EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005402 (Gene tree)
Gene ID: 107097224
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12078 bases
Position: chrKL653179.1:420741-432818
Accession: 107097224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022568	eIF-3c_N	PF05470.12	2.8e-251	1	1
ENSCVAP00000004065	eIF-3c_N	PF05470.12	8.7e-243	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008958	-	3344	XM_015394292	ENSCVAP00000022568	927 (aa)	XP_015249778	UPI000742B4C5
ENSCVAT00000008981	-	2547	-	ENSCVAP00000004065	848 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005402	eif3c	98	81.656	ENSG00000205609	EIF3CL	99	75.517	Homo_sapiens
ENSCVAG00000005402	eif3c	98	81.656	ENSG00000184110	EIF3C	100	84.810	Homo_sapiens
ENSCVAG00000005402	eif3c	100	91.613	ENSAPOG00000024092	eif3c	100	90.645	Acanthochromis_polyacanthus
ENSCVAG00000005402	eif3c	98	81.981	ENSAMEG00000015454	-	99	75.708	Ailuropoda_melanoleuca
ENSCVAG00000005402	eif3c	100	86.705	ENSACIG00000015082	eif3c	94	93.548	Amphilophus_citrinellus
ENSCVAG00000005402	eif3c	100	92.366	ENSAOCG00000021466	eif3c	100	91.398	Amphiprion_ocellaris
ENSCVAG00000005402	eif3c	100	92.366	ENSAPEG00000010521	eif3c	100	91.398	Amphiprion_percula
ENSCVAG00000005402	eif3c	100	91.837	ENSATEG00000019001	eif3c	100	90.430	Anabas_testudineus
ENSCVAG00000005402	eif3c	100	77.944	ENSACAG00000005937	-	100	77.195	Anolis_carolinensis
ENSCVAG00000005402	eif3c	98	81.656	ENSANAG00000020640	-	99	75.708	Aotus_nancymaae
ENSCVAG00000005402	eif3c	91	93.092	ENSACLG00000009322	eif3c	92	93.125	Astatotilapia_calliptera
ENSCVAG00000005402	eif3c	100	85.046	ENSACLG00000009347	eif3c	90	95.000	Astatotilapia_calliptera
ENSCVAG00000005402	eif3c	100	85.989	ENSAMXG00000020949	eif3c	100	85.561	Astyanax_mexicanus
ENSCVAG00000005402	eif3c	98	75.708	ENSBTAG00000006543	EIF3CL	99	75.490	Bos_taurus
ENSCVAG00000005402	eif3c	95	42.841	WBGene00001226	eif-3.C	84	47.176	Caenorhabditis_elegans
ENSCVAG00000005402	eif3c	98	76.144	ENSCJAG00000006341	-	98	78.297	Callithrix_jacchus
ENSCVAG00000005402	eif3c	98	81.981	ENSCAFG00000017143	-	99	75.708	Canis_familiaris
ENSCVAG00000005402	eif3c	98	81.981	ENSCAFG00020017587	-	99	75.708	Canis_lupus_dingo
ENSCVAG00000005402	eif3c	98	76.035	ENSCHIG00000024795	-	99	75.926	Capra_hircus
ENSCVAG00000005402	eif3c	98	81.818	ENSTSYG00000003486	-	99	75.381	Carlito_syrichta
ENSCVAG00000005402	eif3c	95	69.161	ENSCAPG00000015887	-	99	68.403	Cavia_aperea
ENSCVAG00000005402	eif3c	98	81.656	ENSCPOG00000007533	-	99	75.490	Cavia_porcellus
ENSCVAG00000005402	eif3c	98	81.656	ENSCCAG00000034928	-	99	74.755	Cebus_capucinus
ENSCVAG00000005402	eif3c	98	77.273	ENSCCAG00000027724	-	99	70.915	Cebus_capucinus
ENSCVAG00000005402	eif3c	97	64.829	ENSCCAG00000029099	-	98	63.687	Cebus_capucinus
ENSCVAG00000005402	eif3c	98	81.656	ENSCATG00000032673	-	100	74.732	Cercocebus_atys
ENSCVAG00000005402	eif3c	98	75.626	ENSCLAG00000011094	-	99	75.054	Chinchilla_lanigera
ENSCVAG00000005402	eif3c	98	81.656	ENSCSAG00000006297	-	100	74.732	Chlorocebus_sabaeus
ENSCVAG00000005402	eif3c	58	67.568	ENSCHOG00000003120	-	88	67.568	Choloepus_hoffmanni
ENSCVAG00000005402	eif3c	77	80.909	ENSCPBG00000012407	-	90	78.261	Chrysemys_picta_bellii
ENSCVAG00000005402	eif3c	91	52.051	ENSCSAVG00000006744	-	99	51.795	Ciona_savignyi
ENSCVAG00000005402	eif3c	98	81.656	ENSCANG00000033626	-	100	74.732	Colobus_angolensis_palliatus
ENSCVAG00000005402	eif3c	98	75.463	ENSCGRG00001015265	EIF3C	99	75.245	Cricetulus_griseus_chok1gshd
ENSCVAG00000005402	eif3c	100	89.763	ENSCSEG00000017770	eif3c	100	89.655	Cynoglossus_semilaevis
ENSCVAG00000005402	eif3c	100	87.353	ENSDARG00000016443	eif3c	100	86.495	Danio_rerio
ENSCVAG00000005402	eif3c	98	76.170	ENSDNOG00000031497	-	99	75.490	Dasypus_novemcinctus
ENSCVAG00000005402	eif3c	98	81.494	ENSDORG00000016471	Eif3c	99	75.163	Dipodomys_ordii
ENSCVAG00000005402	eif3c	90	58.221	FBgn0034258	eIF3c	84	57.516	Drosophila_melanogaster
ENSCVAG00000005402	eif3c	90	85.253	ENSETEG00000013527	-	91	85.253	Echinops_telfairi
ENSCVAG00000005402	eif3c	94	70.476	ENSEBUG00000001629	eif3c	90	70.635	Eptatretus_burgeri
ENSCVAG00000005402	eif3c	98	81.818	ENSECAG00000008746	-	99	75.599	Equus_caballus
ENSCVAG00000005402	eif3c	86	76.214	ENSEEUG00000006148	-	99	75.716	Erinaceus_europaeus
ENSCVAG00000005402	eif3c	66	55.914	ENSEEUG00000000726	-	64	54.514	Erinaceus_europaeus
ENSCVAG00000005402	eif3c	99	91.326	ENSELUG00000022257	eif3c	92	94.410	Esox_lucius
ENSCVAG00000005402	eif3c	98	81.818	ENSFCAG00000015782	-	99	75.599	Felis_catus
ENSCVAG00000005402	eif3c	98	81.818	ENSFDAG00000003588	-	99	75.599	Fukomys_damarensis
ENSCVAG00000005402	eif3c	100	96.129	ENSFHEG00000014154	EIF3C	100	96.129	Fundulus_heteroclitus
ENSCVAG00000005402	eif3c	96	87.767	ENSGMOG00000016885	eif3c	100	86.644	Gadus_morhua
ENSCVAG00000005402	eif3c	95	95.113	ENSGACG00000007652	eif3c	100	87.232	Gasterosteus_aculeatus
ENSCVAG00000005402	eif3c	93	74.332	ENSGAGG00000006666	-	100	74.564	Gopherus_agassizii
ENSCVAG00000005402	eif3c	94	81.494	ENSGGOG00000026919	EIF3C	99	76.331	Gorilla_gorilla
ENSCVAG00000005402	eif3c	59	65.354	ENSGGOG00000022677	-	90	77.992	Gorilla_gorilla
ENSCVAG00000005402	eif3c	98	81.818	ENSHGLG00000011445	EIF3C	99	75.490	Heterocephalus_glaber_female
ENSCVAG00000005402	eif3c	98	81.818	ENSHGLG00100000217	EIF3C	99	75.490	Heterocephalus_glaber_male
ENSCVAG00000005402	eif3c	100	88.254	ENSHCOG00000019694	eif3c	100	87.931	Hippocampus_comes
ENSCVAG00000005402	eif3c	92	93.333	ENSIPUG00000016878	eif3c	99	85.561	Ictalurus_punctatus
ENSCVAG00000005402	eif3c	98	81.656	ENSSTOG00000021278	-	99	75.599	Ictidomys_tridecemlineatus
ENSCVAG00000005402	eif3c	98	80.682	ENSJJAG00000012722	Eif3c	99	74.401	Jaculus_jaculus
ENSCVAG00000005402	eif3c	98	92.834	ENSKMAG00000021662	eif3c	100	91.711	Kryptolebias_marmoratus
ENSCVAG00000005402	eif3c	100	90.302	ENSLBEG00000023370	eif3c	100	89.763	Labrus_bergylta
ENSCVAG00000005402	eif3c	97	79.623	ENSLACG00000000770	eif3c	99	78.326	Latimeria_chalumnae
ENSCVAG00000005402	eif3c	98	81.818	ENSLAFG00000027426	-	99	75.217	Loxodonta_africana
ENSCVAG00000005402	eif3c	98	81.656	ENSMFAG00000041930	-	100	74.732	Macaca_fascicularis
ENSCVAG00000005402	eif3c	98	81.656	ENSMMUG00000011798	-	100	74.732	Macaca_mulatta
ENSCVAG00000005402	eif3c	98	81.656	ENSMNEG00000023915	-	100	74.732	Macaca_nemestrina
ENSCVAG00000005402	eif3c	98	81.656	ENSMLEG00000027529	-	100	74.732	Mandrillus_leucophaeus
ENSCVAG00000005402	eif3c	100	91.398	ENSMAMG00000012512	eif3c	100	90.430	Mastacembelus_armatus
ENSCVAG00000005402	eif3c	100	82.739	ENSMZEG00005013685	eif3c	92	93.125	Maylandia_zebra
ENSCVAG00000005402	eif3c	100	86.187	ENSMZEG00005013699	eif3c	89	95.000	Maylandia_zebra
ENSCVAG00000005402	eif3c	98	75.354	ENSMAUG00000010621	Eif3c	99	74.918	Mesocricetus_auratus
ENSCVAG00000005402	eif3c	98	81.981	ENSMICG00000036748	-	99	75.926	Microcebus_murinus
ENSCVAG00000005402	eif3c	92	81.331	ENSMOCG00000004204	Eif3c	99	73.501	Microtus_ochrogaster
ENSCVAG00000005402	eif3c	100	86.512	ENSMMOG00000001572	eif3c	100	87.442	Mola_mola
ENSCVAG00000005402	eif3c	100	75.027	ENSMODG00000015579	-	100	74.598	Monodelphis_domestica
ENSCVAG00000005402	eif3c	100	84.943	ENSMALG00000008907	eif3c	93	93.789	Monopterus_albus
ENSCVAG00000005402	eif3c	98	81.169	MGP_CAROLIEiJ_G0030451	Eif3c	99	74.700	Mus_caroli
ENSCVAG00000005402	eif3c	98	81.169	ENSMUSG00000030738	Eif3c	99	74.700	Mus_musculus
ENSCVAG00000005402	eif3c	98	74.918	MGP_PahariEiJ_G0013661	Eif3c	99	74.482	Mus_pahari
ENSCVAG00000005402	eif3c	98	81.169	MGP_SPRETEiJ_G0031565	Eif3c	99	74.700	Mus_spretus
ENSCVAG00000005402	eif3c	94	82.143	ENSMPUG00000012732	-	99	76.217	Mustela_putorius_furo
ENSCVAG00000005402	eif3c	98	75.791	ENSMLUG00000015558	-	99	75.326	Myotis_lucifugus
ENSCVAG00000005402	eif3c	79	62.264	ENSNGAG00000010901	-	76	63.175	Nannospalax_galili
ENSCVAG00000005402	eif3c	98	81.331	ENSNGAG00000007177	-	99	75.163	Nannospalax_galili
ENSCVAG00000005402	eif3c	90	78.652	ENSNLEG00000001425	-	94	70.833	Nomascus_leucogenys
ENSCVAG00000005402	eif3c	93	47.198	ENSMEUG00000005317	-	94	62.727	Notamacropus_eugenii
ENSCVAG00000005402	eif3c	100	62.661	ENSMEUG00000009939	-	99	62.876	Notamacropus_eugenii
ENSCVAG00000005402	eif3c	92	81.494	ENSOPRG00000000931	-	99	74.946	Ochotona_princeps
ENSCVAG00000005402	eif3c	98	75.926	ENSODEG00000013508	-	99	75.599	Octodon_degus
ENSCVAG00000005402	eif3c	72	71.289	ENSONIG00000011434	eif3c	100	71.014	Oreochromis_niloticus
ENSCVAG00000005402	eif3c	100	72.068	ENSOANG00000011410	-	100	72.068	Ornithorhynchus_anatinus
ENSCVAG00000005402	eif3c	98	81.981	ENSOCUG00000022489	-	99	75.599	Oryctolagus_cuniculus
ENSCVAG00000005402	eif3c	91	94.362	ENSORLG00000006318	eif3c	100	86.146	Oryzias_latipes
ENSCVAG00000005402	eif3c	91	94.362	ENSORLG00020015713	eif3c	95	94.481	Oryzias_latipes_hni
ENSCVAG00000005402	eif3c	91	94.362	ENSORLG00015013772	eif3c	100	87.901	Oryzias_latipes_hsok
ENSCVAG00000005402	eif3c	100	89.451	ENSOMEG00000020450	eif3c	100	89.247	Oryzias_melastigma
ENSCVAG00000005402	eif3c	98	81.494	ENSOGAG00000012737	-	99	75.272	Otolemur_garnettii
ENSCVAG00000005402	eif3c	98	76.035	ENSOARG00000002892	-	99	75.926	Ovis_aries
ENSCVAG00000005402	eif3c	98	81.818	ENSPPRG00000012336	-	99	75.599	Panthera_pardus
ENSCVAG00000005402	eif3c	98	81.818	ENSPTIG00000011712	-	99	75.599	Panthera_tigris_altaica
ENSCVAG00000005402	eif3c	98	81.656	ENSPANG00000021151	-	100	74.732	Papio_anubis
ENSCVAG00000005402	eif3c	100	86.081	ENSPKIG00000002049	eif3c	100	84.615	Paramormyrops_kingsleyae
ENSCVAG00000005402	eif3c	100	87.903	ENSPMGG00000005409	eif3c	94	94.797	Periophthalmus_magnuspinnatus
ENSCVAG00000005402	eif3c	97	81.331	ENSPEMG00000010899	Eif3c	99	74.837	Peromyscus_maniculatus_bairdii
ENSCVAG00000005402	eif3c	100	74.598	ENSPCIG00000025206	-	100	74.705	Phascolarctos_cinereus
ENSCVAG00000005402	eif3c	100	96.237	ENSPFOG00000004476	eif3c	100	96.237	Poecilia_formosa
ENSCVAG00000005402	eif3c	93	96.167	ENSPLAG00000017480	eif3c	100	96.167	Poecilia_latipinna
ENSCVAG00000005402	eif3c	100	96.017	ENSPMEG00000019512	eif3c	100	96.017	Poecilia_mexicana
ENSCVAG00000005402	eif3c	100	87.852	ENSPREG00000023139	eif3c	100	87.141	Poecilia_reticulata
ENSCVAG00000005402	eif3c	98	78.571	ENSPPYG00000007227	-	99	73.828	Pongo_abelii
ENSCVAG00000005402	eif3c	72	81.967	ENSPCAG00000012710	-	99	83.333	Procavia_capensis
ENSCVAG00000005402	eif3c	98	81.981	ENSPCOG00000019289	-	93	83.824	Propithecus_coquereli
ENSCVAG00000005402	eif3c	98	81.818	ENSPVAG00000005804	-	99	75.599	Pteropus_vampyrus
ENSCVAG00000005402	eif3c	56	88.750	ENSPNYG00000016530	eif3c	83	93.413	Pundamilia_nyererei
ENSCVAG00000005402	eif3c	100	87.876	ENSPNAG00000024040	eif3c	92	96.063	Pygocentrus_nattereri
ENSCVAG00000005402	eif3c	98	75.027	ENSRNOG00000018761	Eif3c	99	74.591	Rattus_norvegicus
ENSCVAG00000005402	eif3c	98	82.000	ENSRBIG00000044009	-	98	75.028	Rhinopithecus_bieti
ENSCVAG00000005402	eif3c	100	81.656	ENSRROG00000043626	-	100	74.732	Rhinopithecus_roxellana
ENSCVAG00000005402	eif3c	73	31.227	YMR309C	-	83	31.362	Saccharomyces_cerevisiae
ENSCVAG00000005402	eif3c	98	81.656	ENSSBOG00000032155	-	99	75.599	Saimiri_boliviensis_boliviensis
ENSCVAG00000005402	eif3c	97	75.277	ENSSHAG00000011808	-	99	75.333	Sarcophilus_harrisii
ENSCVAG00000005402	eif3c	100	85.285	ENSSFOG00015021823	eif3c	100	84.516	Scleropages_formosus
ENSCVAG00000005402	eif3c	97	95.222	ENSSMAG00000016638	eif3c	97	90.315	Scophthalmus_maximus
ENSCVAG00000005402	eif3c	100	91.819	ENSSDUG00000023117	eif3c	100	91.173	Seriola_dumerili
ENSCVAG00000005402	eif3c	100	91.604	ENSSLDG00000009706	eif3c	100	90.958	Seriola_lalandi_dorsalis
ENSCVAG00000005402	eif3c	95	81.153	ENSSPUG00000016470	-	100	75.884	Sphenodon_punctatus
ENSCVAG00000005402	eif3c	100	92.151	ENSSPAG00000000426	eif3c	100	91.183	Stegastes_partitus
ENSCVAG00000005402	eif3c	98	75.708	ENSSSCG00000034927	-	99	75.272	Sus_scrofa
ENSCVAG00000005402	eif3c	99	88.973	ENSTRUG00000008951	eif3c	99	88.973	Takifugu_rubripes
ENSCVAG00000005402	eif3c	100	87.232	ENSTNIG00000015210	eif3c	100	86.588	Tetraodon_nigroviridis
ENSCVAG00000005402	eif3c	98	81.656	ENSTTRG00000005880	-	99	75.599	Tursiops_truncatus
ENSCVAG00000005402	eif3c	72	81.981	ENSUAMG00000001127	-	91	92.357	Ursus_americanus
ENSCVAG00000005402	eif3c	98	81.981	ENSUMAG00000010927	-	99	75.708	Ursus_maritimus
ENSCVAG00000005402	eif3c	97	80.788	ENSVVUG00000025970	-	99	74.401	Vulpes_vulpes
ENSCVAG00000005402	eif3c	100	84.740	ENSXETG00000002941	eif3c	94	84.740	Xenopus_tropicalis
ENSCVAG00000005402	eif3c	100	94.855	ENSXMAG00000013796	eif3c	100	93.998	Xiphophorus_maculatus