EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005212 (Gene tree)
Gene ID: 107090097
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9149 bases
Position: chrKL652781.1:379142-388290
Accession: 107090097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022492	RNase_H2-Ydr279	PF09468.10	5.1e-15	1	1
ENSCVAP00000003950	RNase_H2-Ydr279	PF09468.10	5.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009173	-	1258	-	ENSCVAP00000022492	280 (aa)	-	-
ENSCVAT00000009165	-	1336	XM_015383283	ENSCVAP00000003950	306 (aa)	XP_015238769	UPI000742B8C2

Gene Model

Click here to download ENSCVAG00000005212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005212's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005212	rnaseh2b	88	51.264	ENSG00000136104	RNASEH2B	96	51.292	Homo_sapiens
ENSCVAG00000005212	rnaseh2b	100	82.680	ENSAPOG00000010496	rnaseh2b	100	82.680	Acanthochromis_polyacanthus
ENSCVAG00000005212	rnaseh2b	90	48.936	ENSAMEG00000012040	RNASEH2B	95	48.936	Ailuropoda_melanoleuca
ENSCVAG00000005212	rnaseh2b	100	70.261	ENSACIG00000021991	rnaseh2b	97	73.500	Amphilophus_citrinellus
ENSCVAG00000005212	rnaseh2b	100	82.026	ENSAOCG00000013398	rnaseh2b	100	82.026	Amphiprion_ocellaris
ENSCVAG00000005212	rnaseh2b	100	81.699	ENSAPEG00000006033	rnaseh2b	100	81.699	Amphiprion_percula
ENSCVAG00000005212	rnaseh2b	100	81.699	ENSATEG00000008370	rnaseh2b	100	81.699	Anabas_testudineus
ENSCVAG00000005212	rnaseh2b	83	61.868	ENSAPLG00000008955	RNASEH2B	99	62.132	Anas_platyrhynchos
ENSCVAG00000005212	rnaseh2b	93	53.448	ENSACAG00000011679	RNASEH2B	97	53.448	Anolis_carolinensis
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSANAG00000020662	RNASEH2B	89	50.542	Aotus_nancymaae
ENSCVAG00000005212	rnaseh2b	100	78.758	ENSACLG00000000467	rnaseh2b	100	78.758	Astatotilapia_calliptera
ENSCVAG00000005212	rnaseh2b	99	69.608	ENSAMXG00000014351	rnaseh2b	99	69.608	Astyanax_mexicanus
ENSCVAG00000005212	rnaseh2b	90	49.104	ENSBTAG00000020149	RNASEH2B	90	49.104	Bos_taurus
ENSCVAG00000005212	rnaseh2b	85	43.460	ENSCJAG00000003822	-	90	42.276	Callithrix_jacchus
ENSCVAG00000005212	rnaseh2b	87	51.128	ENSCJAG00000008585	-	88	51.128	Callithrix_jacchus
ENSCVAG00000005212	rnaseh2b	90	49.458	ENSCAFG00000004295	RNASEH2B	90	48.736	Canis_familiaris
ENSCVAG00000005212	rnaseh2b	90	49.458	ENSCAFG00020000250	RNASEH2B	90	49.458	Canis_lupus_dingo
ENSCVAG00000005212	rnaseh2b	75	45.923	ENSCHIG00000012982	-	82	45.923	Capra_hircus
ENSCVAG00000005212	rnaseh2b	90	49.455	ENSCHIG00000018220	RNASEH2B	90	49.455	Capra_hircus
ENSCVAG00000005212	rnaseh2b	90	42.500	ENSTSYG00000031177	-	90	43.636	Carlito_syrichta
ENSCVAG00000005212	rnaseh2b	90	49.458	ENSTSYG00000009176	-	90	49.458	Carlito_syrichta
ENSCVAG00000005212	rnaseh2b	87	42.910	ENSCAPG00000009978	RNASEH2B	91	43.284	Cavia_aperea
ENSCVAG00000005212	rnaseh2b	87	47.212	ENSCPOG00000032527	RNASEH2B	89	46.403	Cavia_porcellus
ENSCVAG00000005212	rnaseh2b	90	50.909	ENSCCAG00000026979	RNASEH2B	91	50.909	Cebus_capucinus
ENSCVAG00000005212	rnaseh2b	88	50.741	ENSCATG00000031336	RNASEH2B	76	50.741	Cercocebus_atys
ENSCVAG00000005212	rnaseh2b	87	50.741	ENSCLAG00000003517	RNASEH2B	76	49.821	Chinchilla_lanigera
ENSCVAG00000005212	rnaseh2b	89	49.818	ENSCSAG00000017701	RNASEH2B	83	49.818	Chlorocebus_sabaeus
ENSCVAG00000005212	rnaseh2b	95	41.497	ENSCHOG00000013688	RNASEH2B	95	42.177	Choloepus_hoffmanni
ENSCVAG00000005212	rnaseh2b	99	56.169	ENSCPBG00000008684	RNASEH2B	95	56.169	Chrysemys_picta_bellii
ENSCVAG00000005212	rnaseh2b	95	34.000	ENSCING00000016454	-	97	34.000	Ciona_intestinalis
ENSCVAG00000005212	rnaseh2b	90	50.000	ENSCANG00000041511	-	89	50.000	Colobus_angolensis_palliatus
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSCGRG00001000611	Rnaseh2b	90	51.254	Cricetulus_griseus_chok1gshd
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSCGRG00000006077	Rnaseh2b	90	51.254	Cricetulus_griseus_crigri
ENSCVAG00000005212	rnaseh2b	100	77.451	ENSCSEG00000004910	rnaseh2b	100	77.451	Cynoglossus_semilaevis
ENSCVAG00000005212	rnaseh2b	99	69.281	ENSDARG00000005128	rnaseh2b	99	69.281	Danio_rerio
ENSCVAG00000005212	rnaseh2b	87	47.955	ENSDNOG00000049666	-	87	47.955	Dasypus_novemcinctus
ENSCVAG00000005212	rnaseh2b	87	46.642	ENSDNOG00000034290	-	86	46.642	Dasypus_novemcinctus
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSDORG00000010708	Rnaseh2b	90	50.360	Dipodomys_ordii
ENSCVAG00000005212	rnaseh2b	84	38.760	ENSEBUG00000005965	rnaseh2b	98	38.760	Eptatretus_burgeri
ENSCVAG00000005212	rnaseh2b	90	50.903	ENSEASG00005017323	RNASEH2B	89	50.903	Equus_asinus_asinus
ENSCVAG00000005212	rnaseh2b	90	50.903	ENSECAG00000014262	RNASEH2B	89	50.903	Equus_caballus
ENSCVAG00000005212	rnaseh2b	100	73.616	ENSELUG00000019560	rnaseh2b	100	73.616	Esox_lucius
ENSCVAG00000005212	rnaseh2b	88	48.148	ENSFCAG00000014257	RNASEH2B	84	48.148	Felis_catus
ENSCVAG00000005212	rnaseh2b	90	62.094	ENSFALG00000008435	RNASEH2B	94	62.094	Ficedula_albicollis
ENSCVAG00000005212	rnaseh2b	87	48.519	ENSFDAG00000009920	RNASEH2B	93	48.519	Fukomys_damarensis
ENSCVAG00000005212	rnaseh2b	100	88.889	ENSFHEG00000012160	rnaseh2b	100	88.889	Fundulus_heteroclitus
ENSCVAG00000005212	rnaseh2b	100	66.026	ENSGMOG00000016830	rnaseh2b	100	66.026	Gadus_morhua
ENSCVAG00000005212	rnaseh2b	95	57.483	ENSGALG00000017015	RNASEH2B	100	57.929	Gallus_gallus
ENSCVAG00000005212	rnaseh2b	100	84.967	ENSGAFG00000021222	rnaseh2b	100	84.967	Gambusia_affinis
ENSCVAG00000005212	rnaseh2b	100	75.000	ENSGACG00000002821	rnaseh2b	100	75.000	Gasterosteus_aculeatus
ENSCVAG00000005212	rnaseh2b	91	58.781	ENSGAGG00000014722	RNASEH2B	99	58.781	Gopherus_agassizii
ENSCVAG00000005212	rnaseh2b	87	51.292	ENSGGOG00000001044	RNASEH2B	87	51.292	Gorilla_gorilla
ENSCVAG00000005212	rnaseh2b	100	79.412	ENSHBUG00000006049	rnaseh2b	100	79.412	Haplochromis_burtoni
ENSCVAG00000005212	rnaseh2b	87	49.627	ENSHGLG00100015953	RNASEH2B	91	49.627	Heterocephalus_glaber_male
ENSCVAG00000005212	rnaseh2b	100	70.130	ENSHCOG00000003318	rnaseh2b	100	70.130	Hippocampus_comes
ENSCVAG00000005212	rnaseh2b	100	71.987	ENSIPUG00000023815	rnaseh2b	100	71.987	Ictalurus_punctatus
ENSCVAG00000005212	rnaseh2b	87	51.504	ENSSTOG00000015126	RNASEH2B	91	51.504	Ictidomys_tridecemlineatus
ENSCVAG00000005212	rnaseh2b	87	50.746	ENSJJAG00000013335	Rnaseh2b	90	50.746	Jaculus_jaculus
ENSCVAG00000005212	rnaseh2b	100	85.621	ENSKMAG00000002198	rnaseh2b	100	85.621	Kryptolebias_marmoratus
ENSCVAG00000005212	rnaseh2b	100	79.085	ENSLBEG00000019331	rnaseh2b	100	79.085	Labrus_bergylta
ENSCVAG00000005212	rnaseh2b	68	58.491	ENSLACG00000010782	RNASEH2B	92	58.772	Latimeria_chalumnae
ENSCVAG00000005212	rnaseh2b	100	67.101	ENSLOCG00000009296	rnaseh2b	100	67.101	Lepisosteus_oculatus
ENSCVAG00000005212	rnaseh2b	87	50.558	ENSLAFG00000030158	RNASEH2B	90	49.640	Loxodonta_africana
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSMFAG00000038464	-	89	50.542	Macaca_fascicularis
ENSCVAG00000005212	rnaseh2b	90	46.209	ENSMMUG00000021746	RNASEH2B	89	45.259	Macaca_mulatta
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSMNEG00000030580	RNASEH2B	89	50.542	Macaca_nemestrina
ENSCVAG00000005212	rnaseh2b	90	50.000	ENSMLEG00000043911	-	89	50.000	Mandrillus_leucophaeus
ENSCVAG00000005212	rnaseh2b	100	80.392	ENSMAMG00000017109	rnaseh2b	100	80.392	Mastacembelus_armatus
ENSCVAG00000005212	rnaseh2b	100	74.183	ENSMZEG00005021926	rnaseh2b	100	75.163	Maylandia_zebra
ENSCVAG00000005212	rnaseh2b	85	60.837	ENSMGAG00000015025	RNASEH2B	97	61.151	Meleagris_gallopavo
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSMAUG00000016520	Rnaseh2b	87	52.222	Mesocricetus_auratus
ENSCVAG00000005212	rnaseh2b	87	50.741	ENSMICG00000000528	RNASEH2B	87	50.741	Microcebus_murinus
ENSCVAG00000005212	rnaseh2b	99	76.066	ENSMMOG00000019799	rnaseh2b	100	80.070	Mola_mola
ENSCVAG00000005212	rnaseh2b	98	53.135	ENSMODG00000010775	RNASEH2B	99	53.135	Monodelphis_domestica
ENSCVAG00000005212	rnaseh2b	99	81.967	ENSMALG00000004463	rnaseh2b	100	81.967	Monopterus_albus
ENSCVAG00000005212	rnaseh2b	72	52.703	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	53.571	Mus_caroli
ENSCVAG00000005212	rnaseh2b	87	52.239	ENSMUSG00000021932	Rnaseh2b	87	52.239	Mus_musculus
ENSCVAG00000005212	rnaseh2b	78	54.545	MGP_PahariEiJ_G0030407	-	95	37.425	Mus_pahari
ENSCVAG00000005212	rnaseh2b	78	45.872	ENSMPUG00000018010	RNASEH2B	91	45.872	Mustela_putorius_furo
ENSCVAG00000005212	rnaseh2b	90	51.986	ENSMLUG00000004065	-	89	51.986	Myotis_lucifugus
ENSCVAG00000005212	rnaseh2b	100	78.105	ENSNBRG00000003253	rnaseh2b	100	78.105	Neolamprologus_brichardi
ENSCVAG00000005212	rnaseh2b	87	51.292	ENSNLEG00000003804	RNASEH2B	87	51.292	Nomascus_leucogenys
ENSCVAG00000005212	rnaseh2b	91	55.674	ENSMEUG00000003665	RNASEH2B	97	55.674	Notamacropus_eugenii
ENSCVAG00000005212	rnaseh2b	53	50.000	ENSOPRG00000003695	-	51	51.829	Ochotona_princeps
ENSCVAG00000005212	rnaseh2b	69	46.667	ENSODEG00000005412	-	86	46.667	Octodon_degus
ENSCVAG00000005212	rnaseh2b	87	50.746	ENSODEG00000006793	-	87	50.746	Octodon_degus
ENSCVAG00000005212	rnaseh2b	100	78.431	ENSONIG00000006657	rnaseh2b	100	78.431	Oreochromis_niloticus
ENSCVAG00000005212	rnaseh2b	89	55.556	ENSOANG00000015537	RNASEH2B	96	55.556	Ornithorhynchus_anatinus
ENSCVAG00000005212	rnaseh2b	88	48.708	ENSOCUG00000008904	RNASEH2B	85	49.077	Oryctolagus_cuniculus
ENSCVAG00000005212	rnaseh2b	99	78.146	ENSORLG00000011850	rnaseh2b	100	78.146	Oryzias_latipes
ENSCVAG00000005212	rnaseh2b	99	78.146	ENSORLG00020012081	rnaseh2b	100	78.146	Oryzias_latipes_hni
ENSCVAG00000005212	rnaseh2b	99	77.815	ENSORLG00015015468	rnaseh2b	100	77.815	Oryzias_latipes_hsok
ENSCVAG00000005212	rnaseh2b	99	79.139	ENSOMEG00000012441	rnaseh2b	100	79.139	Oryzias_melastigma
ENSCVAG00000005212	rnaseh2b	87	51.282	ENSOGAG00000016486	RNASEH2B	91	51.282	Otolemur_garnettii
ENSCVAG00000005212	rnaseh2b	90	49.455	ENSOARG00000008701	RNASEH2B	93	49.455	Ovis_aries
ENSCVAG00000005212	rnaseh2b	87	51.292	ENSPPAG00000026374	RNASEH2B	97	46.018	Pan_paniscus
ENSCVAG00000005212	rnaseh2b	87	48.529	ENSPPRG00000012450	RNASEH2B	92	47.687	Panthera_pardus
ENSCVAG00000005212	rnaseh2b	87	48.897	ENSPTIG00000013918	RNASEH2B	97	48.897	Panthera_tigris_altaica
ENSCVAG00000005212	rnaseh2b	87	51.292	ENSPTRG00000005886	RNASEH2B	95	52.209	Pan_troglodytes
ENSCVAG00000005212	rnaseh2b	91	49.822	ENSPANG00000022424	-	90	49.822	Papio_anubis
ENSCVAG00000005212	rnaseh2b	100	68.078	ENSPKIG00000013386	rnaseh2b	100	68.078	Paramormyrops_kingsleyae
ENSCVAG00000005212	rnaseh2b	64	52.778	ENSPSIG00000002224	RNASEH2B	84	52.778	Pelodiscus_sinensis
ENSCVAG00000005212	rnaseh2b	64	76.410	ENSPMGG00000010299	rnaseh2b	95	76.410	Periophthalmus_magnuspinnatus
ENSCVAG00000005212	rnaseh2b	87	51.493	ENSPEMG00000019721	Rnaseh2b	87	52.222	Peromyscus_maniculatus_bairdii
ENSCVAG00000005212	rnaseh2b	93	52.613	ENSPCIG00000014535	-	96	52.613	Phascolarctos_cinereus
ENSCVAG00000005212	rnaseh2b	100	85.390	ENSPFOG00000016722	rnaseh2b	100	85.390	Poecilia_formosa
ENSCVAG00000005212	rnaseh2b	100	85.621	ENSPLAG00000011755	rnaseh2b	100	85.621	Poecilia_latipinna
ENSCVAG00000005212	rnaseh2b	100	85.948	ENSPMEG00000002721	rnaseh2b	100	85.948	Poecilia_mexicana
ENSCVAG00000005212	rnaseh2b	100	86.275	ENSPREG00000007737	rnaseh2b	100	86.275	Poecilia_reticulata
ENSCVAG00000005212	rnaseh2b	87	51.292	ENSPPYG00000005378	RNASEH2B	86	51.292	Pongo_abelii
ENSCVAG00000005212	rnaseh2b	87	50.923	ENSPCOG00000026623	RNASEH2B	87	50.923	Propithecus_coquereli
ENSCVAG00000005212	rnaseh2b	79	48.361	ENSPVAG00000000508	RNASEH2B	92	48.361	Pteropus_vampyrus
ENSCVAG00000005212	rnaseh2b	100	79.085	ENSPNYG00000013552	rnaseh2b	100	79.085	Pundamilia_nyererei
ENSCVAG00000005212	rnaseh2b	99	69.281	ENSPNAG00000024825	rnaseh2b	99	69.281	Pygocentrus_nattereri
ENSCVAG00000005212	rnaseh2b	90	49.821	ENSRNOG00000009192	Rnaseh2b	90	49.821	Rattus_norvegicus
ENSCVAG00000005212	rnaseh2b	90	49.462	ENSRBIG00000028928	-	89	49.819	Rhinopithecus_bieti
ENSCVAG00000005212	rnaseh2b	86	45.247	ENSRBIG00000036017	-	86	45.247	Rhinopithecus_bieti
ENSCVAG00000005212	rnaseh2b	90	49.462	ENSRROG00000018808	-	89	49.819	Rhinopithecus_roxellana
ENSCVAG00000005212	rnaseh2b	84	38.174	ENSRROG00000044915	-	94	37.959	Rhinopithecus_roxellana
ENSCVAG00000005212	rnaseh2b	90	50.181	ENSSBOG00000008081	RNASEH2B	96	51.493	Saimiri_boliviensis_boliviensis
ENSCVAG00000005212	rnaseh2b	100	55.484	ENSSHAG00000016190	RNASEH2B	100	56.169	Sarcophilus_harrisii
ENSCVAG00000005212	rnaseh2b	99	69.608	ENSSFOG00015010190	rnaseh2b	100	69.608	Scleropages_formosus
ENSCVAG00000005212	rnaseh2b	100	78.105	ENSSMAG00000001546	rnaseh2b	100	78.105	Scophthalmus_maximus
ENSCVAG00000005212	rnaseh2b	100	83.333	ENSSDUG00000007567	rnaseh2b	100	83.333	Seriola_dumerili
ENSCVAG00000005212	rnaseh2b	100	81.759	ENSSLDG00000012485	rnaseh2b	100	81.759	Seriola_lalandi_dorsalis
ENSCVAG00000005212	rnaseh2b	86	52.652	ENSSPUG00000006745	-	95	52.652	Sphenodon_punctatus
ENSCVAG00000005212	rnaseh2b	100	82.353	ENSSPAG00000020926	rnaseh2b	100	82.353	Stegastes_partitus
ENSCVAG00000005212	rnaseh2b	87	50.373	ENSSSCG00000024385	RNASEH2B	95	51.220	Sus_scrofa
ENSCVAG00000005212	rnaseh2b	88	62.132	ENSTGUG00000012104	RNASEH2B	99	62.132	Taeniopygia_guttata
ENSCVAG00000005212	rnaseh2b	100	77.778	ENSTRUG00000015098	rnaseh2b	100	77.778	Takifugu_rubripes
ENSCVAG00000005212	rnaseh2b	100	74.351	ENSTNIG00000013861	rnaseh2b	100	74.351	Tetraodon_nigroviridis
ENSCVAG00000005212	rnaseh2b	90	44.964	ENSTTRG00000010761	RNASEH2B	90	44.964	Tursiops_truncatus
ENSCVAG00000005212	rnaseh2b	90	49.819	ENSUAMG00000022849	RNASEH2B	96	50.746	Ursus_americanus
ENSCVAG00000005212	rnaseh2b	90	49.097	ENSUMAG00000018556	RNASEH2B	96	50.000	Ursus_maritimus
ENSCVAG00000005212	rnaseh2b	87	51.673	ENSVPAG00000005679	RNASEH2B	92	51.673	Vicugna_pacos
ENSCVAG00000005212	rnaseh2b	90	50.542	ENSVVUG00000024015	RNASEH2B	83	50.542	Vulpes_vulpes
ENSCVAG00000005212	rnaseh2b	99	53.571	ENSXETG00000020720	rnaseh2b	100	53.571	Xenopus_tropicalis
ENSCVAG00000005212	rnaseh2b	100	84.039	ENSXCOG00000018732	rnaseh2b	100	84.039	Xiphophorus_couchianus
ENSCVAG00000005212	rnaseh2b	100	85.948	ENSXMAG00000022554	rnaseh2b	100	85.948	Xiphophorus_maculatus