EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005488 (Gene tree)
Gene ID: 107095162
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 18762 bases
Position: chrKL653026.1:89827-108588
Accession: 107095162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004195	La	PF05383.17	1.7e-17	1	1
ENSCVAP00000022667	La	PF05383.17	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008726	-	5449	XM_015391150	ENSCVAP00000022667	804 (aa)	XP_015246636	UPI000742ABC0
ENSCVAT00000008740	-	5407	XM_015391151	ENSCVAP00000004195	790 (aa)	XP_015246637	UPI00074277F8

Gene Model

Click here to download ENSCVAG00000005488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005488	larp4aa	74	40.000	ENSCVAG00000008910	LARP4B	82	37.883

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005488	larp4aa	89	56.314	ENSG00000161813	LARP4	98	62.169	Homo_sapiens
ENSCVAG00000005488	larp4aa	100	85.450	ENSAPOG00000007142	larp4aa	100	85.327	Acanthochromis_polyacanthus
ENSCVAG00000005488	larp4aa	95	51.588	ENSAPOG00000021331	larp4ab	100	51.461	Acanthochromis_polyacanthus
ENSCVAG00000005488	larp4aa	100	80.755	ENSACIG00000001198	larp4aa	100	81.887	Amphilophus_citrinellus
ENSCVAG00000005488	larp4aa	95	50.884	ENSAOCG00000006387	larp4ab	100	50.062	Amphiprion_ocellaris
ENSCVAG00000005488	larp4aa	100	87.192	ENSAOCG00000002408	larp4aa	100	87.192	Amphiprion_ocellaris
ENSCVAG00000005488	larp4aa	100	86.683	ENSAPEG00000019058	larp4aa	100	86.683	Amphiprion_percula
ENSCVAG00000005488	larp4aa	95	48.917	ENSATEG00000001018	larp4ab	100	48.528	Anabas_testudineus
ENSCVAG00000005488	larp4aa	100	83.835	ENSATEG00000020715	larp4aa	100	83.709	Anabas_testudineus
ENSCVAG00000005488	larp4aa	95	48.446	ENSAPLG00000013661	LARP4	99	49.677	Anas_platyrhynchos
ENSCVAG00000005488	larp4aa	95	48.917	ENSACAG00000017133	LARP4	96	48.912	Anolis_carolinensis
ENSCVAG00000005488	larp4aa	86	60.300	ENSANAG00000029342	LARP4	98	62.500	Aotus_nancymaae
ENSCVAG00000005488	larp4aa	100	81.227	ENSACLG00000002575	larp4aa	100	82.209	Astatotilapia_calliptera
ENSCVAG00000005488	larp4aa	100	63.919	ENSAMXG00000036493	larp4aa	100	64.200	Astyanax_mexicanus
ENSCVAG00000005488	larp4aa	100	50.909	ENSAMXG00000001515	larp4ab	100	53.277	Astyanax_mexicanus
ENSCVAG00000005488	larp4aa	82	62.264	ENSCJAG00000021131	LARP4	97	62.366	Callithrix_jacchus
ENSCVAG00000005488	larp4aa	82	61.725	ENSCAFG00020014554	LARP4	89	61.725	Canis_lupus_dingo
ENSCVAG00000005488	larp4aa	82	62.735	ENSTSYG00000004342	LARP4	98	62.334	Carlito_syrichta
ENSCVAG00000005488	larp4aa	94	38.089	ENSCAPG00000012942	LARP4	91	46.341	Cavia_aperea
ENSCVAG00000005488	larp4aa	95	45.232	ENSCPOG00000020519	LARP4	99	45.478	Cavia_porcellus
ENSCVAG00000005488	larp4aa	87	59.551	ENSCCAG00000024439	LARP4	98	61.968	Cebus_capucinus
ENSCVAG00000005488	larp4aa	95	47.497	ENSCATG00000044528	LARP4	99	47.240	Cercocebus_atys
ENSCVAG00000005488	larp4aa	95	47.887	ENSCLAG00000001829	LARP4	99	48.325	Chinchilla_lanigera
ENSCVAG00000005488	larp4aa	98	49.317	ENSCPBG00000019407	LARP4	92	49.250	Chrysemys_picta_bellii
ENSCVAG00000005488	larp4aa	89	56.655	ENSCANG00000029159	-	98	62.698	Colobus_angolensis_palliatus
ENSCVAG00000005488	larp4aa	83	56.364	ENSCANG00000033097	-	91	60.123	Colobus_angolensis_palliatus
ENSCVAG00000005488	larp4aa	95	48.715	ENSCGRG00001010818	Larp4	99	48.399	Cricetulus_griseus_chok1gshd
ENSCVAG00000005488	larp4aa	95	48.715	ENSCGRG00000009382	Larp4	100	48.399	Cricetulus_griseus_crigri
ENSCVAG00000005488	larp4aa	100	80.244	ENSCSEG00000001963	larp4aa	100	80.244	Cynoglossus_semilaevis
ENSCVAG00000005488	larp4aa	95	51.866	ENSDARG00000074979	larp4ab	78	85.507	Danio_rerio
ENSCVAG00000005488	larp4aa	100	63.450	ENSDARG00000078401	larp4aa	100	62.999	Danio_rerio
ENSCVAG00000005488	larp4aa	54	86.667	ENSETEG00000011683	LARP4	56	86.667	Echinops_telfairi
ENSCVAG00000005488	larp4aa	69	39.062	ENSEBUG00000010394	LARP4	85	38.783	Eptatretus_burgeri
ENSCVAG00000005488	larp4aa	65	58.051	ENSEASG00005004356	LARP4	82	62.112	Equus_asinus_asinus
ENSCVAG00000005488	larp4aa	52	84.615	ENSEEUG00000000316	LARP4	53	84.615	Erinaceus_europaeus
ENSCVAG00000005488	larp4aa	100	61.247	ENSELUG00000000395	larp4aa	86	76.307	Esox_lucius
ENSCVAG00000005488	larp4aa	65	81.858	ENSELUG00000018650	larp4ab	85	80.263	Esox_lucius
ENSCVAG00000005488	larp4aa	82	62.234	ENSFCAG00000031897	LARP4	98	61.942	Felis_catus
ENSCVAG00000005488	larp4aa	80	50.612	ENSFALG00000002114	LARP4	57	63.969	Ficedula_albicollis
ENSCVAG00000005488	larp4aa	95	48.182	ENSFDAG00000006406	-	99	49.481	Fukomys_damarensis
ENSCVAG00000005488	larp4aa	100	88.603	ENSFHEG00000004338	larp4aa	100	88.725	Fundulus_heteroclitus
ENSCVAG00000005488	larp4aa	95	47.187	ENSFHEG00000013854	larp4ab	99	46.607	Fundulus_heteroclitus
ENSCVAG00000005488	larp4aa	100	71.895	ENSGMOG00000008246	larp4aa	100	72.271	Gadus_morhua
ENSCVAG00000005488	larp4aa	91	48.361	ENSGALG00000042122	LARP4	92	49.796	Gallus_gallus
ENSCVAG00000005488	larp4aa	95	47.748	ENSGAFG00000021777	larp4ab	99	47.165	Gambusia_affinis
ENSCVAG00000005488	larp4aa	95	48.992	ENSGACG00000000680	larp4ab	99	51.105	Gasterosteus_aculeatus
ENSCVAG00000005488	larp4aa	100	78.250	ENSGACG00000008381	larp4aa	98	89.197	Gasterosteus_aculeatus
ENSCVAG00000005488	larp4aa	95	51.026	ENSGAGG00000006969	LARP4	99	50.320	Gopherus_agassizii
ENSCVAG00000005488	larp4aa	87	59.851	ENSGGOG00000015230	LARP4	99	59.851	Gorilla_gorilla
ENSCVAG00000005488	larp4aa	100	81.104	ENSHBUG00000023074	larp4aa	100	82.086	Haplochromis_burtoni
ENSCVAG00000005488	larp4aa	81	49.922	ENSHGLG00000013875	-	96	49.531	Heterocephalus_glaber_female
ENSCVAG00000005488	larp4aa	86	49.501	ENSHGLG00000005513	-	96	49.927	Heterocephalus_glaber_female
ENSCVAG00000005488	larp4aa	95	46.084	ENSHGLG00100011678	-	99	45.561	Heterocephalus_glaber_male
ENSCVAG00000005488	larp4aa	100	74.785	ENSHCOG00000015951	larp4aa	100	74.662	Hippocampus_comes
ENSCVAG00000005488	larp4aa	95	46.743	ENSHCOG00000020857	larp4ab	100	45.876	Hippocampus_comes
ENSCVAG00000005488	larp4aa	100	61.456	ENSIPUG00000007514	larp4aa	100	60.599	Ictalurus_punctatus
ENSCVAG00000005488	larp4aa	95	49.674	ENSIPUG00000021659	larp4ab	99	48.895	Ictalurus_punctatus
ENSCVAG00000005488	larp4aa	83	63.542	ENSSTOG00000003553	LARP4	89	63.542	Ictidomys_tridecemlineatus
ENSCVAG00000005488	larp4aa	100	85.025	ENSKMAG00000006800	larp4aa	100	84.406	Kryptolebias_marmoratus
ENSCVAG00000005488	larp4aa	95	48.852	ENSKMAG00000018556	larp4ab	100	48.855	Kryptolebias_marmoratus
ENSCVAG00000005488	larp4aa	97	83.147	ENSLBEG00000014537	larp4aa	100	81.570	Labrus_bergylta
ENSCVAG00000005488	larp4aa	95	50.386	ENSLBEG00000019306	larp4ab	100	50.256	Labrus_bergylta
ENSCVAG00000005488	larp4aa	99	49.700	ENSLACG00000019090	LARP4	99	48.622	Latimeria_chalumnae
ENSCVAG00000005488	larp4aa	100	59.318	ENSLOCG00000007113	larp4ab	100	59.805	Lepisosteus_oculatus
ENSCVAG00000005488	larp4aa	81	47.699	ENSLAFG00000005160	LARP4	52	62.304	Loxodonta_africana
ENSCVAG00000005488	larp4aa	82	63.003	ENSMFAG00000043681	LARP4	98	62.698	Macaca_fascicularis
ENSCVAG00000005488	larp4aa	82	63.003	ENSMMUG00000008172	LARP4	98	62.698	Macaca_mulatta
ENSCVAG00000005488	larp4aa	73	70.333	ENSMNEG00000034602	LARP4	98	48.860	Macaca_nemestrina
ENSCVAG00000005488	larp4aa	83	45.972	ENSMNEG00000037799	-	86	75.000	Macaca_nemestrina
ENSCVAG00000005488	larp4aa	89	56.655	ENSMLEG00000039661	LARP4	98	62.698	Mandrillus_leucophaeus
ENSCVAG00000005488	larp4aa	95	50.965	ENSMAMG00000002616	larp4ab	100	51.605	Mastacembelus_armatus
ENSCVAG00000005488	larp4aa	100	85.117	ENSMAMG00000011206	larp4aa	100	84.748	Mastacembelus_armatus
ENSCVAG00000005488	larp4aa	100	81.595	ENSMZEG00005001813	larp4aa	100	82.454	Maylandia_zebra
ENSCVAG00000005488	larp4aa	91	48.844	ENSMGAG00000010598	LARP4	92	49.324	Meleagris_gallopavo
ENSCVAG00000005488	larp4aa	81	63.842	ENSMICG00000030156	-	87	63.842	Microcebus_murinus
ENSCVAG00000005488	larp4aa	69	76.923	ENSMICG00000012388	-	95	77.011	Microcebus_murinus
ENSCVAG00000005488	larp4aa	95	46.013	ENSMMOG00000021861	larp4ab	92	57.593	Mola_mola
ENSCVAG00000005488	larp4aa	100	78.837	ENSMMOG00000004785	larp4aa	100	78.589	Mola_mola
ENSCVAG00000005488	larp4aa	72	63.043	MGP_CAROLIEiJ_G0020281	Larp4	84	62.928	Mus_caroli
ENSCVAG00000005488	larp4aa	100	81.718	ENSNBRG00000011292	larp4aa	100	81.595	Neolamprologus_brichardi
ENSCVAG00000005488	larp4aa	89	56.701	ENSNLEG00000017798	LARP4	98	62.500	Nomascus_leucogenys
ENSCVAG00000005488	larp4aa	95	47.539	ENSODEG00000009770	LARP4	100	46.871	Octodon_degus
ENSCVAG00000005488	larp4aa	95	46.918	ENSONIG00000019124	larp4ab	88	62.198	Oreochromis_niloticus
ENSCVAG00000005488	larp4aa	100	82.581	ENSONIG00000011895	larp4aa	100	83.459	Oreochromis_niloticus
ENSCVAG00000005488	larp4aa	95	47.619	ENSOCUG00000026872	-	99	47.006	Oryctolagus_cuniculus
ENSCVAG00000005488	larp4aa	95	47.165	ENSOCUG00000021417	-	99	46.369	Oryctolagus_cuniculus
ENSCVAG00000005488	larp4aa	100	77.901	ENSORLG00000006758	larp4aa	100	77.284	Oryzias_latipes
ENSCVAG00000005488	larp4aa	100	77.778	ENSORLG00020010258	larp4aa	100	77.531	Oryzias_latipes_hni
ENSCVAG00000005488	larp4aa	100	77.531	ENSORLG00015002292	larp4aa	100	77.284	Oryzias_latipes_hsok
ENSCVAG00000005488	larp4aa	100	75.871	ENSOMEG00000019749	larp4aa	96	85.795	Oryzias_melastigma
ENSCVAG00000005488	larp4aa	66	62.500	ENSPPAG00000035100	LARP4	85	62.169	Pan_paniscus
ENSCVAG00000005488	larp4aa	82	62.234	ENSPPRG00000004522	LARP4	98	61.942	Panthera_pardus
ENSCVAG00000005488	larp4aa	82	62.234	ENSPTIG00000015617	LARP4	98	61.942	Panthera_tigris_altaica
ENSCVAG00000005488	larp4aa	82	62.466	ENSPTRG00000004935	LARP4	98	62.169	Pan_troglodytes
ENSCVAG00000005488	larp4aa	89	56.655	ENSPANG00000022964	LARP4	98	62.698	Papio_anubis
ENSCVAG00000005488	larp4aa	100	58.802	ENSPKIG00000005950	larp4ab	100	58.413	Paramormyrops_kingsleyae
ENSCVAG00000005488	larp4aa	51	57.661	ENSPMAG00000002788	LARP4	78	57.708	Petromyzon_marinus
ENSCVAG00000005488	larp4aa	96	48.320	ENSPCIG00000000384	LARP4	99	48.177	Phascolarctos_cinereus
ENSCVAG00000005488	larp4aa	100	89.753	ENSPFOG00000013148	larp4aa	100	89.259	Poecilia_formosa
ENSCVAG00000005488	larp4aa	95	47.302	ENSPFOG00000009764	larp4ab	99	46.193	Poecilia_formosa
ENSCVAG00000005488	larp4aa	100	89.573	ENSPLAG00000013626	larp4aa	100	89.070	Poecilia_latipinna
ENSCVAG00000005488	larp4aa	95	47.541	ENSPLAG00000008502	larp4ab	99	46.447	Poecilia_latipinna
ENSCVAG00000005488	larp4aa	100	89.630	ENSPMEG00000014271	larp4aa	100	89.136	Poecilia_mexicana
ENSCVAG00000005488	larp4aa	95	47.661	ENSPMEG00000002720	larp4ab	99	47.155	Poecilia_mexicana
ENSCVAG00000005488	larp4aa	100	90.189	ENSPREG00000022597	larp4aa	100	89.811	Poecilia_reticulata
ENSCVAG00000005488	larp4aa	76	66.899	ENSPCAG00000003671	LARP4	81	66.899	Procavia_capensis
ENSCVAG00000005488	larp4aa	82	62.466	ENSPCOG00000026291	LARP4	98	62.169	Propithecus_coquereli
ENSCVAG00000005488	larp4aa	78	57.716	ENSPVAG00000016840	LARP4	90	42.598	Pteropus_vampyrus
ENSCVAG00000005488	larp4aa	100	81.227	ENSPNYG00000022265	larp4aa	100	82.209	Pundamilia_nyererei
ENSCVAG00000005488	larp4aa	96	53.392	ENSPNAG00000014478	larp4ab	99	54.937	Pygocentrus_nattereri
ENSCVAG00000005488	larp4aa	97	61.318	ENSPNAG00000024770	larp4aa	99	62.516	Pygocentrus_nattereri
ENSCVAG00000005488	larp4aa	68	55.870	ENSRBIG00000036890	-	99	55.870	Rhinopithecus_bieti
ENSCVAG00000005488	larp4aa	81	54.972	ENSRBIG00000038857	-	91	63.102	Rhinopithecus_bieti
ENSCVAG00000005488	larp4aa	82	63.003	ENSRROG00000042764	-	98	63.102	Rhinopithecus_roxellana
ENSCVAG00000005488	larp4aa	68	55.870	ENSRROG00000025487	-	99	55.870	Rhinopithecus_roxellana
ENSCVAG00000005488	larp4aa	82	61.725	ENSSBOG00000026650	LARP4	98	61.436	Saimiri_boliviensis_boliviensis
ENSCVAG00000005488	larp4aa	99	60.203	ENSSFOG00015003868	larp4aa	99	61.675	Scleropages_formosus
ENSCVAG00000005488	larp4aa	100	58.566	ENSSFOG00015014096	larp4ab	100	57.959	Scleropages_formosus
ENSCVAG00000005488	larp4aa	95	49.554	ENSSMAG00000002838	larp4ab	100	50.699	Scophthalmus_maximus
ENSCVAG00000005488	larp4aa	100	83.292	ENSSMAG00000019473	larp4aa	100	83.784	Scophthalmus_maximus
ENSCVAG00000005488	larp4aa	95	52.091	ENSSDUG00000006655	larp4ab	100	52.405	Seriola_dumerili
ENSCVAG00000005488	larp4aa	100	86.084	ENSSDUG00000010621	larp4aa	100	86.084	Seriola_dumerili
ENSCVAG00000005488	larp4aa	100	85.591	ENSSLDG00000004942	larp4aa	100	85.591	Seriola_lalandi_dorsalis
ENSCVAG00000005488	larp4aa	95	51.269	ENSSLDG00000001791	larp4ab	100	51.711	Seriola_lalandi_dorsalis
ENSCVAG00000005488	larp4aa	82	54.545	ENSSARG00000012469	LARP4	87	54.917	Sorex_araneus
ENSCVAG00000005488	larp4aa	91	47.568	ENSSPUG00000016552	LARP4	93	48.188	Sphenodon_punctatus
ENSCVAG00000005488	larp4aa	89	90.226	ENSSPAG00000007222	larp4aa	95	90.226	Stegastes_partitus
ENSCVAG00000005488	larp4aa	95	51.392	ENSSPAG00000002172	larp4ab	100	51.790	Stegastes_partitus
ENSCVAG00000005488	larp4aa	95	47.484	ENSTGUG00000003479	LARP4	99	48.271	Taeniopygia_guttata
ENSCVAG00000005488	larp4aa	95	45.765	ENSTRUG00000007206	larp4ab	100	44.656	Takifugu_rubripes
ENSCVAG00000005488	larp4aa	95	74.738	ENSTNIG00000015109	larp4aa	99	73.491	Tetraodon_nigroviridis
ENSCVAG00000005488	larp4aa	95	45.031	ENSTNIG00000014571	larp4ab	100	44.780	Tetraodon_nigroviridis
ENSCVAG00000005488	larp4aa	79	52.786	ENSTBEG00000005167	LARP4	84	53.079	Tupaia_belangeri
ENSCVAG00000005488	larp4aa	95	47.097	ENSTTRG00000003764	LARP4	90	61.097	Tursiops_truncatus
ENSCVAG00000005488	larp4aa	71	58.246	ENSVVUG00000024717	LARP4	85	58.188	Vulpes_vulpes
ENSCVAG00000005488	larp4aa	91	48.493	ENSXETG00000007283	larp4	99	49.120	Xenopus_tropicalis
ENSCVAG00000005488	larp4aa	100	83.951	ENSXCOG00000006387	larp4aa	100	83.580	Xiphophorus_couchianus
ENSCVAG00000005488	larp4aa	95	47.328	ENSXMAG00000002156	larp4ab	99	46.947	Xiphophorus_maculatus
ENSCVAG00000005488	larp4aa	100	89.383	ENSXMAG00000010519	larp4aa	100	89.012	Xiphophorus_maculatus