EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005376 (Gene tree)
Gene ID: 107099134
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 36248 bases
Position: chrKL653339.1:196107-232354
Accession: 107099134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022537	ResIII	PF04851.15	7.4e-08	1	1
ENSCVAP00000004047	ResIII	PF04851.15	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000009014	-	9170	XM_015397134	ENSCVAP00000004047	1469 (aa)	XP_015252620	-
ENSCVAT00000009042	-	4176	-	ENSCVAP00000022537	1391 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005376	-	98	58.832	ENSCVAG00000017887	rad54l2	93	60.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005376	-	95	59.045	ENSG00000164080	RAD54L2	87	64.931	Homo_sapiens
ENSCVAG00000005376	-	100	79.626	ENSAPOG00000024141	-	100	79.760	Acanthochromis_polyacanthus
ENSCVAG00000005376	-	95	59.084	ENSAMEG00000009326	RAD54L2	86	61.704	Ailuropoda_melanoleuca
ENSCVAG00000005376	-	87	63.162	ENSACIG00000018079	rad54l2	89	63.805	Amphilophus_citrinellus
ENSCVAG00000005376	-	93	75.151	ENSACIG00000015932	-	100	74.410	Amphilophus_citrinellus
ENSCVAG00000005376	-	100	79.236	ENSAOCG00000022380	-	100	79.092	Amphiprion_ocellaris
ENSCVAG00000005376	-	99	59.699	ENSATEG00000009346	rad54l2	95	61.111	Anabas_testudineus
ENSCVAG00000005376	-	100	78.223	ENSATEG00000006641	-	100	78.357	Anabas_testudineus
ENSCVAG00000005376	-	97	59.322	ENSAPLG00000002121	RAD54L2	95	60.028	Anas_platyrhynchos
ENSCVAG00000005376	-	76	69.601	ENSACAG00000015883	RAD54L2	93	64.701	Anolis_carolinensis
ENSCVAG00000005376	-	95	58.683	ENSANAG00000025396	RAD54L2	84	62.589	Aotus_nancymaae
ENSCVAG00000005376	-	99	58.804	ENSACLG00000019111	rad54l2	89	64.767	Astatotilapia_calliptera
ENSCVAG00000005376	-	96	78.294	ENSACLG00000018296	-	100	77.488	Astatotilapia_calliptera
ENSCVAG00000005376	-	97	60.956	ENSAMXG00000013807	rad54l2	94	60.799	Astyanax_mexicanus
ENSCVAG00000005376	-	95	59.084	ENSBTAG00000032253	RAD54L2	85	62.807	Bos_taurus
ENSCVAG00000005376	-	95	58.900	ENSCJAG00000005575	RAD54L2	89	62.767	Callithrix_jacchus
ENSCVAG00000005376	-	95	58.939	ENSCAFG00000010120	RAD54L2	84	62.887	Canis_familiaris
ENSCVAG00000005376	-	95	58.939	ENSCAFG00020022320	RAD54L2	84	62.887	Canis_lupus_dingo
ENSCVAG00000005376	-	95	58.747	ENSCHIG00000008830	RAD54L2	84	62.559	Capra_hircus
ENSCVAG00000005376	-	95	58.666	ENSTSYG00000013200	RAD54L2	84	62.352	Carlito_syrichta
ENSCVAG00000005376	-	85	62.211	ENSCAPG00000016465	RAD54L2	80	62.982	Cavia_aperea
ENSCVAG00000005376	-	95	58.866	ENSCPOG00000005941	RAD54L2	84	62.728	Cavia_porcellus
ENSCVAG00000005376	-	87	58.927	ENSCCAG00000024465	RAD54L2	85	62.201	Cebus_capucinus
ENSCVAG00000005376	-	95	58.900	ENSCATG00000039891	RAD54L2	85	62.904	Cercocebus_atys
ENSCVAG00000005376	-	95	58.917	ENSCLAG00000008059	RAD54L2	84	62.835	Chinchilla_lanigera
ENSCVAG00000005376	-	95	58.900	ENSCSAG00000014027	RAD54L2	84	62.904	Chlorocebus_sabaeus
ENSCVAG00000005376	-	97	59.079	ENSCPBG00000016624	RAD54L2	98	59.239	Chrysemys_picta_bellii
ENSCVAG00000005376	-	71	50.443	ENSCING00000009208	-	95	50.095	Ciona_intestinalis
ENSCVAG00000005376	-	95	58.828	ENSCANG00000036093	RAD54L2	85	62.826	Colobus_angolensis_palliatus
ENSCVAG00000005376	-	93	59.614	ENSCGRG00000007921	Rad54l2	84	62.767	Cricetulus_griseus_crigri
ENSCVAG00000005376	-	87	75.604	ENSCSEG00000006115	-	98	75.426	Cynoglossus_semilaevis
ENSCVAG00000005376	-	99	56.140	ENSCSEG00000001740	rad54l2	96	56.216	Cynoglossus_semilaevis
ENSCVAG00000005376	-	97	61.571	ENSDARG00000063031	rad54l2	95	63.293	Danio_rerio
ENSCVAG00000005376	-	96	57.959	ENSDNOG00000017359	RAD54L2	93	59.195	Dasypus_novemcinctus
ENSCVAG00000005376	-	87	69.298	ENSDORG00000000651	Rad54l2	82	70.164	Dipodomys_ordii
ENSCVAG00000005376	-	60	59.198	FBgn0034976	CG4049	58	50.893	Drosophila_melanogaster
ENSCVAG00000005376	-	94	57.436	ENSETEG00000013290	RAD54L2	97	58.425	Echinops_telfairi
ENSCVAG00000005376	-	72	56.641	ENSEBUG00000001591	rad54l2	74	59.570	Eptatretus_burgeri
ENSCVAG00000005376	-	95	58.866	ENSEASG00005012868	RAD54L2	84	62.728	Equus_asinus_asinus
ENSCVAG00000005376	-	95	58.794	ENSECAG00000014759	RAD54L2	84	62.728	Equus_caballus
ENSCVAG00000005376	-	82	67.251	ENSEEUG00000001759	RAD54L2	77	67.251	Erinaceus_europaeus
ENSCVAG00000005376	-	97	67.661	ENSELUG00000011246	RAD54L2	97	67.760	Esox_lucius
ENSCVAG00000005376	-	95	58.939	ENSFCAG00000018563	RAD54L2	84	62.887	Felis_catus
ENSCVAG00000005376	-	84	65.157	ENSFALG00000008938	RAD54L2	95	63.951	Ficedula_albicollis
ENSCVAG00000005376	-	95	58.939	ENSFDAG00000017084	RAD54L2	84	62.728	Fukomys_damarensis
ENSCVAG00000005376	-	97	59.929	ENSFHEG00000023241	rad54l2	95	59.188	Fundulus_heteroclitus
ENSCVAG00000005376	-	100	86.293	ENSFHEG00000017845	-	99	87.508	Fundulus_heteroclitus
ENSCVAG00000005376	-	93	60.586	ENSGMOG00000010674	rad54l2	98	60.873	Gadus_morhua
ENSCVAG00000005376	-	97	59.435	ENSGALG00000003243	RAD54L2	93	59.833	Gallus_gallus
ENSCVAG00000005376	-	97	59.724	ENSGAFG00000021535	rad54l2	93	59.860	Gambusia_affinis
ENSCVAG00000005376	-	100	84.932	ENSGAFG00000002396	-	100	85.878	Gambusia_affinis
ENSCVAG00000005376	-	88	77.812	ENSGACG00000005642	-	99	77.812	Gasterosteus_aculeatus
ENSCVAG00000005376	-	97	60.371	ENSGACG00000001558	rad54l2	97	61.043	Gasterosteus_aculeatus
ENSCVAG00000005376	-	95	60.993	ENSGAGG00000020971	RAD54L2	94	60.917	Gopherus_agassizii
ENSCVAG00000005376	-	95	58.973	ENSGGOG00000010032	RAD54L2	85	62.983	Gorilla_gorilla
ENSCVAG00000005376	-	96	78.363	ENSHBUG00000018930	-	100	77.555	Haplochromis_burtoni
ENSCVAG00000005376	-	99	58.804	ENSHBUG00000012480	rad54l2	93	60.550	Haplochromis_burtoni
ENSCVAG00000005376	-	95	58.973	ENSHGLG00000012116	RAD54L2	84	62.747	Heterocephalus_glaber_female
ENSCVAG00000005376	-	95	58.973	ENSHGLG00100007205	RAD54L2	84	62.747	Heterocephalus_glaber_male
ENSCVAG00000005376	-	99	70.308	ENSHCOG00000006741	-	100	70.114	Hippocampus_comes
ENSCVAG00000005376	-	99	56.728	ENSHCOG00000007601	rad54l2	92	57.891	Hippocampus_comes
ENSCVAG00000005376	-	97	58.321	ENSIPUG00000019664	rad54l2	92	58.987	Ictalurus_punctatus
ENSCVAG00000005376	-	98	57.406	ENSIPUG00000024973	-	88	63.296	Ictalurus_punctatus
ENSCVAG00000005376	-	97	57.801	ENSSTOG00000010014	RAD54L2	88	60.509	Ictidomys_tridecemlineatus
ENSCVAG00000005376	-	95	58.704	ENSJJAG00000014332	Rad54l2	84	62.490	Jaculus_jaculus
ENSCVAG00000005376	-	99	80.354	ENSKMAG00000002931	-	98	80.354	Kryptolebias_marmoratus
ENSCVAG00000005376	-	99	57.335	ENSKMAG00000001976	rad54l2	94	60.029	Kryptolebias_marmoratus
ENSCVAG00000005376	-	97	59.885	ENSLBEG00000018779	rad54l2	93	60.856	Labrus_bergylta
ENSCVAG00000005376	-	89	76.316	ENSLBEG00000008534	-	98	76.826	Labrus_bergylta
ENSCVAG00000005376	-	96	56.454	ENSLACG00000016004	RAD54L2	96	56.692	Latimeria_chalumnae
ENSCVAG00000005376	-	71	73.746	ENSLOCG00000014222	rad54l2	99	72.056	Lepisosteus_oculatus
ENSCVAG00000005376	-	95	59.078	ENSLAFG00000005966	RAD54L2	86	61.265	Loxodonta_africana
ENSCVAG00000005376	-	95	58.973	ENSMFAG00000041836	RAD54L2	85	62.983	Macaca_fascicularis
ENSCVAG00000005376	-	95	58.900	ENSMMUG00000012002	RAD54L2	84	62.904	Macaca_mulatta
ENSCVAG00000005376	-	95	58.973	ENSMNEG00000035063	RAD54L2	86	62.983	Macaca_nemestrina
ENSCVAG00000005376	-	95	58.973	ENSMLEG00000034668	RAD54L2	85	62.983	Mandrillus_leucophaeus
ENSCVAG00000005376	-	91	69.797	ENSMAMG00000023761	rad54l2	96	66.836	Mastacembelus_armatus
ENSCVAG00000005376	-	100	76.676	ENSMAMG00000015321	-	100	76.913	Mastacembelus_armatus
ENSCVAG00000005376	-	96	78.155	ENSMZEG00005021308	-	100	77.355	Maylandia_zebra
ENSCVAG00000005376	-	99	59.420	ENSMZEG00005012584	rad54l2	96	59.945	Maylandia_zebra
ENSCVAG00000005376	-	98	59.590	ENSMGAG00000002911	RAD54L2	89	61.629	Meleagris_gallopavo
ENSCVAG00000005376	-	73	67.769	ENSMAUG00000011651	Rad54l2	94	68.411	Mesocricetus_auratus
ENSCVAG00000005376	-	98	57.374	ENSMICG00000002777	RAD54L2	86	62.698	Microcebus_murinus
ENSCVAG00000005376	-	95	58.969	ENSMOCG00000022448	Rad54l2	89	60.876	Microtus_ochrogaster
ENSCVAG00000005376	-	97	59.827	ENSMMOG00000021709	rad54l2	92	61.017	Mola_mola
ENSCVAG00000005376	-	93	76.753	ENSMMOG00000016901	-	99	75.790	Mola_mola
ENSCVAG00000005376	-	94	61.241	ENSMODG00000011850	RAD54L2	95	61.887	Monodelphis_domestica
ENSCVAG00000005376	-	89	76.232	ENSMALG00000015084	-	97	82.675	Monopterus_albus
ENSCVAG00000005376	-	94	59.284	MGP_CAROLIEiJ_G0032634	Rad54l2	87	60.873	Mus_caroli
ENSCVAG00000005376	-	94	59.211	ENSMUSG00000040661	Rad54l2	87	60.798	Mus_musculus
ENSCVAG00000005376	-	94	58.918	MGP_PahariEiJ_G0015502	Rad54l2	87	60.497	Mus_pahari
ENSCVAG00000005376	-	94	59.211	MGP_SPRETEiJ_G0033779	Rad54l2	87	60.798	Mus_spretus
ENSCVAG00000005376	-	97	58.173	ENSMPUG00000011865	RAD54L2	86	61.444	Mustela_putorius_furo
ENSCVAG00000005376	-	93	60.030	ENSMLUG00000004605	RAD54L2	89	60.767	Myotis_lucifugus
ENSCVAG00000005376	-	95	58.995	ENSNGAG00000015629	Rad54l2	84	62.807	Nannospalax_galili
ENSCVAG00000005376	-	79	68.194	ENSNBRG00000001937	rad54l2	94	63.349	Neolamprologus_brichardi
ENSCVAG00000005376	-	96	78.225	ENSNBRG00000022847	-	100	77.488	Neolamprologus_brichardi
ENSCVAG00000005376	-	95	58.900	ENSNLEG00000007038	RAD54L2	86	62.983	Nomascus_leucogenys
ENSCVAG00000005376	-	92	72.472	ENSMEUG00000009835	RAD54L2	89	72.472	Notamacropus_eugenii
ENSCVAG00000005376	-	95	58.794	ENSODEG00000018266	RAD54L2	84	62.569	Octodon_degus
ENSCVAG00000005376	-	96	78.936	ENSONIG00000001663	-	100	77.208	Oreochromis_niloticus
ENSCVAG00000005376	-	99	60.167	ENSONIG00000014468	rad54l2	94	61.333	Oreochromis_niloticus
ENSCVAG00000005376	-	98	59.314	ENSOANG00000012793	RAD54L2	90	62.611	Ornithorhynchus_anatinus
ENSCVAG00000005376	-	95	59.084	ENSOCUG00000017577	RAD54L2	84	62.966	Oryctolagus_cuniculus
ENSCVAG00000005376	-	89	71.680	ENSORLG00000002276	rad54l2	95	57.763	Oryzias_latipes
ENSCVAG00000005376	-	96	76.294	ENSORLG00000002714	-	96	76.869	Oryzias_latipes
ENSCVAG00000005376	-	99	58.567	ENSORLG00020003470	rad54l2	96	58.485	Oryzias_latipes_hni
ENSCVAG00000005376	-	96	76.137	ENSORLG00020019256	-	96	76.783	Oryzias_latipes_hni
ENSCVAG00000005376	-	99	58.589	ENSORLG00015021530	rad54l2	95	58.458	Oryzias_latipes_hsok
ENSCVAG00000005376	-	96	76.643	ENSORLG00015013408	-	96	77.358	Oryzias_latipes_hsok
ENSCVAG00000005376	-	99	74.747	ENSOMEG00000008216	-	99	75.530	Oryzias_melastigma
ENSCVAG00000005376	-	99	58.554	ENSOMEG00000005597	rad54l2	92	58.520	Oryzias_melastigma
ENSCVAG00000005376	-	77	61.518	ENSOGAG00000012442	RAD54L2	88	64.498	Otolemur_garnettii
ENSCVAG00000005376	-	95	58.870	ENSOARG00000007264	RAD54L2	84	62.717	Ovis_aries
ENSCVAG00000005376	-	95	58.973	ENSPPAG00000038472	RAD54L2	85	62.983	Pan_paniscus
ENSCVAG00000005376	-	95	58.939	ENSPPRG00000010212	RAD54L2	84	62.887	Panthera_pardus
ENSCVAG00000005376	-	95	58.939	ENSPTIG00000002240	RAD54L2	84	62.887	Panthera_tigris_altaica
ENSCVAG00000005376	-	95	58.973	ENSPTRG00000014974	RAD54L2	85	62.983	Pan_troglodytes
ENSCVAG00000005376	-	95	58.973	ENSPANG00000000857	RAD54L2	85	62.983	Papio_anubis
ENSCVAG00000005376	-	99	65.105	ENSPKIG00000001065	rad54l2	98	65.718	Paramormyrops_kingsleyae
ENSCVAG00000005376	-	70	71.471	ENSPSIG00000014346	RAD54L2	96	67.642	Pelodiscus_sinensis
ENSCVAG00000005376	-	97	66.955	ENSPMGG00000000641	-	97	68.260	Periophthalmus_magnuspinnatus
ENSCVAG00000005376	-	89	60.502	ENSPMGG00000002208	rad54l2	96	62.024	Periophthalmus_magnuspinnatus
ENSCVAG00000005376	-	95	58.896	ENSPEMG00000012051	Rad54l2	84	62.748	Peromyscus_maniculatus_bairdii
ENSCVAG00000005376	-	93	60.000	ENSPCIG00000018143	RAD54L2	95	61.727	Phascolarctos_cinereus
ENSCVAG00000005376	-	98	86.721	ENSPFOG00000000197	-	100	86.456	Poecilia_formosa
ENSCVAG00000005376	-	97	59.659	ENSPFOG00000018644	rad54l2	94	59.532	Poecilia_formosa
ENSCVAG00000005376	-	97	87.255	ENSPLAG00000013908	-	100	86.226	Poecilia_latipinna
ENSCVAG00000005376	-	97	59.727	ENSPLAG00000006015	rad54l2	92	60.057	Poecilia_latipinna
ENSCVAG00000005376	-	97	60.058	ENSPMEG00000021535	rad54l2	94	59.670	Poecilia_mexicana
ENSCVAG00000005376	-	98	86.311	ENSPMEG00000009878	-	100	86.051	Poecilia_mexicana
ENSCVAG00000005376	-	97	87.045	ENSPREG00000013377	RAD54L2	99	86.485	Poecilia_reticulata
ENSCVAG00000005376	-	96	58.613	ENSPREG00000008628	rad54l2	97	60.667	Poecilia_reticulata
ENSCVAG00000005376	-	95	58.973	ENSPPYG00000013831	RAD54L2	91	61.065	Pongo_abelii
ENSCVAG00000005376	-	76	60.700	ENSPCAG00000011952	RAD54L2	80	60.700	Procavia_capensis
ENSCVAG00000005376	-	99	56.548	ENSPCOG00000015983	RAD54L2	86	61.521	Propithecus_coquereli
ENSCVAG00000005376	-	78	68.178	ENSPNYG00000020693	rad54l2	94	63.902	Pundamilia_nyererei
ENSCVAG00000005376	-	96	78.294	ENSPNYG00000011435	-	100	77.488	Pundamilia_nyererei
ENSCVAG00000005376	-	97	61.147	ENSPNAG00000006451	rad54l2	96	60.794	Pygocentrus_nattereri
ENSCVAG00000005376	-	100	63.055	ENSPNAG00000011583	-	97	64.656	Pygocentrus_nattereri
ENSCVAG00000005376	-	95	55.887	ENSRNOG00000013570	Rad54l2	84	59.415	Rattus_norvegicus
ENSCVAG00000005376	-	72	66.182	ENSRNOG00000049489	LOC102552166	94	66.829	Rattus_norvegicus
ENSCVAG00000005376	-	95	58.828	ENSRBIG00000032434	RAD54L2	89	64.298	Rhinopithecus_bieti
ENSCVAG00000005376	-	95	58.828	ENSRROG00000042309	RAD54L2	86	62.826	Rhinopithecus_roxellana
ENSCVAG00000005376	-	95	58.828	ENSSBOG00000002139	RAD54L2	84	62.747	Saimiri_boliviensis_boliviensis
ENSCVAG00000005376	-	98	59.818	ENSSHAG00000008604	RAD54L2	90	62.592	Sarcophilus_harrisii
ENSCVAG00000005376	-	99	66.128	ENSSFOG00015019014	rad54l2	98	67.246	Scleropages_formosus
ENSCVAG00000005376	-	97	58.686	ENSSMAG00000020933	rad54l2	95	58.156	Scophthalmus_maximus
ENSCVAG00000005376	-	98	76.366	ENSSMAG00000009978	-	98	76.057	Scophthalmus_maximus
ENSCVAG00000005376	-	97	60.086	ENSSDUG00000014268	rad54l2	95	59.272	Seriola_dumerili
ENSCVAG00000005376	-	100	78.275	ENSSDUG00000016711	-	100	79.078	Seriola_dumerili
ENSCVAG00000005376	-	97	60.663	ENSSLDG00000023959	rad54l2	97	62.107	Seriola_lalandi_dorsalis
ENSCVAG00000005376	-	99	75.915	ENSSLDG00000023388	-	100	76.237	Seriola_lalandi_dorsalis
ENSCVAG00000005376	-	93	77.111	ENSSPAG00000006371	-	100	79.190	Stegastes_partitus
ENSCVAG00000005376	-	99	58.300	ENSSPAG00000016532	rad54l2	96	59.542	Stegastes_partitus
ENSCVAG00000005376	-	98	57.687	ENSSSCG00000011425	RAD54L2	84	62.569	Sus_scrofa
ENSCVAG00000005376	-	97	59.690	ENSTGUG00000004888	RAD54L2	95	58.856	Taeniopygia_guttata
ENSCVAG00000005376	-	100	72.660	ENSTRUG00000011066	-	99	73.320	Takifugu_rubripes
ENSCVAG00000005376	-	97	58.380	ENSTRUG00000013962	rad54l2	93	58.836	Takifugu_rubripes
ENSCVAG00000005376	-	75	68.836	ENSTNIG00000014694	rad54l2	99	67.817	Tetraodon_nigroviridis
ENSCVAG00000005376	-	76	75.505	ENSTNIG00000006049	-	99	76.812	Tetraodon_nigroviridis
ENSCVAG00000005376	-	90	58.045	ENSTBEG00000003377	RAD54L2	89	61.538	Tupaia_belangeri
ENSCVAG00000005376	-	95	59.084	ENSUAMG00000020891	RAD54L2	90	61.107	Ursus_americanus
ENSCVAG00000005376	-	95	58.879	ENSUMAG00000021678	RAD54L2	82	67.261	Ursus_maritimus
ENSCVAG00000005376	-	95	58.939	ENSVVUG00000026874	RAD54L2	87	62.887	Vulpes_vulpes
ENSCVAG00000005376	-	98	57.709	ENSXETG00000000070	rad54l2	80	68.007	Xenopus_tropicalis
ENSCVAG00000005376	-	96	84.030	ENSXCOG00000002848	-	99	82.915	Xiphophorus_couchianus
ENSCVAG00000005376	-	97	57.112	ENSXCOG00000004961	rad54l2	89	59.788	Xiphophorus_couchianus
ENSCVAG00000005376	-	97	87.675	ENSXMAG00000019370	-	100	86.622	Xiphophorus_maculatus
ENSCVAG00000005376	-	97	59.275	ENSXMAG00000017182	rad54l2	97	61.414	Xiphophorus_maculatus