EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005146 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8792 bases
Position: chrKL652750.1:208078-216869
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000003802	DEAD	PF00270.29	1.8e-07	1	1
ENSCVAP00000022395	DEAD	PF00270.29	4.7e-07	1	1
ENSCVAP00000003813	DEAD	PF00270.29	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009414	-	804	-	ENSCVAP00000003813	267 (aa)	-	-
ENSCVAT00000009392	-	858	-	ENSCVAP00000022395	285 (aa)	-	-
ENSCVAT00000009425	-	543	-	ENSCVAP00000003802	180 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005146	-	87	31.724	ENSCVAG00000019209	eif4a1b	62	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005146	-	94	98.039	ENSG00000123136	DDX39A	100	84.259	Homo_sapiens
ENSCVAG00000005146	-	94	96.078	ENSAPOG00000009309	-	50	96.939	Acanthochromis_polyacanthus
ENSCVAG00000005146	-	94	98.039	ENSAMEG00000013379	DDX39A	50	98.039	Ailuropoda_melanoleuca
ENSCVAG00000005146	-	94	98.039	ENSAPEG00000017193	-	51	93.805	Amphiprion_percula
ENSCVAG00000005146	-	74	61.404	ENSANAG00000025403	-	67	48.408	Aotus_nancymaae
ENSCVAG00000005146	-	94	98.039	ENSANAG00000036829	-	51	98.039	Aotus_nancymaae
ENSCVAG00000005146	-	94	98.039	ENSACLG00000004945	-	51	98.039	Astatotilapia_calliptera
ENSCVAG00000005146	-	94	98.039	ENSAMXG00000018631	DDX39A	51	98.039	Astyanax_mexicanus
ENSCVAG00000005146	-	94	98.039	ENSBTAG00000021820	DDX39A	51	98.039	Bos_taurus
ENSCVAG00000005146	-	94	98.039	ENSCJAG00000004760	DDX39A	52	95.918	Callithrix_jacchus
ENSCVAG00000005146	-	94	98.039	ENSCAFG00000016355	DDX39A	51	98.039	Canis_familiaris
ENSCVAG00000005146	-	94	98.039	ENSCAFG00020007399	DDX39A	51	98.039	Canis_lupus_dingo
ENSCVAG00000005146	-	94	98.039	ENSCHIG00000019059	DDX39A	51	98.039	Capra_hircus
ENSCVAG00000005146	-	94	98.039	ENSTSYG00000030248	DDX39A	51	98.039	Carlito_syrichta
ENSCVAG00000005146	-	94	98.039	ENSCAPG00000010901	DDX39A	51	98.039	Cavia_aperea
ENSCVAG00000005146	-	94	98.039	ENSCPOG00000008615	DDX39A	51	98.039	Cavia_porcellus
ENSCVAG00000005146	-	94	98.039	ENSCCAG00000034932	DDX39A	51	98.039	Cebus_capucinus
ENSCVAG00000005146	-	94	98.039	ENSCATG00000044440	DDX39A	51	98.039	Cercocebus_atys
ENSCVAG00000005146	-	94	98.039	ENSCLAG00000015069	DDX39A	51	98.039	Chinchilla_lanigera
ENSCVAG00000005146	-	94	98.039	ENSCSAG00000006342	DDX39A	51	98.039	Chlorocebus_sabaeus
ENSCVAG00000005146	-	94	98.039	ENSCPBG00000011879	DDX39A	51	98.039	Chrysemys_picta_bellii
ENSCVAG00000005146	-	94	98.039	ENSCANG00000037031	-	51	98.039	Colobus_angolensis_palliatus
ENSCVAG00000005146	-	94	90.196	ENSCANG00000034172	-	51	90.196	Colobus_angolensis_palliatus
ENSCVAG00000005146	-	94	98.039	ENSCGRG00001001611	Ddx39	51	98.039	Cricetulus_griseus_chok1gshd
ENSCVAG00000005146	-	94	98.039	ENSCGRG00000014915	Ddx39	51	98.039	Cricetulus_griseus_crigri
ENSCVAG00000005146	-	94	98.039	ENSDARG00000006225	ddx39aa	51	98.039	Danio_rerio
ENSCVAG00000005146	-	94	98.039	ENSDARG00000015111	ddx39ab	51	98.039	Danio_rerio
ENSCVAG00000005146	-	94	98.039	ENSDORG00000013041	Ddx39	51	98.039	Dipodomys_ordii
ENSCVAG00000005146	-	94	94.118	FBgn0014189	Hel25E	51	90.816	Drosophila_melanogaster
ENSCVAG00000005146	-	94	98.039	ENSEBUG00000010042	ddx39aa	50	98.039	Eptatretus_burgeri
ENSCVAG00000005146	-	94	98.039	ENSEASG00005015272	DDX39A	51	98.039	Equus_asinus_asinus
ENSCVAG00000005146	-	94	98.039	ENSECAG00000040285	DDX39A	51	98.039	Equus_caballus
ENSCVAG00000005146	-	94	98.039	ENSEEUG00000015035	DDX39A	50	91.837	Erinaceus_europaeus
ENSCVAG00000005146	-	94	98.039	ENSELUG00000010581	DDX39A	50	98.039	Esox_lucius
ENSCVAG00000005146	-	94	98.039	ENSFCAG00000013488	DDX39A	51	98.039	Felis_catus
ENSCVAG00000005146	-	94	98.039	ENSFDAG00000014649	DDX39A	51	98.039	Fukomys_damarensis
ENSCVAG00000005146	-	94	98.039	ENSFHEG00000002643	ddx39aa	51	98.039	Fundulus_heteroclitus
ENSCVAG00000005146	-	94	98.039	ENSGMOG00000014316	DDX39A	51	98.039	Gadus_morhua
ENSCVAG00000005146	-	91	98.039	ENSGAFG00000014768	-	51	96.939	Gambusia_affinis
ENSCVAG00000005146	-	94	98.039	ENSGAFG00000010170	ddx39aa	51	98.039	Gambusia_affinis
ENSCVAG00000005146	-	94	98.039	ENSGACG00000006096	DDX39A	51	98.039	Gasterosteus_aculeatus
ENSCVAG00000005146	-	94	98.039	ENSGAGG00000007527	DDX39A	51	98.039	Gopherus_agassizii
ENSCVAG00000005146	-	94	98.039	ENSGGOG00000005414	DDX39A	51	98.039	Gorilla_gorilla
ENSCVAG00000005146	-	94	98.039	ENSHBUG00000003748	ddx39aa	51	98.039	Haplochromis_burtoni
ENSCVAG00000005146	-	94	98.039	ENSHGLG00000018263	DDX39A	51	98.039	Heterocephalus_glaber_female
ENSCVAG00000005146	-	94	98.039	ENSIPUG00000021552	ddx39aa	50	96.939	Ictalurus_punctatus
ENSCVAG00000005146	-	94	98.039	ENSSTOG00000013762	DDX39A	51	98.039	Ictidomys_tridecemlineatus
ENSCVAG00000005146	-	94	94.118	ENSJJAG00000017826	-	53	80.165	Jaculus_jaculus
ENSCVAG00000005146	-	94	98.039	ENSJJAG00000004337	-	51	98.039	Jaculus_jaculus
ENSCVAG00000005146	-	94	98.039	ENSKMAG00000000831	-	51	98.039	Kryptolebias_marmoratus
ENSCVAG00000005146	-	94	98.039	ENSLBEG00000025618	-	51	98.039	Labrus_bergylta
ENSCVAG00000005146	-	94	98.039	ENSLACG00000015063	DDX39A	50	98.039	Latimeria_chalumnae
ENSCVAG00000005146	-	94	98.039	ENSLOCG00000006534	DDX39A	51	98.039	Lepisosteus_oculatus
ENSCVAG00000005146	-	94	98.039	ENSLAFG00000022777	DDX39A	51	98.039	Loxodonta_africana
ENSCVAG00000005146	-	94	98.039	ENSMFAG00000044174	DDX39A	51	98.039	Macaca_fascicularis
ENSCVAG00000005146	-	94	98.039	ENSMMUG00000005723	DDX39A	51	98.039	Macaca_mulatta
ENSCVAG00000005146	-	94	98.039	ENSMNEG00000044292	DDX39A	51	98.039	Macaca_nemestrina
ENSCVAG00000005146	-	94	98.039	ENSMLEG00000007602	DDX39A	51	98.039	Mandrillus_leucophaeus
ENSCVAG00000005146	-	94	98.039	ENSMZEG00005023935	ddx39aa	51	98.039	Maylandia_zebra
ENSCVAG00000005146	-	94	98.039	ENSMAUG00000008459	Ddx39	51	98.039	Mesocricetus_auratus
ENSCVAG00000005146	-	94	98.039	ENSMICG00000015325	DDX39A	51	98.039	Microcebus_murinus
ENSCVAG00000005146	-	94	98.039	ENSMOCG00000016890	Ddx39	51	85.841	Microtus_ochrogaster
ENSCVAG00000005146	-	94	98.039	ENSMMOG00000006328	DDX39A	51	98.039	Mola_mola
ENSCVAG00000005146	-	94	98.039	ENSMALG00000002697	DDX39A	51	98.039	Monopterus_albus
ENSCVAG00000005146	-	94	98.039	MGP_CAROLIEiJ_G0031277	Ddx39	51	98.039	Mus_caroli
ENSCVAG00000005146	-	94	98.039	ENSMUSG00000005481	Ddx39	51	98.039	Mus_musculus
ENSCVAG00000005146	-	94	98.039	MGP_PahariEiJ_G0022883	Ddx39	51	98.039	Mus_pahari
ENSCVAG00000005146	-	94	98.039	MGP_SPRETEiJ_G0032396	Ddx39	51	98.039	Mus_spretus
ENSCVAG00000005146	-	94	92.157	ENSMLUG00000000939	-	51	92.157	Myotis_lucifugus
ENSCVAG00000005146	-	94	98.039	ENSMLUG00000009280	-	50	98.039	Myotis_lucifugus
ENSCVAG00000005146	-	94	96.078	ENSMLUG00000028448	-	51	96.078	Myotis_lucifugus
ENSCVAG00000005146	-	94	92.157	ENSMLUG00000026217	-	51	92.157	Myotis_lucifugus
ENSCVAG00000005146	-	94	98.039	ENSNGAG00000010734	Ddx39	51	98.039	Nannospalax_galili
ENSCVAG00000005146	-	94	98.039	ENSNBRG00000001661	ddx39aa	51	98.039	Neolamprologus_brichardi
ENSCVAG00000005146	-	94	98.039	ENSNLEG00000013515	DDX39A	50	75.373	Nomascus_leucogenys
ENSCVAG00000005146	-	94	98.039	ENSODEG00000017817	-	51	98.039	Octodon_degus
ENSCVAG00000005146	-	94	98.039	ENSODEG00000009068	-	52	98.039	Octodon_degus
ENSCVAG00000005146	-	94	98.039	ENSONIG00000018177	ddx39aa	51	98.039	Oreochromis_niloticus
ENSCVAG00000005146	-	94	98.039	ENSORLG00000010565	DDX39A	51	98.039	Oryzias_latipes
ENSCVAG00000005146	-	94	98.039	ENSORLG00020004181	DDX39A	51	98.039	Oryzias_latipes_hni
ENSCVAG00000005146	-	94	98.039	ENSORLG00015000447	-	51	98.039	Oryzias_latipes_hsok
ENSCVAG00000005146	-	94	98.039	ENSOMEG00000009789	-	50	98.039	Oryzias_melastigma
ENSCVAG00000005146	-	96	85.714	ENSOGAG00000025638	-	51	85.714	Otolemur_garnettii
ENSCVAG00000005146	-	94	98.039	ENSOGAG00000010280	-	51	98.039	Otolemur_garnettii
ENSCVAG00000005146	-	94	86.275	ENSOGAG00000029626	-	51	86.275	Otolemur_garnettii
ENSCVAG00000005146	-	94	98.039	ENSPPAG00000040065	DDX39A	51	98.039	Pan_paniscus
ENSCVAG00000005146	-	94	98.039	ENSPPRG00000003506	DDX39A	51	98.039	Panthera_pardus
ENSCVAG00000005146	-	94	98.039	ENSPTIG00000017287	DDX39A	51	98.039	Panthera_tigris_altaica
ENSCVAG00000005146	-	94	98.039	ENSPTRG00000010590	DDX39A	51	98.039	Pan_troglodytes
ENSCVAG00000005146	-	94	98.039	ENSPTRG00000042673	-	51	98.039	Pan_troglodytes
ENSCVAG00000005146	-	94	98.039	ENSPANG00000015036	DDX39A	51	98.039	Papio_anubis
ENSCVAG00000005146	-	94	98.039	ENSPKIG00000007272	-	51	98.039	Paramormyrops_kingsleyae
ENSCVAG00000005146	-	94	98.039	ENSPKIG00000006284	DDX39A	51	98.039	Paramormyrops_kingsleyae
ENSCVAG00000005146	-	94	80.392	ENSPEMG00000014184	-	51	80.392	Peromyscus_maniculatus_bairdii
ENSCVAG00000005146	-	94	98.039	ENSPEMG00000017767	-	51	98.039	Peromyscus_maniculatus_bairdii
ENSCVAG00000005146	-	94	98.039	ENSPMAG00000009017	ddx39aa	50	92.857	Petromyzon_marinus
ENSCVAG00000005146	-	94	98.039	ENSPFOG00000000914	ddx39aa	51	98.039	Poecilia_formosa
ENSCVAG00000005146	-	94	98.039	ENSPLAG00000008645	-	51	98.039	Poecilia_latipinna
ENSCVAG00000005146	-	94	98.039	ENSPMEG00000021471	-	51	98.039	Poecilia_mexicana
ENSCVAG00000005146	-	94	98.039	ENSPREG00000017406	ddx39aa	51	98.039	Poecilia_reticulata
ENSCVAG00000005146	-	94	98.039	ENSPPYG00000009642	DDX39A	51	98.039	Pongo_abelii
ENSCVAG00000005146	-	94	98.039	ENSPCOG00000024047	-	50	88.496	Propithecus_coquereli
ENSCVAG00000005146	-	94	94.118	ENSPCOG00000027926	-	53	91.837	Propithecus_coquereli
ENSCVAG00000005146	-	94	98.039	ENSPVAG00000006950	DDX39A	51	98.039	Pteropus_vampyrus
ENSCVAG00000005146	-	94	98.039	ENSPNYG00000016438	-	51	98.039	Pundamilia_nyererei
ENSCVAG00000005146	-	94	98.039	ENSPNAG00000014271	DDX39A	51	98.039	Pygocentrus_nattereri
ENSCVAG00000005146	-	94	98.039	ENSPNAG00000022623	-	51	98.039	Pygocentrus_nattereri
ENSCVAG00000005146	-	94	98.039	ENSRNOG00000004373	Ddx39a	51	98.039	Rattus_norvegicus
ENSCVAG00000005146	-	94	98.039	ENSRBIG00000036352	DDX39A	51	98.039	Rhinopithecus_bieti
ENSCVAG00000005146	-	94	98.039	ENSRROG00000027985	DDX39A	51	98.039	Rhinopithecus_roxellana
ENSCVAG00000005146	-	94	98.039	ENSSBOG00000034939	DDX39A	51	98.039	Saimiri_boliviensis_boliviensis
ENSCVAG00000005146	-	94	98.039	ENSSHAG00000005494	DDX39A	51	98.039	Sarcophilus_harrisii
ENSCVAG00000005146	-	94	98.039	ENSSFOG00015007928	ddx39a	51	98.039	Scleropages_formosus
ENSCVAG00000005146	-	94	98.039	ENSSFOG00015005701	DDX39A	51	98.039	Scleropages_formosus
ENSCVAG00000005146	-	94	98.039	ENSSMAG00000016567	ddx39aa	56	96.460	Scophthalmus_maximus
ENSCVAG00000005146	-	63	94.690	ENSSDUG00000023694	-	88	94.690	Seriola_dumerili
ENSCVAG00000005146	-	74	85.714	ENSSLDG00000010812	-	97	85.714	Seriola_lalandi_dorsalis
ENSCVAG00000005146	-	94	98.039	ENSTRUG00000022930	DDX39A	51	98.039	Takifugu_rubripes
ENSCVAG00000005146	-	94	98.039	ENSTTRG00000007931	DDX39A	51	98.039	Tursiops_truncatus
ENSCVAG00000005146	-	94	98.039	ENSUAMG00000020022	DDX39A	51	98.039	Ursus_americanus
ENSCVAG00000005146	-	94	98.039	ENSUMAG00000004317	DDX39A	50	98.039	Ursus_maritimus
ENSCVAG00000005146	-	94	98.039	ENSVVUG00000026939	DDX39A	51	98.039	Vulpes_vulpes
ENSCVAG00000005146	-	94	98.039	ENSXMAG00000006547	ddx39aa	51	98.039	Xiphophorus_maculatus