EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005395 (Gene tree)
Gene ID: 107098381
Gene Symbol: zgc:165603
Alias: -
Full Name: CUGBP Elav-like family member 5
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 23820 bases
Position: chrKL653273.1:278436-302255
Accession: 107098381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004120	RRM_1	PF00076.22	7.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008884	-	465	XM_015396032	ENSCVAP00000004120	154 (aa)	XP_015251518	UPI0007428B69

Gene Model

Click here to download ENSCVAG00000005395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005395	zgc:165603	94	68.276	ENSAOCG00000012598	zgc:165603	66	68.276	Amphiprion_ocellaris
ENSCVAG00000005395	zgc:165603	53	87.654	ENSAMXG00000036838	-	69	87.654	Astyanax_mexicanus
ENSCVAG00000005395	zgc:165603	61	81.818	ENSBTAG00000019131	CELF3	52	81.818	Bos_taurus
ENSCVAG00000005395	zgc:165603	97	78.571	ENSDARG00000098702	zgc:165603	99	82.468	Danio_rerio
ENSCVAG00000005395	zgc:165603	64	85.859	ENSLACG00000009899	zgc:165603	77	85.859	Latimeria_chalumnae
ENSCVAG00000005395	zgc:165603	61	83.117	ENSMUSG00000034818	Celf5	92	34.884	Mus_musculus
ENSCVAG00000005395	zgc:165603	61	83.117	MGP_SPRETEiJ_G0016461	Celf5	92	34.884	Mus_spretus
ENSCVAG00000005395	zgc:165603	98	67.550	ENSPKIG00000018966	zgc:165603	68	67.550	Paramormyrops_kingsleyae
ENSCVAG00000005395	zgc:165603	99	96.078	ENSPLAG00000009650	zgc:165603	83	96.078	Poecilia_latipinna
ENSCVAG00000005395	zgc:165603	96	73.649	ENSPMEG00000003804	zgc:165603	85	71.429	Poecilia_mexicana
ENSCVAG00000005395	zgc:165603	61	81.818	ENSSBOG00000021984	CELF3	51	81.818	Saimiri_boliviensis_boliviensis
ENSCVAG00000005395	zgc:165603	61	38.298	ENSXETG00000012296	celf3	66	38.298	Xenopus_tropicalis
ENSCVAG00000005395	zgc:165603	99	96.689	ENSXCOG00000009514	-	50	96.689	Xiphophorus_couchianus