EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005337 (Gene tree)
Gene ID: 107082710
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 13464 bases
Position: chrKL652559.1:1444920-1458383
Accession: 107082710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022562	RRM_1	PF00076.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008977	-	4524	XM_015371506	ENSCVAP00000022562	1012 (aa)	XP_015226992	UPI000742A7D6

Gene Model

Click here to download ENSCVAG00000005337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005337	matr3l1.1	74	44.000	ENSCVAG00000005349	-	56	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005337	matr3l1.1	70	34.601	ENSG00000015479	MATR3	100	36.585	Homo_sapiens
ENSCVAG00000005337	matr3l1.1	93	36.000	ENSAMEG00000011347	-	82	39.806	Ailuropoda_melanoleuca
ENSCVAG00000005337	matr3l1.1	91	35.918	ENSAPLG00000008118	-	85	39.227	Anas_platyrhynchos
ENSCVAG00000005337	matr3l1.1	88	59.259	ENSACAG00000016233	-	77	59.259	Anolis_carolinensis
ENSCVAG00000005337	matr3l1.1	58	32.075	ENSANAG00000024654	-	81	32.075	Aotus_nancymaae
ENSCVAG00000005337	matr3l1.1	94	34.940	ENSANAG00000022951	-	78	46.154	Aotus_nancymaae
ENSCVAG00000005337	matr3l1.1	74	48.296	ENSACLG00000015903	matr3l1.1	94	59.319	Astatotilapia_calliptera
ENSCVAG00000005337	matr3l1.1	99	43.868	ENSAMXG00000010685	matr3l1.1	99	42.525	Astyanax_mexicanus
ENSCVAG00000005337	matr3l1.1	99	44.395	ENSAMXG00000010681	matr3l1.1	99	43.656	Astyanax_mexicanus
ENSCVAG00000005337	matr3l1.1	81	36.000	ENSBTAG00000006756	MATR3	76	30.508	Bos_taurus
ENSCVAG00000005337	matr3l1.1	76	38.000	ENSCJAG00000006888	-	82	39.000	Callithrix_jacchus
ENSCVAG00000005337	matr3l1.1	85	53.704	ENSCAFG00000001345	MATR3	81	53.704	Canis_familiaris
ENSCVAG00000005337	matr3l1.1	86	50.000	ENSCAFG00020010504	-	81	50.000	Canis_lupus_dingo
ENSCVAG00000005337	matr3l1.1	57	38.835	ENSCHIG00000025746	-	79	39.806	Capra_hircus
ENSCVAG00000005337	matr3l1.1	81	30.396	ENSTSYG00000011028	-	73	32.450	Carlito_syrichta
ENSCVAG00000005337	matr3l1.1	81	38.835	ENSCPOG00000014076	-	82	38.835	Cavia_porcellus
ENSCVAG00000005337	matr3l1.1	81	34.940	ENSCCAG00000025074	-	76	31.900	Cebus_capucinus
ENSCVAG00000005337	matr3l1.1	81	31.081	ENSCLAG00000015998	-	84	36.170	Chinchilla_lanigera
ENSCVAG00000005337	matr3l1.1	56	37.143	ENSCSAG00000013075	-	68	37.719	Chlorocebus_sabaeus
ENSCVAG00000005337	matr3l1.1	93	35.510	ENSCPBG00000006303	-	83	40.909	Chrysemys_picta_bellii
ENSCVAG00000005337	matr3l1.1	82	34.601	ENSCANG00000028224	-	83	37.719	Colobus_angolensis_palliatus
ENSCVAG00000005337	matr3l1.1	57	38.000	ENSCGRG00001020227	Matr3	85	38.000	Cricetulus_griseus_chok1gshd
ENSCVAG00000005337	matr3l1.1	57	38.000	ENSCGRG00000011298	Matr3	79	39.000	Cricetulus_griseus_crigri
ENSCVAG00000005337	matr3l1.1	99	50.705	ENSCSEG00000012682	matr3l1.1	99	51.115	Cynoglossus_semilaevis
ENSCVAG00000005337	matr3l1.1	93	34.340	ENSDNOG00000037723	-	82	40.777	Dasypus_novemcinctus
ENSCVAG00000005337	matr3l1.1	78	38.835	ENSEASG00005020857	-	79	38.835	Equus_asinus_asinus
ENSCVAG00000005337	matr3l1.1	81	30.787	ENSECAG00000012882	MATR3	79	38.835	Equus_caballus
ENSCVAG00000005337	matr3l1.1	99	46.926	ENSELUG00000021848	matr3l1.1	99	46.101	Esox_lucius
ENSCVAG00000005337	matr3l1.1	91	30.909	ENSELUG00000021651	si:ch211-271b14.1	94	32.381	Esox_lucius
ENSCVAG00000005337	matr3l1.1	78	38.835	ENSFCAG00000021911	-	79	38.835	Felis_catus
ENSCVAG00000005337	matr3l1.1	64	59.259	ENSFALG00000003071	-	76	59.259	Ficedula_albicollis
ENSCVAG00000005337	matr3l1.1	78	31.193	ENSFDAG00000017675	-	59	53.704	Fukomys_damarensis
ENSCVAG00000005337	matr3l1.1	91	35.918	ENSGALG00000002478	MATR3	81	42.157	Gallus_gallus
ENSCVAG00000005337	matr3l1.1	93	35.510	ENSGAGG00000011386	-	83	40.000	Gopherus_agassizii
ENSCVAG00000005337	matr3l1.1	94	34.601	ENSGGOG00000007308	-	83	37.719	Gorilla_gorilla
ENSCVAG00000005337	matr3l1.1	81	30.856	ENSHGLG00000004673	MATR3	74	36.170	Heterocephalus_glaber_female
ENSCVAG00000005337	matr3l1.1	80	52.941	ENSHCOG00000013223	matr3l1.1	99	49.097	Hippocampus_comes
ENSCVAG00000005337	matr3l1.1	68	38.119	ENSIPUG00000020686	MATR3	95	35.644	Ictalurus_punctatus
ENSCVAG00000005337	matr3l1.1	81	30.787	ENSSTOG00000014746	-	83	41.573	Ictidomys_tridecemlineatus
ENSCVAG00000005337	matr3l1.1	53	47.692	ENSJJAG00000021710	-	79	47.692	Jaculus_jaculus
ENSCVAG00000005337	matr3l1.1	82	53.968	ENSLACG00000006743	-	79	52.308	Latimeria_chalumnae
ENSCVAG00000005337	matr3l1.1	82	34.601	ENSMFAG00000000634	-	83	37.719	Macaca_fascicularis
ENSCVAG00000005337	matr3l1.1	82	34.601	ENSMMUG00000016741	MATR3	83	37.719	Macaca_mulatta
ENSCVAG00000005337	matr3l1.1	62	36.574	ENSMMUG00000015963	-	71	36.574	Macaca_mulatta
ENSCVAG00000005337	matr3l1.1	75	38.889	ENSMNEG00000042856	-	76	38.889	Macaca_nemestrina
ENSCVAG00000005337	matr3l1.1	75	38.889	ENSMLEG00000041178	-	76	38.889	Mandrillus_leucophaeus
ENSCVAG00000005337	matr3l1.1	87	48.352	ENSMGAG00000001331	-	79	48.352	Meleagris_gallopavo
ENSCVAG00000005337	matr3l1.1	57	39.000	ENSMAUG00000011647	Matr3	85	33.548	Mesocricetus_auratus
ENSCVAG00000005337	matr3l1.1	80	36.842	ENSMOCG00000015711	Matr3	82	36.574	Microtus_ochrogaster
ENSCVAG00000005337	matr3l1.1	79	32.071	ENSMODG00000011925	-	74	53.704	Monodelphis_domestica
ENSCVAG00000005337	matr3l1.1	83	30.921	MGP_CAROLIEiJ_G0022108	Matr3	79	47.692	Mus_caroli
ENSCVAG00000005337	matr3l1.1	83	30.921	ENSMUSG00000037236	Matr3	85	33.113	Mus_musculus
ENSCVAG00000005337	matr3l1.1	83	31.498	MGP_PahariEiJ_G0018842	Matr3	79	47.692	Mus_pahari
ENSCVAG00000005337	matr3l1.1	83	31.140	MGP_SPRETEiJ_G0023020	Matr3	87	37.719	Mus_spretus
ENSCVAG00000005337	matr3l1.1	90	38.835	ENSMPUG00000009297	-	86	39.806	Mustela_putorius_furo
ENSCVAG00000005337	matr3l1.1	57	36.842	ENSMLUG00000005798	-	80	36.842	Myotis_lucifugus
ENSCVAG00000005337	matr3l1.1	82	30.396	ENSNGAG00000017452	Matr3	94	33.775	Nannospalax_galili
ENSCVAG00000005337	matr3l1.1	70	34.601	ENSNLEG00000009093	-	77	33.113	Nomascus_leucogenys
ENSCVAG00000005337	matr3l1.1	74	53.704	ENSOPRG00000016511	-	63	53.704	Ochotona_princeps
ENSCVAG00000005337	matr3l1.1	81	30.580	ENSODEG00000003015	-	77	53.704	Octodon_degus
ENSCVAG00000005337	matr3l1.1	81	31.603	ENSOCUG00000026311	MATR3	79	38.835	Oryctolagus_cuniculus
ENSCVAG00000005337	matr3l1.1	73	58.170	ENSORLG00000025674	matr3l1.1	99	58.801	Oryzias_latipes
ENSCVAG00000005337	matr3l1.1	99	57.875	ENSORLG00020009362	matr3l1.1	99	58.739	Oryzias_latipes_hni
ENSCVAG00000005337	matr3l1.1	99	58.020	ENSORLG00015018551	matr3l1.1	99	58.596	Oryzias_latipes_hsok
ENSCVAG00000005337	matr3l1.1	99	58.403	ENSOMEG00000022287	matr3l1.1	99	58.840	Oryzias_melastigma
ENSCVAG00000005337	matr3l1.1	57	36.842	ENSOGAG00000010607	-	85	33.113	Otolemur_garnettii
ENSCVAG00000005337	matr3l1.1	57	38.835	ENSOARG00000016931	-	78	39.806	Ovis_aries
ENSCVAG00000005337	matr3l1.1	94	34.601	ENSPPAG00000001418	-	83	37.719	Pan_paniscus
ENSCVAG00000005337	matr3l1.1	68	31.567	ENSPPAG00000026720	-	99	31.944	Pan_paniscus
ENSCVAG00000005337	matr3l1.1	78	38.835	ENSPPRG00000008004	-	79	39.806	Panthera_pardus
ENSCVAG00000005337	matr3l1.1	78	38.835	ENSPTIG00000010711	-	82	38.835	Panthera_tigris_altaica
ENSCVAG00000005337	matr3l1.1	94	34.601	ENSPTRG00000017294	MATR3	83	37.719	Pan_troglodytes
ENSCVAG00000005337	matr3l1.1	82	34.601	ENSPANG00000012018	-	83	37.719	Papio_anubis
ENSCVAG00000005337	matr3l1.1	99	44.444	ENSPKIG00000000333	matr3l1.1	100	44.034	Paramormyrops_kingsleyae
ENSCVAG00000005337	matr3l1.1	93	35.918	ENSPSIG00000014598	-	82	39.623	Pelodiscus_sinensis
ENSCVAG00000005337	matr3l1.1	82	30.719	ENSPEMG00000020679	Matr3	72	37.719	Peromyscus_maniculatus_bairdii
ENSCVAG00000005337	matr3l1.1	82	34.601	ENSPPYG00000015835	-	83	37.719	Pongo_abelii
ENSCVAG00000005337	matr3l1.1	82	30.752	ENSPCOG00000025718	-	75	33.113	Propithecus_coquereli
ENSCVAG00000005337	matr3l1.1	80	34.457	ENSPVAG00000015431	-	83	38.776	Pteropus_vampyrus
ENSCVAG00000005337	matr3l1.1	54	63.144	ENSPNYG00000015855	-	99	64.402	Pundamilia_nyererei
ENSCVAG00000005337	matr3l1.1	82	30.973	ENSRNOG00000019875	Matr3	75	47.692	Rattus_norvegicus
ENSCVAG00000005337	matr3l1.1	81	30.531	ENSRROG00000043949	-	80	37.719	Rhinopithecus_roxellana
ENSCVAG00000005337	matr3l1.1	81	34.601	ENSRROG00000039415	-	83	37.719	Rhinopithecus_roxellana
ENSCVAG00000005337	matr3l1.1	94	34.940	ENSSBOG00000030159	-	83	36.842	Saimiri_boliviensis_boliviensis
ENSCVAG00000005337	matr3l1.1	79	30.958	ENSSHAG00000010331	-	74	55.556	Sarcophilus_harrisii
ENSCVAG00000005337	matr3l1.1	58	43.873	ENSSFOG00015001838	-	92	41.587	Scleropages_formosus
ENSCVAG00000005337	matr3l1.1	84	40.678	ENSSPUG00000019236	-	82	40.678	Sphenodon_punctatus
ENSCVAG00000005337	matr3l1.1	90	38.835	ENSSSCG00000014343	-	86	39.806	Sus_scrofa
ENSCVAG00000005337	matr3l1.1	78	59.259	ENSTGUG00000014568	MATR3	76	59.259	Taeniopygia_guttata
ENSCVAG00000005337	matr3l1.1	62	53.168	ENSTRUG00000001692	-	94	50.134	Takifugu_rubripes
ENSCVAG00000005337	matr3l1.1	93	46.377	ENSTNIG00000003166	matr3l1.1	99	56.267	Tetraodon_nigroviridis
ENSCVAG00000005337	matr3l1.1	69	36.000	ENSUAMG00000000097	-	68	36.574	Ursus_americanus
ENSCVAG00000005337	matr3l1.1	89	40.449	ENSUMAG00000015808	-	86	38.835	Ursus_maritimus
ENSCVAG00000005337	matr3l1.1	93	35.223	ENSVPAG00000006337	-	67	39.806	Vicugna_pacos
ENSCVAG00000005337	matr3l1.1	78	38.835	ENSVVUG00000020287	-	72	38.835	Vulpes_vulpes
ENSCVAG00000005337	matr3l1.1	90	55.769	ENSXETG00000003838	matr3	82	51.562	Xenopus_tropicalis
ENSCVAG00000005337	matr3l1.1	75	58.042	ENSXMAG00000014107	-	89	58.042	Xiphophorus_maculatus