POLR2C10090.182Saimiri_boliviensis_boliviensis
ENSCVAG00000004718-10098.182ENSSFOG00015023460polr2c10098.182Scleropages_formosus
ENSCVAG00000004718-10097.091ENSSMAG00000002827polr2c8197.091Scophthalmus_maximus
ENSCVAG00000004718-10098.182ENSSDUG00000003354polr2c10098.182Seriola_dumerili
ENSCVAG00000004718-10098.182ENSSLDG00000003555polr2c10098.182Seriola_lalandi_dorsalis
ENSCVAG00000004718-5765.385ENSSARG00000001565-10065.385Sorex_araneus
ENSCVAG00000004718-10090.545ENSSPUG00000012934POLR2C10090.545Sphenodon_punctatus
ENSCVAG00000004718-10097.818ENSSPAG00000005108polr2c10097.818Stegastes_partitus
ENSCVAG00000004718-10090.182ENSSSCG00000025454POLR2C10090.182Sus_scrofa
ENSCVAG00000004718-10091.273ENSTGUG00000004996POLR2C10091.273Taeniopygia_guttata
ENSCVAG00000004718-10095.273ENSTRUG00000004676polr2c10095.273Takifugu_rubripes
ENSCVAG00000004718-10095.273ENSTNIG00000008851polr2c10095.273Tetraodon_nigroviridis
ENSCVAG00000004718-10089.091ENSTBEG00000009442POLR2C10089.091Tupaia_belangeri
ENSCVAG00000004718-8391.703ENSTTRG00000010060POLR2C10091.703Tursiops_truncatus
ENSCVAG00000004718-10090.545ENSUAMG00000014170POLR2C10090.545Ursus_americanus
ENSCVAG00000004718-9189.200ENSUMAG00000021686POLR2C9689.200Ursus_maritimus
ENSCVAG00000004718-6783.152ENSVPAG00000007590POLR2C10083.152Vicugna_pacos
ENSCVAG00000004718-5290.210ENSVVUG00000003058-9390.210Vulpes_vulpes
ENSCVAG00000004718-10084.727ENSVVUG00000023516-10084.727Vulpes_vulpes
ENSCVAG00000004718-10079.273ENSXETG00000013784polr2c10079.273Xenopus_tropicalis
ENSCVAG00000004718-10099.273ENSXCOG00000020734polr2c10099.273Xiphophorus_couchianus
ENSCVAG00000004718-10099.273ENSXMAG00000015984polr2c10099.273Xiphophorus_maculatus

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