EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005349 (Gene tree)
Gene ID: 107082708
Gene Symbol: -
Alias: -
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13529 bases
Position: chrKL652559.1:1432772-1446300
Accession: 107082708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004079	zf-met	PF12874.7	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008954	-	4291	XM_015371503	ENSCVAP00000004079	1190 (aa)	XP_015226989	UPI0007429833

Gene Model

Click here to download ENSCVAG00000005349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005349	-	56	44.000	ENSCVAG00000005337	matr3l1.1	74	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005349	-	87	51.852	ENSAPEG00000003827	-	100	42.285	Amphiprion_percula
ENSCVAG00000005349	-	80	68.182	ENSATEG00000018501	-	82	40.997	Anabas_testudineus
ENSCVAG00000005349	-	51	49.254	ENSAMXG00000010682	-	76	69.048	Astyanax_mexicanus
ENSCVAG00000005349	-	76	36.548	ENSELUG00000022000	-	79	37.459	Esox_lucius
ENSCVAG00000005349	-	100	45.503	ENSKMAG00000007525	-	100	45.345	Kryptolebias_marmoratus
ENSCVAG00000005349	-	61	37.055	ENSONIG00000004400	-	98	37.459	Oreochromis_niloticus
ENSCVAG00000005349	-	88	77.966	ENSORLG00000023325	-	95	75.806	Oryzias_latipes
ENSCVAG00000005349	-	85	79.661	ENSORLG00020009274	-	95	77.419	Oryzias_latipes_hni
ENSCVAG00000005349	-	75	47.009	ENSORLG00015018491	-	83	46.010	Oryzias_latipes_hsok
ENSCVAG00000005349	-	90	50.108	ENSOMEG00000022255	-	86	79.032	Oryzias_melastigma