EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000004930 (Gene tree)
Gene ID: 107098416
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10964 bases
Position: chrKL653275.1:141838-152801
Accession: 107098416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003705	zf-C2H2	PF00096.26	1.4e-23	1	5
ENSCVAP00000003705	zf-C2H2	PF00096.26	1.4e-23	2	5
ENSCVAP00000003705	zf-C2H2	PF00096.26	1.4e-23	3	5
ENSCVAP00000003705	zf-C2H2	PF00096.26	1.4e-23	4	5
ENSCVAP00000003705	zf-C2H2	PF00096.26	1.4e-23	5	5
ENSCVAP00000003705	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009584	GFI1 (1 of many)-201	1194	XM_015396088	ENSCVAP00000003705	397 (aa)	XP_015251574	UPI000742A470

Gene Model

Click here to download ENSCVAG00000004930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000004930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000004930	GFI1	51	40.964	ENSCVAG00000003514	-	77	41.566
ENSCVAG00000004930	GFI1	51	41.549	ENSCVAG00000021225	-	97	50.000
ENSCVAG00000004930	GFI1	62	39.655	ENSCVAG00000022174	-	58	39.655
ENSCVAG00000004930	GFI1	65	44.776	ENSCVAG00000016862	-	91	44.785
ENSCVAG00000004930	GFI1	60	45.000	ENSCVAG00000009752	-	60	45.000
ENSCVAG00000004930	GFI1	54	45.070	ENSCVAG00000008535	-	67	45.070
ENSCVAG00000004930	GFI1	64	43.243	ENSCVAG00000014404	-	94	43.243
ENSCVAG00000004930	GFI1	65	41.860	ENSCVAG00000002500	-	99	41.860
ENSCVAG00000004930	GFI1	51	42.568	ENSCVAG00000006460	-	69	42.568
ENSCVAG00000004930	GFI1	51	44.785	ENSCVAG00000008200	-	89	44.785
ENSCVAG00000004930	GFI1	51	42.169	ENSCVAG00000012248	-	87	42.169
ENSCVAG00000004930	GFI1	53	43.846	ENSCVAG00000006491	-	81	43.846
ENSCVAG00000004930	GFI1	51	48.305	ENSCVAG00000012543	-	99	43.976
ENSCVAG00000004930	GFI1	51	44.681	ENSCVAG00000002242	-	93	44.681
ENSCVAG00000004930	GFI1	62	40.237	ENSCVAG00000016092	-	74	40.237
ENSCVAG00000004930	GFI1	64	45.399	ENSCVAG00000012180	-	97	44.643
ENSCVAG00000004930	GFI1	90	44.311	ENSCVAG00000010160	-	78	44.311
ENSCVAG00000004930	GFI1	65	47.500	ENSCVAG00000007051	-	98	47.500
ENSCVAG00000004930	GFI1	66	45.860	ENSCVAG00000010442	-	99	45.399
ENSCVAG00000004930	GFI1	73	43.119	ENSCVAG00000003250	-	63	43.119
ENSCVAG00000004930	GFI1	50	46.429	ENSCVAG00000002833	-	65	46.429
ENSCVAG00000004930	GFI1	51	42.697	ENSCVAG00000014322	-	72	42.697
ENSCVAG00000004930	GFI1	100	60.244	ENSCVAG00000011828	gfi1ab	100	58.824
ENSCVAG00000004930	GFI1	65	42.604	ENSCVAG00000012284	-	79	42.604
ENSCVAG00000004930	GFI1	62	40.936	ENSCVAG00000004958	-	87	40.936
ENSCVAG00000004930	GFI1	51	43.452	ENSCVAG00000022991	-	97	40.476
ENSCVAG00000004930	GFI1	53	43.636	ENSCVAG00000014734	-	91	43.636
ENSCVAG00000004930	GFI1	51	46.429	ENSCVAG00000015153	-	73	46.429
ENSCVAG00000004930	GFI1	51	44.785	ENSCVAG00000020119	-	71	44.785
ENSCVAG00000004930	GFI1	51	42.857	ENSCVAG00000017511	-	95	42.857
ENSCVAG00000004930	GFI1	59	41.379	ENSCVAG00000018507	-	67	38.922
ENSCVAG00000004930	GFI1	55	43.972	ENSCVAG00000016883	-	59	43.972
ENSCVAG00000004930	GFI1	73	44.643	ENSCVAG00000005507	-	96	44.643
ENSCVAG00000004930	GFI1	52	42.857	ENSCVAG00000016181	-	93	42.857
ENSCVAG00000004930	GFI1	65	45.098	ENSCVAG00000021107	-	97	41.722
ENSCVAG00000004930	GFI1	65	44.643	ENSCVAG00000016796	-	82	44.643
ENSCVAG00000004930	GFI1	50	43.636	ENSCVAG00000001369	-	79	43.636
ENSCVAG00000004930	GFI1	60	44.444	ENSCVAG00000003630	-	58	44.720
ENSCVAG00000004930	GFI1	51	43.353	ENSCVAG00000009981	-	90	43.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000004930	GFI1	100	58.974	ENSG00000162676	GFI1	100	58.508	Homo_sapiens
ENSCVAG00000004930	GFI1	100	61.707	ENSAPOG00000015189	gfi1ab	100	59.466	Acanthochromis_polyacanthus
ENSCVAG00000004930	GFI1	100	61.728	ENSACIG00000016354	gfi1ab	100	60.000	Amphilophus_citrinellus
ENSCVAG00000004930	GFI1	100	54.000	ENSAOCG00000008339	gfi1ab	100	52.250	Amphiprion_ocellaris
ENSCVAG00000004930	GFI1	100	61.951	ENSAPEG00000023870	gfi1ab	100	60.345	Amphiprion_percula
ENSCVAG00000004930	GFI1	100	58.231	ENSATEG00000009167	gfi1ab	89	56.020	Anabas_testudineus
ENSCVAG00000004930	GFI1	79	64.220	ENSAPLG00000015700	GFI1	86	66.026	Anas_platyrhynchos
ENSCVAG00000004930	GFI1	100	60.048	ENSACAG00000004498	GFI1	100	60.097	Anolis_carolinensis
ENSCVAG00000004930	GFI1	100	59.624	ENSANAG00000019656	GFI1	100	58.080	Aotus_nancymaae
ENSCVAG00000004930	GFI1	100	61.800	ENSACLG00000026458	gfi1ab	93	60.644	Astatotilapia_calliptera
ENSCVAG00000004930	GFI1	100	57.108	ENSAMXG00000039600	gfi1ab	100	56.618	Astyanax_mexicanus
ENSCVAG00000004930	GFI1	100	60.738	ENSAMXG00000006669	GFI1	100	67.568	Astyanax_mexicanus
ENSCVAG00000004930	GFI1	100	60.798	ENSBTAG00000016723	GFI1	100	59.906	Bos_taurus
ENSCVAG00000004930	GFI1	100	58.741	ENSCJAG00000017609	GFI1	100	58.645	Callithrix_jacchus
ENSCVAG00000004930	GFI1	100	60.140	ENSCAFG00000020155	GFI1	100	59.953	Canis_familiaris
ENSCVAG00000004930	GFI1	100	59.907	ENSCAFG00020013371	GFI1	88	59.953	Canis_lupus_dingo
ENSCVAG00000004930	GFI1	100	60.606	ENSCHIG00000016135	GFI1	100	59.906	Capra_hircus
ENSCVAG00000004930	GFI1	100	60.187	ENSCPOG00000011727	GFI1	100	58.140	Cavia_porcellus
ENSCVAG00000004930	GFI1	100	59.251	ENSCCAG00000036072	GFI1	100	58.080	Cebus_capucinus
ENSCVAG00000004930	GFI1	100	58.974	ENSCATG00000037873	GFI1	100	58.508	Cercocebus_atys
ENSCVAG00000004930	GFI1	87	83.099	ENSCLAG00000005915	GFI1	82	80.631	Chinchilla_lanigera
ENSCVAG00000004930	GFI1	99	52.830	ENSCSAG00000001469	GFI1	100	52.291	Chlorocebus_sabaeus
ENSCVAG00000004930	GFI1	100	59.207	ENSCANG00000034077	GFI1	100	58.508	Colobus_angolensis_palliatus
ENSCVAG00000004930	GFI1	100	58.469	ENSCGRG00001015432	Gfi1	100	58.314	Cricetulus_griseus_chok1gshd
ENSCVAG00000004930	GFI1	100	70.803	ENSCSEG00000017729	GFI1	100	71.290	Cynoglossus_semilaevis
ENSCVAG00000004930	GFI1	100	63.835	ENSDARG00000044457	gfi1ab	100	62.195	Danio_rerio
ENSCVAG00000004930	GFI1	100	58.605	ENSDNOG00000000782	GFI1	97	58.314	Dasypus_novemcinctus
ENSCVAG00000004930	GFI1	51	72.683	ENSEBUG00000008075	gfi1ab	69	72.683	Eptatretus_burgeri
ENSCVAG00000004930	GFI1	100	60.329	ENSEASG00005015509	GFI1	86	61.321	Equus_asinus_asinus
ENSCVAG00000004930	GFI1	99	54.768	ENSECAG00000006647	GFI1	92	52.308	Equus_caballus
ENSCVAG00000004930	GFI1	100	59.620	ENSEEUG00000000198	GFI1	100	59.145	Erinaceus_europaeus
ENSCVAG00000004930	GFI1	100	61.743	ENSELUG00000003015	gfi1ab	99	61.220	Esox_lucius
ENSCVAG00000004930	GFI1	100	62.379	ENSELUG00000019033	GFI1	100	60.732	Esox_lucius
ENSCVAG00000004930	GFI1	100	60.093	ENSFCAG00000005914	GFI1	100	59.953	Felis_catus
ENSCVAG00000004930	GFI1	100	85.468	ENSFHEG00000000341	GFI1	100	85.468	Fundulus_heteroclitus
ENSCVAG00000004930	GFI1	100	60.000	ENSFHEG00000010997	gfi1ab	100	58.706	Fundulus_heteroclitus
ENSCVAG00000004930	GFI1	100	60.147	ENSGMOG00000007737	gfi1ab	100	59.459	Gadus_morhua
ENSCVAG00000004930	GFI1	100	60.047	ENSGALG00000043650	GFI1	100	59.338	Gallus_gallus
ENSCVAG00000004930	GFI1	100	83.005	ENSGAFG00000018063	GFI1	100	83.251	Gambusia_affinis
ENSCVAG00000004930	GFI1	100	60.291	ENSGAFG00000016637	gfi1ab	100	58.313	Gambusia_affinis
ENSCVAG00000004930	GFI1	100	61.443	ENSGACG00000004257	gfi1ab	97	60.750	Gasterosteus_aculeatus
ENSCVAG00000004930	GFI1	100	58.974	ENSGGOG00000005320	GFI1	100	58.508	Gorilla_gorilla
ENSCVAG00000004930	GFI1	100	61.139	ENSHBUG00000011969	gfi1ab	100	59.406	Haplochromis_burtoni
ENSCVAG00000004930	GFI1	100	61.268	ENSHGLG00000008020	GFI1	100	60.329	Heterocephalus_glaber_female
ENSCVAG00000004930	GFI1	100	61.268	ENSHGLG00100000610	GFI1	100	60.329	Heterocephalus_glaber_male
ENSCVAG00000004930	GFI1	100	63.725	ENSHCOG00000019555	GFI1	100	67.442	Hippocampus_comes
ENSCVAG00000004930	GFI1	100	53.521	ENSHCOG00000008590	gfi1ab	100	51.942	Hippocampus_comes
ENSCVAG00000004930	GFI1	100	59.506	ENSIPUG00000010071	gfi1ab	87	58.911	Ictalurus_punctatus
ENSCVAG00000004930	GFI1	100	57.831	ENSIPUG00000013414	GFI1	100	56.934	Ictalurus_punctatus
ENSCVAG00000004930	GFI1	100	59.674	ENSSTOG00000014583	GFI1	100	57.176	Ictidomys_tridecemlineatus
ENSCVAG00000004930	GFI1	100	59.420	ENSKMAG00000003810	gfi1ab	100	57.246	Kryptolebias_marmoratus
ENSCVAG00000004930	GFI1	100	60.000	ENSLBEG00000027776	gfi1ab	100	58.272	Labrus_bergylta
ENSCVAG00000004930	GFI1	100	72.775	ENSLACG00000017590	-	58	72.775	Latimeria_chalumnae
ENSCVAG00000004930	GFI1	100	59.472	ENSLACG00000013362	GFI1	98	58.473	Latimeria_chalumnae
ENSCVAG00000004930	GFI1	100	61.429	ENSLOCG00000004711	gfi1ab	100	60.000	Lepisosteus_oculatus
ENSCVAG00000004930	GFI1	100	57.957	ENSLAFG00000018346	GFI1	100	58.670	Loxodonta_africana
ENSCVAG00000004930	GFI1	100	58.974	ENSMFAG00000045801	GFI1	100	58.508	Macaca_fascicularis
ENSCVAG00000004930	GFI1	100	58.974	ENSMNEG00000036338	GFI1	100	58.508	Macaca_nemestrina
ENSCVAG00000004930	GFI1	100	58.974	ENSMLEG00000036181	GFI1	100	58.508	Mandrillus_leucophaeus
ENSCVAG00000004930	GFI1	100	61.205	ENSMAMG00000008125	gfi1ab	100	59.512	Mastacembelus_armatus
ENSCVAG00000004930	GFI1	100	60.964	ENSMZEG00005009895	gfi1ab	100	59.611	Maylandia_zebra
ENSCVAG00000004930	GFI1	88	62.363	ENSMGAG00000008187	GFI1	90	67.077	Meleagris_gallopavo
ENSCVAG00000004930	GFI1	100	59.155	ENSMICG00000047208	GFI1	100	57.968	Microcebus_murinus
ENSCVAG00000004930	GFI1	100	58.209	ENSMMOG00000005556	gfi1ab	100	57.598	Mola_mola
ENSCVAG00000004930	GFI1	100	59.953	ENSMODG00000011802	GFI1	100	59.535	Monodelphis_domestica
ENSCVAG00000004930	GFI1	100	59.801	ENSMALG00000014672	gfi1ab	100	59.000	Monopterus_albus
ENSCVAG00000004930	GFI1	100	59.441	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSCVAG00000004930	GFI1	100	60.789	ENSMUSG00000029275	Gfi1	100	59.165	Mus_musculus
ENSCVAG00000004930	GFI1	100	59.815	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSCVAG00000004930	GFI1	100	59.441	MGP_SPRETEiJ_G0028507	Gfi1	100	58.199	Mus_spretus
ENSCVAG00000004930	GFI1	100	61.916	ENSMPUG00000004178	GFI1	97	60.741	Mustela_putorius_furo
ENSCVAG00000004930	GFI1	100	60.187	ENSMLUG00000015191	GFI1	97	58.920	Myotis_lucifugus
ENSCVAG00000004930	GFI1	100	60.723	ENSNBRG00000015774	gfi1ab	100	58.134	Neolamprologus_brichardi
ENSCVAG00000004930	GFI1	90	59.269	ENSNLEG00000010470	GFI1	83	63.905	Nomascus_leucogenys
ENSCVAG00000004930	GFI1	100	59.770	ENSOPRG00000001473	GFI1	100	58.042	Ochotona_princeps
ENSCVAG00000004930	GFI1	100	60.964	ENSONIG00000019246	gfi1ab	100	59.367	Oreochromis_niloticus
ENSCVAG00000004930	GFI1	99	52.000	ENSOCUG00000023553	GFI1	93	53.100	Oryctolagus_cuniculus
ENSCVAG00000004930	GFI1	100	60.000	ENSORLG00000013806	gfi1ab	100	58.049	Oryzias_latipes
ENSCVAG00000004930	GFI1	100	70.574	ENSORLG00000005060	GFI1	100	68.889	Oryzias_latipes
ENSCVAG00000004930	GFI1	100	64.838	ENSORLG00020002817	GFI1	100	75.610	Oryzias_latipes_hni
ENSCVAG00000004930	GFI1	100	60.488	ENSORLG00020001602	gfi1ab	100	58.780	Oryzias_latipes_hni
ENSCVAG00000004930	GFI1	100	69.492	ENSORLG00015006070	GFI1	100	70.460	Oryzias_latipes_hsok
ENSCVAG00000004930	GFI1	100	70.098	ENSOMEG00000016722	GFI1	100	70.617	Oryzias_melastigma
ENSCVAG00000004930	GFI1	100	60.097	ENSOGAG00000027913	GFI1	100	59.606	Otolemur_garnettii
ENSCVAG00000004930	GFI1	100	60.050	ENSPPAG00000042186	GFI1	100	59.305	Pan_paniscus
ENSCVAG00000004930	GFI1	100	60.093	ENSPPRG00000007521	GFI1	100	59.953	Panthera_pardus
ENSCVAG00000004930	GFI1	100	58.741	ENSPTRG00000043053	GFI1	100	58.275	Pan_troglodytes
ENSCVAG00000004930	GFI1	100	58.974	ENSPANG00000016433	GFI1	100	58.508	Papio_anubis
ENSCVAG00000004930	GFI1	100	62.201	ENSPKIG00000004263	GFI1	100	59.427	Paramormyrops_kingsleyae
ENSCVAG00000004930	GFI1	79	65.312	ENSPSIG00000008734	GFI1	87	65.741	Pelodiscus_sinensis
ENSCVAG00000004930	GFI1	99	57.071	ENSPMGG00000011041	GFI1	99	57.576	Periophthalmus_magnuspinnatus
ENSCVAG00000004930	GFI1	100	59.024	ENSPMGG00000012546	gfi1ab	100	58.168	Periophthalmus_magnuspinnatus
ENSCVAG00000004930	GFI1	100	61.429	ENSPCIG00000013728	GFI1	100	61.667	Phascolarctos_cinereus
ENSCVAG00000004930	GFI1	100	60.145	ENSPFOG00000023214	gfi1ab	100	58.968	Poecilia_formosa
ENSCVAG00000004930	GFI1	100	60.145	ENSPLAG00000010879	gfi1ab	100	70.000	Poecilia_latipinna
ENSCVAG00000004930	GFI1	100	82.310	ENSPLAG00000005376	GFI1	91	82.310	Poecilia_latipinna
ENSCVAG00000004930	GFI1	100	60.145	ENSPMEG00000013694	gfi1ab	100	57.831	Poecilia_mexicana
ENSCVAG00000004930	GFI1	100	82.921	ENSPMEG00000019299	GFI1	100	82.921	Poecilia_mexicana
ENSCVAG00000004930	GFI1	100	60.145	ENSPREG00000014097	gfi1ab	100	57.831	Poecilia_reticulata
ENSCVAG00000004930	GFI1	100	71.259	ENSPREG00000007997	GFI1	100	71.259	Poecilia_reticulata
ENSCVAG00000004930	GFI1	100	50.000	ENSPCAG00000011020	GFI1	100	50.000	Procavia_capensis
ENSCVAG00000004930	GFI1	100	59.016	ENSPCOG00000020540	GFI1	100	57.981	Propithecus_coquereli
ENSCVAG00000004930	GFI1	100	59.906	ENSPVAG00000006928	GFI1	100	60.235	Pteropus_vampyrus
ENSCVAG00000004930	GFI1	100	60.964	ENSPNYG00000021183	gfi1ab	100	60.644	Pundamilia_nyererei
ENSCVAG00000004930	GFI1	100	56.068	ENSPNAG00000028014	GFI1	100	55.693	Pygocentrus_nattereri
ENSCVAG00000004930	GFI1	100	57.488	ENSPNAG00000027258	gfi1ab	100	55.769	Pygocentrus_nattereri
ENSCVAG00000004930	GFI1	100	59.302	ENSRNOG00000002042	Gfi1	100	58.140	Rattus_norvegicus
ENSCVAG00000004930	GFI1	100	58.974	ENSRBIG00000036467	GFI1	100	59.155	Rhinopithecus_bieti
ENSCVAG00000004930	GFI1	100	58.974	ENSRROG00000031687	GFI1	100	59.155	Rhinopithecus_roxellana
ENSCVAG00000004930	GFI1	100	59.112	ENSSBOG00000031300	GFI1	100	58.741	Saimiri_boliviensis_boliviensis
ENSCVAG00000004930	GFI1	100	61.848	ENSSFOG00015020295	gfi1	100	60.386	Scleropages_formosus
ENSCVAG00000004930	GFI1	100	60.345	ENSSMAG00000002782	gfi1ab	100	58.867	Scophthalmus_maximus
ENSCVAG00000004930	GFI1	100	60.902	ENSSDUG00000022410	gfi1ab	100	58.897	Seriola_dumerili
ENSCVAG00000004930	GFI1	100	61.153	ENSSLDG00000020163	gfi1ab	100	59.148	Seriola_lalandi_dorsalis
ENSCVAG00000004930	GFI1	81	76.471	ENSSPAG00000009140	gfi1ab	100	76.471	Stegastes_partitus
ENSCVAG00000004930	GFI1	100	61.374	ENSSSCG00000006902	GFI1	100	60.238	Sus_scrofa
ENSCVAG00000004930	GFI1	79	66.462	ENSTGUG00000006060	GFI1	90	66.462	Taeniopygia_guttata
ENSCVAG00000004930	GFI1	100	59.169	ENSTRUG00000000415	gfi1ab	100	58.105	Takifugu_rubripes
ENSCVAG00000004930	GFI1	100	57.385	ENSTNIG00000000651	gfi1ab	97	56.479	Tetraodon_nigroviridis
ENSCVAG00000004930	GFI1	100	60.284	ENSTTRG00000000082	GFI1	100	59.529	Tursiops_truncatus
ENSCVAG00000004930	GFI1	100	62.077	ENSUAMG00000021124	GFI1	91	61.165	Ursus_americanus
ENSCVAG00000004930	GFI1	100	61.071	ENSXETG00000023006	gfi1	98	59.559	Xenopus_tropicalis
ENSCVAG00000004930	GFI1	100	80.000	ENSXMAG00000009274	GFI1	70	80.286	Xiphophorus_maculatus
ENSCVAG00000004930	GFI1	100	60.000	ENSXMAG00000010523	gfi1ab	100	58.809	Xiphophorus_maculatus