EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004726 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4492 bases
Position: chrKL652511.1:2091512-2096003
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003526	KH_1	PF00013.29	3e-31	1	2
ENSCVAP00000003526	KH_1	PF00013.29	3e-31	2	2
ENSCVAP00000003526	KH_2	PF07650.17	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009895	-	657	-	ENSCVAP00000003526	218 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000004726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004726	zgc:110045	73	31.126	ENSCVAG00000014487	fubp1	53	31.126
ENSCVAG00000004726	zgc:110045	79	78.857	ENSCVAG00000014482	pcbp3	73	78.857
ENSCVAG00000004726	zgc:110045	89	73.846	ENSCVAG00000005262	-	80	73.846
ENSCVAG00000004726	zgc:110045	63	34.568	ENSCVAG00000006278	hnrnpk	58	34.568
ENSCVAG00000004726	zgc:110045	89	68.687	ENSCVAG00000009913	PCBP2	76	76.136
ENSCVAG00000004726	zgc:110045	79	71.098	ENSCVAG00000013090	-	57	71.098
ENSCVAG00000004726	zgc:110045	76	30.380	ENSCVAG00000008891	igf2bp3	54	30.380
ENSCVAG00000004726	zgc:110045	89	68.182	ENSCVAG00000015775	pcbp2	62	68.182
ENSCVAG00000004726	zgc:110045	78	75.000	ENSCVAG00000003674	pcbp4	74	75.000
ENSCVAG00000004726	zgc:110045	67	35.821	ENSCVAG00000014373	-	55	35.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004726	zgc:110045	89	74.112	ENSG00000183570	PCBP3	83	78.528	Homo_sapiens
ENSCVAG00000004726	zgc:110045	93	90.909	ENSAPOG00000023735	zgc:110045	94	90.909	Acanthochromis_polyacanthus
ENSCVAG00000004726	zgc:110045	93	91.262	ENSACIG00000002577	zgc:110045	95	91.262	Amphilophus_citrinellus
ENSCVAG00000004726	zgc:110045	92	96.000	ENSAOCG00000005266	zgc:110045	95	96.000	Amphiprion_ocellaris
ENSCVAG00000004726	zgc:110045	93	89.952	ENSAPEG00000000729	zgc:110045	73	89.952	Amphiprion_percula
ENSCVAG00000004726	zgc:110045	82	96.226	ENSATEG00000011191	zgc:110045	65	96.226	Anabas_testudineus
ENSCVAG00000004726	zgc:110045	93	90.431	ENSACLG00000019285	zgc:110045	73	90.431	Astatotilapia_calliptera
ENSCVAG00000004726	zgc:110045	89	74.112	ENSBTAG00000030775	PCBP3	67	82.558	Bos_taurus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCAFG00000011907	PCBP3	71	74.112	Canis_familiaris
ENSCVAG00000004726	zgc:110045	89	75.773	ENSCHIG00000015841	PCBP3	69	75.773	Capra_hircus
ENSCVAG00000004726	zgc:110045	79	81.977	ENSTSYG00000005254	PCBP3	68	81.977	Carlito_syrichta
ENSCVAG00000004726	zgc:110045	89	55.385	ENSCAPG00000006767	PCBP3	62	55.385	Cavia_aperea
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCPOG00000003648	PCBP3	71	74.112	Cavia_porcellus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCCAG00000024561	PCBP3	74	74.112	Cebus_capucinus
ENSCVAG00000004726	zgc:110045	89	74.619	ENSCATG00000038419	PCBP3	82	78.528	Cercocebus_atys
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCLAG00000006667	PCBP3	71	74.112	Chinchilla_lanigera
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCANG00000026757	PCBP3	83	78.528	Colobus_angolensis_palliatus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCGRG00001006836	Pcbp3	71	74.112	Cricetulus_griseus_chok1gshd
ENSCVAG00000004726	zgc:110045	89	74.112	ENSCGRG00000001837	Pcbp3	71	74.112	Cricetulus_griseus_crigri
ENSCVAG00000004726	zgc:110045	93	89.474	ENSCSEG00000010020	zgc:110045	98	89.474	Cynoglossus_semilaevis
ENSCVAG00000004726	zgc:110045	98	72.727	ENSDARG00000057141	zgc:110045	98	72.727	Danio_rerio
ENSCVAG00000004726	zgc:110045	89	74.112	ENSDNOG00000049518	PCBP3	69	74.112	Dasypus_novemcinctus
ENSCVAG00000004726	zgc:110045	79	81.609	ENSDORG00000003640	Pcbp3	70	81.609	Dipodomys_ordii
ENSCVAG00000004726	zgc:110045	79	77.714	ENSEBUG00000009697	zgc:110045	79	79.245	Eptatretus_burgeri
ENSCVAG00000004726	zgc:110045	89	74.112	ENSEASG00005007068	PCBP3	73	74.112	Equus_asinus_asinus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSECAG00000012413	PCBP3	73	74.112	Equus_caballus
ENSCVAG00000004726	zgc:110045	99	79.091	ENSELUG00000019784	zgc:110045	58	78.082	Esox_lucius
ENSCVAG00000004726	zgc:110045	89	74.112	ENSFCAG00000014812	PCBP3	73	74.112	Felis_catus
ENSCVAG00000004726	zgc:110045	89	74.874	ENSFDAG00000009117	PCBP3	73	74.874	Fukomys_damarensis
ENSCVAG00000004726	zgc:110045	93	93.659	ENSFHEG00000018838	-	94	93.659	Fundulus_heteroclitus
ENSCVAG00000004726	zgc:110045	86	88.021	ENSGMOG00000005953	zgc:110045	58	88.021	Gadus_morhua
ENSCVAG00000004726	zgc:110045	93	91.866	ENSGAFG00000017864	zgc:110045	92	91.866	Gambusia_affinis
ENSCVAG00000004726	zgc:110045	92	87.923	ENSGACG00000003044	zgc:110045	94	87.923	Gasterosteus_aculeatus
ENSCVAG00000004726	zgc:110045	89	74.619	ENSGGOG00000003683	PCBP3	83	78.528	Gorilla_gorilla
ENSCVAG00000004726	zgc:110045	93	90.431	ENSHBUG00000012495	zgc:110045	94	90.431	Haplochromis_burtoni
ENSCVAG00000004726	zgc:110045	89	75.773	ENSHGLG00000018620	PCBP3	71	75.773	Heterocephalus_glaber_female
ENSCVAG00000004726	zgc:110045	89	75.773	ENSHGLG00100013590	PCBP3	71	75.773	Heterocephalus_glaber_male
ENSCVAG00000004726	zgc:110045	93	86.957	ENSHCOG00000000818	zgc:110045	95	86.957	Hippocampus_comes
ENSCVAG00000004726	zgc:110045	92	73.684	ENSIPUG00000003932	zgc:110045	77	73.684	Ictalurus_punctatus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSSTOG00000007178	PCBP3	71	74.112	Ictidomys_tridecemlineatus
ENSCVAG00000004726	zgc:110045	89	75.897	ENSJJAG00000021192	Pcbp3	69	74.112	Jaculus_jaculus
ENSCVAG00000004726	zgc:110045	89	91.919	ENSKMAG00000016179	-	97	91.919	Kryptolebias_marmoratus
ENSCVAG00000004726	zgc:110045	99	86.758	ENSLBEG00000023074	zgc:110045	87	87.692	Labrus_bergylta
ENSCVAG00000004726	zgc:110045	89	75.000	ENSLAFG00000020835	PCBP3	78	75.000	Loxodonta_africana
ENSCVAG00000004726	zgc:110045	89	74.619	ENSMFAG00000034574	PCBP3	83	78.528	Macaca_fascicularis
ENSCVAG00000004726	zgc:110045	89	74.112	ENSMMUG00000003825	PCBP3	83	78.528	Macaca_mulatta
ENSCVAG00000004726	zgc:110045	89	74.619	ENSMNEG00000035551	PCBP3	83	78.528	Macaca_nemestrina
ENSCVAG00000004726	zgc:110045	89	74.619	ENSMLEG00000038785	PCBP3	83	78.528	Mandrillus_leucophaeus
ENSCVAG00000004726	zgc:110045	93	88.995	ENSMAMG00000014389	zgc:110045	66	88.995	Mastacembelus_armatus
ENSCVAG00000004726	zgc:110045	93	90.431	ENSMZEG00005011785	zgc:110045	73	90.431	Maylandia_zebra
ENSCVAG00000004726	zgc:110045	89	75.258	ENSMAUG00000007036	Pcbp3	71	74.112	Mesocricetus_auratus
ENSCVAG00000004726	zgc:110045	89	73.604	ENSMICG00000012679	PCBP3	83	77.914	Microcebus_murinus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSMOCG00000016127	Pcbp3	71	74.112	Microtus_ochrogaster
ENSCVAG00000004726	zgc:110045	92	90.500	ENSMMOG00000008399	zgc:110045	96	90.500	Mola_mola
ENSCVAG00000004726	zgc:110045	90	90.306	ENSMALG00000008763	zgc:110045	96	90.306	Monopterus_albus
ENSCVAG00000004726	zgc:110045	94	70.813	MGP_CAROLIEiJ_G0015475	Pcbp3	92	70.813	Mus_caroli
ENSCVAG00000004726	zgc:110045	94	70.813	ENSMUSG00000001120	Pcbp3	92	70.813	Mus_musculus
ENSCVAG00000004726	zgc:110045	94	70.813	MGP_PahariEiJ_G0030889	Pcbp3	92	70.813	Mus_pahari
ENSCVAG00000004726	zgc:110045	94	70.813	MGP_SPRETEiJ_G0016288	Pcbp3	92	70.813	Mus_spretus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSMLUG00000003074	PCBP3	78	74.112	Myotis_lucifugus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSNGAG00000005416	Pcbp3	71	74.112	Nannospalax_galili
ENSCVAG00000004726	zgc:110045	93	90.431	ENSNBRG00000017646	zgc:110045	73	90.431	Neolamprologus_brichardi
ENSCVAG00000004726	zgc:110045	89	74.112	ENSNLEG00000002639	PCBP3	83	78.528	Nomascus_leucogenys
ENSCVAG00000004726	zgc:110045	89	75.258	ENSODEG00000012873	PCBP3	71	75.258	Octodon_degus
ENSCVAG00000004726	zgc:110045	93	90.431	ENSONIG00000010370	zgc:110045	77	90.431	Oreochromis_niloticus
ENSCVAG00000004726	zgc:110045	79	80.571	ENSOANG00000006265	PCBP3	62	80.571	Ornithorhynchus_anatinus
ENSCVAG00000004726	zgc:110045	93	91.262	ENSORLG00020003139	zgc:110045	86	91.262	Oryzias_latipes_hni
ENSCVAG00000004726	zgc:110045	89	69.543	ENSOARG00000012704	PCBP3	70	69.543	Ovis_aries
ENSCVAG00000004726	zgc:110045	89	74.112	ENSPPAG00000021940	PCBP3	83	78.528	Pan_paniscus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSPPRG00000003933	PCBP3	73	74.112	Panthera_pardus
ENSCVAG00000004726	zgc:110045	91	52.970	ENSPTIG00000012038	PCBP3	73	53.769	Panthera_tigris_altaica
ENSCVAG00000004726	zgc:110045	90	45.854	ENSPTRG00000014010	PCBP3	75	45.854	Pan_troglodytes
ENSCVAG00000004726	zgc:110045	89	74.619	ENSPANG00000023631	PCBP3	83	78.528	Papio_anubis
ENSCVAG00000004726	zgc:110045	92	58.128	ENSPMGG00000022531	-	92	58.128	Periophthalmus_magnuspinnatus
ENSCVAG00000004726	zgc:110045	93	71.154	ENSPEMG00000000587	Pcbp3	75	71.154	Peromyscus_maniculatus_bairdii
ENSCVAG00000004726	zgc:110045	67	64.167	ENSPMAG00000004719	zgc:110045	93	64.167	Petromyzon_marinus
ENSCVAG00000004726	zgc:110045	92	91.748	ENSPFOG00000002348	zgc:110045	93	91.748	Poecilia_formosa
ENSCVAG00000004726	zgc:110045	93	92.718	ENSPLAG00000017488	zgc:110045	92	92.718	Poecilia_latipinna
ENSCVAG00000004726	zgc:110045	98	88.479	ENSPMEG00000012762	zgc:110045	92	91.866	Poecilia_mexicana
ENSCVAG00000004726	zgc:110045	93	91.388	ENSPREG00000001797	zgc:110045	92	91.388	Poecilia_reticulata
ENSCVAG00000004726	zgc:110045	82	74.860	ENSPPYG00000011525	-	65	74.860	Pongo_abelii
ENSCVAG00000004726	zgc:110045	78	63.793	ENSPCAG00000001454	PCBP3	50	63.793	Procavia_capensis
ENSCVAG00000004726	zgc:110045	89	73.604	ENSPCOG00000013797	PCBP3	83	77.914	Propithecus_coquereli
ENSCVAG00000004726	zgc:110045	93	91.262	ENSPNYG00000004637	zgc:110045	95	91.262	Pundamilia_nyererei
ENSCVAG00000004726	zgc:110045	98	71.818	ENSPNAG00000004501	zgc:110045	98	71.818	Pygocentrus_nattereri
ENSCVAG00000004726	zgc:110045	89	74.112	ENSRROG00000034567	PCBP3	83	78.528	Rhinopithecus_roxellana
ENSCVAG00000004726	zgc:110045	89	74.619	ENSSBOG00000005789	PCBP3	83	78.528	Saimiri_boliviensis_boliviensis
ENSCVAG00000004726	zgc:110045	93	89.952	ENSSMAG00000013541	zgc:110045	88	89.952	Scophthalmus_maximus
ENSCVAG00000004726	zgc:110045	87	93.333	ENSSDUG00000019371	zgc:110045	66	93.333	Seriola_dumerili
ENSCVAG00000004726	zgc:110045	93	90.431	ENSSLDG00000021064	zgc:110045	73	90.431	Seriola_lalandi_dorsalis
ENSCVAG00000004726	zgc:110045	63	78.832	ENSSARG00000007629	-	68	78.832	Sorex_araneus
ENSCVAG00000004726	zgc:110045	93	90.909	ENSSPAG00000000563	zgc:110045	94	90.909	Stegastes_partitus
ENSCVAG00000004726	zgc:110045	89	74.112	ENSSSCG00000023041	PCBP3	74	74.112	Sus_scrofa
ENSCVAG00000004726	zgc:110045	90	87.437	ENSTRUG00000017789	zgc:110045	98	87.437	Takifugu_rubripes
ENSCVAG00000004726	zgc:110045	85	84.456	ENSTNIG00000003546	zgc:110045	95	84.456	Tetraodon_nigroviridis
ENSCVAG00000004726	zgc:110045	89	56.345	ENSTBEG00000011882	-	61	56.853	Tupaia_belangeri
ENSCVAG00000004726	zgc:110045	89	75.258	ENSUAMG00000006491	PCBP3	92	81.679	Ursus_americanus
ENSCVAG00000004726	zgc:110045	85	71.649	ENSUMAG00000025403	PCBP3	72	71.649	Ursus_maritimus
ENSCVAG00000004726	zgc:110045	89	70.103	ENSVVUG00000023862	PCBP3	50	76.163	Vulpes_vulpes
ENSCVAG00000004726	zgc:110045	77	95.238	ENSXCOG00000005968	zgc:110045	87	95.238	Xiphophorus_couchianus
ENSCVAG00000004726	zgc:110045	93	91.866	ENSXMAG00000008030	zgc:110045	71	91.866	Xiphophorus_maculatus