EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004909 (Gene tree)
Gene ID: 107086548
Gene Symbol: cpeb1b
Alias: cepb1b|fd15c06|wu:fd15c06|zorba
Full Name: cytoplasmic polyadenylation element binding protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10554 bases
Position: chrKL652656.1:927863-938416
Accession: 107086548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022299	RRM_1	PF00076.22	5.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009638	-	1491	XM_015377548	ENSCVAP00000022299	496 (aa)	XP_015233034	-

Gene Model

Click here to download ENSCVAG00000004909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004909	cpeb1b	62	39.623	ENSCVAG00000013200	cpeb2	68	39.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004909	cpeb1b	98	64.476	ENSAMXG00000014189	cpeb1a	87	63.299	Astyanax_mexicanus
ENSCVAG00000004909	cpeb1b	57	60.211	FBgn0004882	orb	50	60.211	Drosophila_melanogaster
ENSCVAG00000004909	cpeb1b	77	43.523	ENSEBUG00000008914	-	75	43.514	Eptatretus_burgeri
ENSCVAG00000004909	cpeb1b	100	91.800	ENSKMAG00000001929	cpeb1b	88	92.200	Kryptolebias_marmoratus
ENSCVAG00000004909	cpeb1b	98	66.667	ENSPNAG00000004246	cpeb1a	86	65.644	Pygocentrus_nattereri