EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000004836 (Gene tree)
Gene ID: 107099694
Gene Symbol: mrps18b
Alias: wu:fj45h02|zgc:112517
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11160 bases
Position: chrKL653397.1:91573-102732
Accession: 107099694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003635	Ribosomal_S18	PF01084.20	7.4e-15	1	1
ENSCVAP00000022260	Ribosomal_S18	PF01084.20	7.4e-15	1	1
ENSCVAP00000022271	Ribosomal_S18	PF01084.20	7.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009720	-	1617	XM_015397922	ENSCVAP00000022260	251 (aa)	XP_015253408	UPI0007427FEF
ENSCVAT00000009703	-	1617	-	ENSCVAP00000003635	251 (aa)	-	UPI0007427FEF
ENSCVAT00000009708	-	1617	-	ENSCVAP00000022271	251 (aa)	-	UPI0007427FEF

Gene Model

Click here to download ENSCVAG00000004836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004836	mrps18b	74	51.064	ENSG00000204568	MRPS18B	73	51.064	Homo_sapiens
ENSCVAG00000004836	mrps18b	91	67.241	ENSAPOG00000003719	mrps18b	91	67.241	Acanthochromis_polyacanthus
ENSCVAG00000004836	mrps18b	69	56.571	ENSAMEG00000013279	MRPS18B	68	56.571	Ailuropoda_melanoleuca
ENSCVAG00000004836	mrps18b	99	67.063	ENSACIG00000013156	mrps18b	100	67.063	Amphilophus_citrinellus
ENSCVAG00000004836	mrps18b	99	64.567	ENSAOCG00000008569	mrps18b	100	64.567	Amphiprion_ocellaris
ENSCVAG00000004836	mrps18b	99	64.961	ENSAPEG00000008204	mrps18b	100	64.961	Amphiprion_percula
ENSCVAG00000004836	mrps18b	99	63.813	ENSATEG00000012949	mrps18b	100	63.813	Anabas_testudineus
ENSCVAG00000004836	mrps18b	69	58.523	ENSACAG00000010755	MRPS18B	83	58.523	Anolis_carolinensis
ENSCVAG00000004836	mrps18b	69	53.714	ENSANAG00000021210	MRPS18B	68	53.714	Aotus_nancymaae
ENSCVAG00000004836	mrps18b	64	64.417	ENSACLG00000004576	-	80	64.417	Astatotilapia_calliptera
ENSCVAG00000004836	mrps18b	90	70.742	ENSACLG00000015409	mrps18b	91	70.742	Astatotilapia_calliptera
ENSCVAG00000004836	mrps18b	94	57.438	ENSAMXG00000034123	mrps18b	98	57.438	Astyanax_mexicanus
ENSCVAG00000004836	mrps18b	69	55.429	ENSBTAG00000006936	MRPS18B	68	55.429	Bos_taurus
ENSCVAG00000004836	mrps18b	69	52.000	ENSCJAG00000019949	MRPS18B	68	52.000	Callithrix_jacchus
ENSCVAG00000004836	mrps18b	69	54.857	ENSCAFG00000000411	MRPS18B	68	54.857	Canis_familiaris
ENSCVAG00000004836	mrps18b	69	54.857	ENSCAFG00020017573	MRPS18B	68	54.857	Canis_lupus_dingo
ENSCVAG00000004836	mrps18b	69	55.429	ENSCHIG00000021770	MRPS18B	68	55.429	Capra_hircus
ENSCVAG00000004836	mrps18b	69	55.429	ENSTSYG00000003333	MRPS18B	69	55.429	Carlito_syrichta
ENSCVAG00000004836	mrps18b	80	48.768	ENSCAPG00000000098	MRPS18B	78	48.768	Cavia_aperea
ENSCVAG00000004836	mrps18b	80	48.768	ENSCPOG00000015405	MRPS18B	77	48.768	Cavia_porcellus
ENSCVAG00000004836	mrps18b	69	53.714	ENSCCAG00000037423	MRPS18B	68	53.714	Cebus_capucinus
ENSCVAG00000004836	mrps18b	69	54.857	ENSCATG00000040250	MRPS18B	68	54.857	Cercocebus_atys
ENSCVAG00000004836	mrps18b	69	53.714	ENSCLAG00000003282	MRPS18B	69	53.714	Chinchilla_lanigera
ENSCVAG00000004836	mrps18b	69	54.286	ENSCSAG00000018793	-	68	54.286	Chlorocebus_sabaeus
ENSCVAG00000004836	mrps18b	75	51.309	ENSCHOG00000005581	MRPS18B	74	51.309	Choloepus_hoffmanni
ENSCVAG00000004836	mrps18b	69	58.523	ENSCPBG00000018833	MRPS18B	91	50.000	Chrysemys_picta_bellii
ENSCVAG00000004836	mrps18b	52	36.641	ENSCING00000014510	-	51	36.641	Ciona_intestinalis
ENSCVAG00000004836	mrps18b	69	54.286	ENSCANG00000043568	MRPS18B	68	54.286	Colobus_angolensis_palliatus
ENSCVAG00000004836	mrps18b	69	54.023	ENSCGRG00001018086	Mrps18b	69	54.023	Cricetulus_griseus_chok1gshd
ENSCVAG00000004836	mrps18b	69	54.023	ENSCGRG00000013676	Mrps18b	69	54.023	Cricetulus_griseus_crigri
ENSCVAG00000004836	mrps18b	99	57.937	ENSCSEG00000018717	mrps18b	100	57.937	Cynoglossus_semilaevis
ENSCVAG00000004836	mrps18b	88	58.744	ENSDARG00000007065	mrps18b	89	58.744	Danio_rerio
ENSCVAG00000004836	mrps18b	84	46.479	ENSDNOG00000032393	MRPS18B	80	46.479	Dasypus_novemcinctus
ENSCVAG00000004836	mrps18b	69	47.126	ENSETEG00000003113	MRPS18B	68	47.126	Echinops_telfairi
ENSCVAG00000004836	mrps18b	86	47.489	ENSEBUG00000003724	mrps18b	80	47.489	Eptatretus_burgeri
ENSCVAG00000004836	mrps18b	69	55.429	ENSEASG00005018922	MRPS18B	68	55.429	Equus_asinus_asinus
ENSCVAG00000004836	mrps18b	69	54.286	ENSECAG00000022485	MRPS18B	68	54.286	Equus_caballus
ENSCVAG00000004836	mrps18b	69	55.429	ENSEEUG00000010352	MRPS18B	68	55.429	Erinaceus_europaeus
ENSCVAG00000004836	mrps18b	99	62.302	ENSELUG00000023727	mrps18b	96	62.302	Esox_lucius
ENSCVAG00000004836	mrps18b	69	55.429	ENSFCAG00000007686	MRPS18B	68	55.429	Felis_catus
ENSCVAG00000004836	mrps18b	69	53.714	ENSFDAG00000012231	MRPS18B	72	53.714	Fukomys_damarensis
ENSCVAG00000004836	mrps18b	99	75.794	ENSFHEG00000017861	mrps18b	99	75.794	Fundulus_heteroclitus
ENSCVAG00000004836	mrps18b	71	74.033	ENSGMOG00000013271	mrps18b	95	74.033	Gadus_morhua
ENSCVAG00000004836	mrps18b	75	75.000	ENSGAFG00000009051	mrps18b	85	75.000	Gambusia_affinis
ENSCVAG00000004836	mrps18b	69	74.432	ENSGACG00000001379	mrps18b	96	71.958	Gasterosteus_aculeatus
ENSCVAG00000004836	mrps18b	74	47.340	ENSGGOG00000011317	MRPS18B	72	47.340	Gorilla_gorilla
ENSCVAG00000004836	mrps18b	90	71.179	ENSHBUG00000008445	mrps18b	91	71.179	Haplochromis_burtoni
ENSCVAG00000004836	mrps18b	72	58.242	ENSHBUG00000010723	-	73	58.242	Haplochromis_burtoni
ENSCVAG00000004836	mrps18b	70	51.685	ENSHGLG00000019371	MRPS18B	70	51.685	Heterocephalus_glaber_female
ENSCVAG00000004836	mrps18b	70	51.685	ENSHGLG00100010530	MRPS18B	68	51.685	Heterocephalus_glaber_male
ENSCVAG00000004836	mrps18b	79	73.134	ENSHCOG00000007012	mrps18b	81	73.134	Hippocampus_comes
ENSCVAG00000004836	mrps18b	80	67.157	ENSIPUG00000013958	mrps18b	84	67.157	Ictalurus_punctatus
ENSCVAG00000004836	mrps18b	77	51.282	ENSSTOG00000011853	MRPS18B	82	51.282	Ictidomys_tridecemlineatus
ENSCVAG00000004836	mrps18b	69	54.598	ENSJJAG00000003794	Mrps18b	70	54.598	Jaculus_jaculus
ENSCVAG00000004836	mrps18b	99	66.667	ENSKMAG00000003449	mrps18b	93	66.667	Kryptolebias_marmoratus
ENSCVAG00000004836	mrps18b	99	57.708	ENSLBEG00000012943	mrps18b	100	57.708	Labrus_bergylta
ENSCVAG00000004836	mrps18b	75	60.000	ENSLACG00000004722	MRPS18B	79	60.000	Latimeria_chalumnae
ENSCVAG00000004836	mrps18b	69	53.409	ENSLAFG00000017285	MRPS18B	68	53.409	Loxodonta_africana
ENSCVAG00000004836	mrps18b	69	54.857	ENSMFAG00000003966	MRPS18B	68	54.857	Macaca_fascicularis
ENSCVAG00000004836	mrps18b	69	54.857	ENSMMUG00000006525	MRPS18B	68	54.857	Macaca_mulatta
ENSCVAG00000004836	mrps18b	69	54.857	ENSMNEG00000045059	MRPS18B	68	54.857	Macaca_nemestrina
ENSCVAG00000004836	mrps18b	69	50.286	ENSMLEG00000033833	MRPS18B	67	50.286	Mandrillus_leucophaeus
ENSCVAG00000004836	mrps18b	99	62.451	ENSMAMG00000020243	mrps18b	100	62.451	Mastacembelus_armatus
ENSCVAG00000004836	mrps18b	72	60.989	ENSMZEG00005019697	-	81	60.989	Maylandia_zebra
ENSCVAG00000004836	mrps18b	90	70.742	ENSMZEG00005017910	mrps18b	91	70.742	Maylandia_zebra
ENSCVAG00000004836	mrps18b	69	55.172	ENSMAUG00000019160	Mrps18b	69	55.172	Mesocricetus_auratus
ENSCVAG00000004836	mrps18b	77	50.256	ENSMICG00000031536	MRPS18B	74	50.256	Microcebus_murinus
ENSCVAG00000004836	mrps18b	69	54.023	ENSMOCG00000013273	Mrps18b	69	54.023	Microtus_ochrogaster
ENSCVAG00000004836	mrps18b	73	74.595	ENSMMOG00000012076	mrps18b	78	74.595	Mola_mola
ENSCVAG00000004836	mrps18b	78	52.000	ENSMODG00000015933	MRPS18B	83	52.000	Monodelphis_domestica
ENSCVAG00000004836	mrps18b	99	63.889	ENSMALG00000019456	mrps18b	98	63.889	Monopterus_albus
ENSCVAG00000004836	mrps18b	73	51.087	MGP_CAROLIEiJ_G0021541	Mrps18b	72	51.087	Mus_caroli
ENSCVAG00000004836	mrps18b	73	51.087	ENSMUSG00000024436	Mrps18b	72	51.087	Mus_musculus
ENSCVAG00000004836	mrps18b	69	54.023	MGP_PahariEiJ_G0020535	Mrps18b	69	54.023	Mus_pahari
ENSCVAG00000004836	mrps18b	69	52.299	MGP_SPRETEiJ_G0022448	Mrps18b	72	57.037	Mus_spretus
ENSCVAG00000004836	mrps18b	69	55.429	ENSMPUG00000011739	MRPS18B	68	55.429	Mustela_putorius_furo
ENSCVAG00000004836	mrps18b	69	56.000	ENSMLUG00000008850	MRPS18B	69	56.000	Myotis_lucifugus
ENSCVAG00000004836	mrps18b	69	55.172	ENSNGAG00000017874	Mrps18b	72	55.172	Nannospalax_galili
ENSCVAG00000004836	mrps18b	62	62.420	ENSNBRG00000020716	-	85	62.420	Neolamprologus_brichardi
ENSCVAG00000004836	mrps18b	69	54.286	ENSNLEG00000005224	MRPS18B	68	54.286	Nomascus_leucogenys
ENSCVAG00000004836	mrps18b	78	50.249	ENSMEUG00000012457	MRPS18B	84	50.249	Notamacropus_eugenii
ENSCVAG00000004836	mrps18b	99	66.667	ENSONIG00000015945	mrps18b	100	66.667	Oreochromis_niloticus
ENSCVAG00000004836	mrps18b	69	56.571	ENSOCUG00000002149	MRPS18B	70	56.571	Oryctolagus_cuniculus
ENSCVAG00000004836	mrps18b	77	72.727	ENSORLG00000010546	mrps18b	86	72.727	Oryzias_latipes
ENSCVAG00000004836	mrps18b	77	73.232	ENSORLG00020018506	mrps18b	82	73.232	Oryzias_latipes_hni
ENSCVAG00000004836	mrps18b	77	74.242	ENSORLG00015010248	mrps18b	81	74.242	Oryzias_latipes_hsok
ENSCVAG00000004836	mrps18b	99	61.660	ENSOMEG00000008194	mrps18b	99	61.660	Oryzias_melastigma
ENSCVAG00000004836	mrps18b	69	54.857	ENSOGAG00000004435	MRPS18B	68	54.857	Otolemur_garnettii
ENSCVAG00000004836	mrps18b	69	55.429	ENSOARG00000012647	MRPS18B	68	55.429	Ovis_aries
ENSCVAG00000004836	mrps18b	74	50.000	ENSPPAG00000018246	-	73	50.000	Pan_paniscus
ENSCVAG00000004836	mrps18b	74	51.064	ENSPPAG00000039692	-	73	51.064	Pan_paniscus
ENSCVAG00000004836	mrps18b	69	56.000	ENSPPRG00000003538	MRPS18B	68	56.000	Panthera_pardus
ENSCVAG00000004836	mrps18b	69	56.000	ENSPTIG00000016443	MRPS18B	68	56.000	Panthera_tigris_altaica
ENSCVAG00000004836	mrps18b	74	51.064	ENSPTRG00000017932	MRPS18B	73	51.064	Pan_troglodytes
ENSCVAG00000004836	mrps18b	69	54.286	ENSPANG00000017647	MRPS18B	68	54.286	Papio_anubis
ENSCVAG00000004836	mrps18b	99	59.608	ENSPKIG00000011007	mrps18b	100	59.608	Paramormyrops_kingsleyae
ENSCVAG00000004836	mrps18b	69	59.659	ENSPSIG00000011533	MRPS18B	76	58.242	Pelodiscus_sinensis
ENSCVAG00000004836	mrps18b	99	60.714	ENSPMGG00000020546	mrps18b	100	60.714	Periophthalmus_magnuspinnatus
ENSCVAG00000004836	mrps18b	69	52.874	ENSPEMG00000001695	Mrps18b	74	52.874	Peromyscus_maniculatus_bairdii
ENSCVAG00000004836	mrps18b	86	48.430	ENSPMAG00000001665	mrps18b	90	48.430	Petromyzon_marinus
ENSCVAG00000004836	mrps18b	78	49.000	ENSPCIG00000014983	MRPS18B	74	49.000	Phascolarctos_cinereus
ENSCVAG00000004836	mrps18b	99	74.206	ENSPFOG00000016437	mrps18b	87	74.206	Poecilia_formosa
ENSCVAG00000004836	mrps18b	99	74.704	ENSPLAG00000002566	mrps18b	99	74.704	Poecilia_latipinna
ENSCVAG00000004836	mrps18b	99	75.000	ENSPMEG00000010978	mrps18b	86	75.000	Poecilia_mexicana
ENSCVAG00000004836	mrps18b	93	74.153	ENSPREG00000012186	mrps18b	84	74.153	Poecilia_reticulata
ENSCVAG00000004836	mrps18b	69	48.571	ENSPPYG00000016412	MRPS18B	65	48.571	Pongo_abelii
ENSCVAG00000004836	mrps18b	69	56.000	ENSPCAG00000017028	MRPS18B	68	56.000	Procavia_capensis
ENSCVAG00000004836	mrps18b	69	47.701	ENSPCOG00000015431	MRPS18B	66	47.701	Propithecus_coquereli
ENSCVAG00000004836	mrps18b	69	57.143	ENSPVAG00000003981	MRPS18B	68	57.143	Pteropus_vampyrus
ENSCVAG00000004836	mrps18b	88	71.171	ENSPNYG00000011383	mrps18b	89	71.171	Pundamilia_nyererei
ENSCVAG00000004836	mrps18b	65	58.824	ENSPNYG00000004553	-	83	58.824	Pundamilia_nyererei
ENSCVAG00000004836	mrps18b	80	68.627	ENSPNAG00000029858	mrps18b	84	68.627	Pygocentrus_nattereri
ENSCVAG00000004836	mrps18b	73	51.087	ENSRNOG00000000804	Mrps18b	79	46.099	Rattus_norvegicus
ENSCVAG00000004836	mrps18b	69	54.857	ENSRBIG00000037128	MRPS18B	68	54.857	Rhinopithecus_bieti
ENSCVAG00000004836	mrps18b	69	54.857	ENSRROG00000017497	MRPS18B	68	54.857	Rhinopithecus_roxellana
ENSCVAG00000004836	mrps18b	69	53.143	ENSSBOG00000023414	MRPS18B	70	53.801	Saimiri_boliviensis_boliviensis
ENSCVAG00000004836	mrps18b	75	48.677	ENSSHAG00000006769	MRPS18B	76	48.677	Sarcophilus_harrisii
ENSCVAG00000004836	mrps18b	88	60.889	ENSSFOG00015015664	mrps18b	88	60.889	Scleropages_formosus
ENSCVAG00000004836	mrps18b	90	68.122	ENSSMAG00000020784	mrps18b	91	68.122	Scophthalmus_maximus
ENSCVAG00000004836	mrps18b	90	68.103	ENSSDUG00000009519	mrps18b	91	68.103	Seriola_dumerili
ENSCVAG00000004836	mrps18b	81	65.581	ENSSLDG00000000473	mrps18b	75	65.581	Seriola_lalandi_dorsalis
ENSCVAG00000004836	mrps18b	75	53.368	ENSSPUG00000015230	MRPS18B	78	53.368	Sphenodon_punctatus
ENSCVAG00000004836	mrps18b	99	61.111	ENSSPAG00000004508	mrps18b	100	62.205	Stegastes_partitus
ENSCVAG00000004836	mrps18b	69	55.429	ENSSSCG00000029425	MRPS18B	68	55.429	Sus_scrofa
ENSCVAG00000004836	mrps18b	77	72.680	ENSTRUG00000022309	mrps18b	68	72.680	Takifugu_rubripes
ENSCVAG00000004836	mrps18b	69	57.714	ENSTTRG00000008313	MRPS18B	68	57.714	Tursiops_truncatus
ENSCVAG00000004836	mrps18b	69	56.000	ENSUAMG00000005833	MRPS18B	68	56.000	Ursus_americanus
ENSCVAG00000004836	mrps18b	69	56.000	ENSUMAG00000019652	MRPS18B	52	56.000	Ursus_maritimus
ENSCVAG00000004836	mrps18b	61	57.143	ENSVPAG00000001181	MRPS18B	80	57.143	Vicugna_pacos
ENSCVAG00000004836	mrps18b	69	54.857	ENSVVUG00000009631	MRPS18B	68	54.857	Vulpes_vulpes
ENSCVAG00000004836	mrps18b	76	57.812	ENSXETG00000032503	MRPS18B	85	57.812	Xenopus_tropicalis
ENSCVAG00000004836	mrps18b	80	81.863	ENSXCOG00000003011	mrps18b	99	83.824	Xiphophorus_couchianus
ENSCVAG00000004836	mrps18b	99	76.587	ENSXMAG00000016698	mrps18b	99	78.175	Xiphophorus_maculatus