EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005498 (Gene tree)
Gene ID: 107103205
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14814 bases
Position: chrKL653894.1:1516-16329
Accession: 107103205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004169	PWI	PF01480.17	1.1e-14	1	1
ENSCVAP00000022645	PWI	PF01480.17	2.3e-14	1	1
ENSCVAP00000022683	PWI	PF01480.17	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008774	-	2922	XM_015402769	ENSCVAP00000022645	605 (aa)	XP_015258255	-
ENSCVAT00000008799	-	1098	-	ENSCVAP00000004169	365 (aa)	-	-
ENSCVAT00000008764	-	3118	-	ENSCVAP00000022683	615 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005498	rbm25a	99	68.421	ENSCVAG00000003478	rbm25b	71	65.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005498	rbm25a	99	70.051	ENSAPOG00000015321	rbm25b	71	69.903	Acanthochromis_polyacanthus
ENSCVAG00000005498	rbm25a	99	88.043	ENSAPOG00000017757	rbm25a	74	70.732	Acanthochromis_polyacanthus
ENSCVAG00000005498	rbm25a	99	83.673	ENSACIG00000019482	rbm25a	70	75.314	Amphilophus_citrinellus
ENSCVAG00000005498	rbm25a	93	71.159	ENSACIG00000014178	rbm25b	69	66.071	Amphilophus_citrinellus
ENSCVAG00000005498	rbm25a	99	89.256	ENSAOCG00000013695	rbm25a	55	78.763	Amphiprion_ocellaris
ENSCVAG00000005498	rbm25a	99	68.878	ENSAOCG00000019308	rbm25b	67	83.262	Amphiprion_ocellaris
ENSCVAG00000005498	rbm25a	99	89.256	ENSAPEG00000007514	rbm25a	70	90.805	Amphiprion_percula
ENSCVAG00000005498	rbm25a	99	73.770	ENSAPEG00000009666	rbm25b	67	83.262	Amphiprion_percula
ENSCVAG00000005498	rbm25a	99	76.648	ENSATEG00000017312	rbm25b	73	78.277	Anabas_testudineus
ENSCVAG00000005498	rbm25a	99	82.952	ENSATEG00000020676	rbm25a	63	82.609	Anabas_testudineus
ENSCVAG00000005498	rbm25a	99	74.112	ENSACLG00000024359	rbm25b	58	69.691	Astatotilapia_calliptera
ENSCVAG00000005498	rbm25a	99	87.052	ENSACLG00000027482	rbm25a	74	69.231	Astatotilapia_calliptera
ENSCVAG00000005498	rbm25a	99	72.938	ENSAMXG00000024525	rbm25b	57	67.692	Astyanax_mexicanus
ENSCVAG00000005498	rbm25a	99	33.159	WBGene00012245	W04D2.6	75	46.341	Caenorhabditis_elegans
ENSCVAG00000005498	rbm25a	99	72.131	ENSCJAG00000046744	-	97	87.234	Callithrix_jacchus
ENSCVAG00000005498	rbm25a	99	75.275	ENSCHIG00000021190	-	96	88.043	Capra_hircus
ENSCVAG00000005498	rbm25a	99	74.932	ENSCSEG00000020737	rbm25b	69	80.162	Cynoglossus_semilaevis
ENSCVAG00000005498	rbm25a	99	78.626	ENSCSEG00000009430	rbm25a	71	74.878	Cynoglossus_semilaevis
ENSCVAG00000005498	rbm25a	99	68.956	ENSDARG00000039266	rbm25a	99	94.937	Danio_rerio
ENSCVAG00000005498	rbm25a	67	76.423	ENSDARG00000006395	rbm25b	70	69.537	Danio_rerio
ENSCVAG00000005498	rbm25a	71	66.667	ENSEBUG00000002963	rbm25b	59	56.688	Eptatretus_burgeri
ENSCVAG00000005498	rbm25a	89	72.393	ENSEASG00005004743	-	93	72.787	Equus_asinus_asinus
ENSCVAG00000005498	rbm25a	89	72.393	ENSECAG00000013395	RBM25	93	72.787	Equus_caballus
ENSCVAG00000005498	rbm25a	93	76.331	ENSELUG00000021847	rbm25a	52	75.096	Esox_lucius
ENSCVAG00000005498	rbm25a	95	78.571	ENSELUG00000007730	rbm25b	60	68.242	Esox_lucius
ENSCVAG00000005498	rbm25a	99	70.927	ENSFHEG00000003513	rbm25b	59	69.423	Fundulus_heteroclitus
ENSCVAG00000005498	rbm25a	99	92.636	ENSFHEG00000005318	rbm25a	72	89.015	Fundulus_heteroclitus
ENSCVAG00000005498	rbm25a	99	77.838	ENSGMOG00000014070	rbm25a	54	96.154	Gadus_morhua
ENSCVAG00000005498	rbm25a	99	76.374	ENSGALG00000009332	-	96	88.043	Gallus_gallus
ENSCVAG00000005498	rbm25a	99	72.818	ENSGAFG00000001092	rbm25b	69	58.926	Gambusia_affinis
ENSCVAG00000005498	rbm25a	99	93.023	ENSGAFG00000018036	rbm25a	69	93.625	Gambusia_affinis
ENSCVAG00000005498	rbm25a	99	87.052	ENSHBUG00000016908	rbm25a	70	79.579	Haplochromis_burtoni
ENSCVAG00000005498	rbm25a	99	72.658	ENSHBUG00000018499	rbm25b	58	69.884	Haplochromis_burtoni
ENSCVAG00000005498	rbm25a	99	75.414	ENSHGLG00100018236	-	51	77.866	Heterocephalus_glaber_male
ENSCVAG00000005498	rbm25a	99	74.932	ENSHCOG00000000142	rbm25b	69	77.481	Hippocampus_comes
ENSCVAG00000005498	rbm25a	95	90.110	ENSHCOG00000018433	rbm25a	98	67.814	Hippocampus_comes
ENSCVAG00000005498	rbm25a	99	88.235	ENSKMAG00000016242	rbm25a	72	79.937	Kryptolebias_marmoratus
ENSCVAG00000005498	rbm25a	99	77.322	ENSKMAG00000018826	rbm25b	69	80.000	Kryptolebias_marmoratus
ENSCVAG00000005498	rbm25a	99	77.198	ENSLBEG00000010667	rbm25b	70	78.626	Labrus_bergylta
ENSCVAG00000005498	rbm25a	99	77.534	ENSLACG00000011845	RBM25	68	77.011	Latimeria_chalumnae
ENSCVAG00000005498	rbm25a	99	73.243	ENSLOCG00000014196	rbm25b	69	73.208	Lepisosteus_oculatus
ENSCVAG00000005498	rbm25a	99	75.138	ENSMMUG00000002332	RBM25	95	88.043	Macaca_mulatta
ENSCVAG00000005498	rbm25a	98	72.423	ENSMAMG00000004524	rbm25b	69	79.771	Mastacembelus_armatus
ENSCVAG00000005498	rbm25a	99	87.052	ENSMZEG00005011183	rbm25a	70	79.579	Maylandia_zebra
ENSCVAG00000005498	rbm25a	99	74.112	ENSMZEG00005001453	rbm25b	58	69.691	Maylandia_zebra
ENSCVAG00000005498	rbm25a	99	76.243	ENSMGAG00000011707	RBM25	67	77.432	Meleagris_gallopavo
ENSCVAG00000005498	rbm25a	95	73.775	ENSMAUG00000017751	-	88	88.043	Mesocricetus_auratus
ENSCVAG00000005498	rbm25a	99	72.081	ENSMMOG00000015545	rbm25b	70	63.339	Mola_mola
ENSCVAG00000005498	rbm25a	99	89.373	ENSMMOG00000009065	rbm25a	70	91.051	Mola_mola
ENSCVAG00000005498	rbm25a	100	84.478	ENSMALG00000020459	rbm25a	90	84.478	Monopterus_albus
ENSCVAG00000005498	rbm25a	99	71.465	ENSMALG00000020441	rbm25b	90	68.665	Monopterus_albus
ENSCVAG00000005498	rbm25a	99	75.138	MGP_SPRETEiJ_G0018766	-	68	86.260	Mus_spretus
ENSCVAG00000005498	rbm25a	99	75.138	ENSMPUG00000003698	RBM25	50	86.260	Mustela_putorius_furo
ENSCVAG00000005498	rbm25a	99	70.166	ENSMLUG00000024167	-	67	71.937	Myotis_lucifugus
ENSCVAG00000005498	rbm25a	99	83.120	ENSNBRG00000003761	rbm25a	70	79.741	Neolamprologus_brichardi
ENSCVAG00000005498	rbm25a	93	68.022	ENSNBRG00000022192	rbm25b	57	61.702	Neolamprologus_brichardi
ENSCVAG00000005498	rbm25a	99	75.833	ENSOCUG00000013737	RBM25	50	83.133	Oryctolagus_cuniculus
ENSCVAG00000005498	rbm25a	99	85.989	ENSORLG00000009958	rbm25a	99	85.989	Oryzias_latipes
ENSCVAG00000005498	rbm25a	99	71.756	ENSORLG00000011874	rbm25b	71	61.682	Oryzias_latipes
ENSCVAG00000005498	rbm25a	99	77.198	ENSORLG00020016422	rbm25b	71	62.617	Oryzias_latipes_hni
ENSCVAG00000005498	rbm25a	99	72.265	ENSORLG00015011269	rbm25b	71	62.305	Oryzias_latipes_hsok
ENSCVAG00000005498	rbm25a	99	72.658	ENSOMEG00000023172	rbm25b	71	68.790	Oryzias_melastigma
ENSCVAG00000005498	rbm25a	100	81.549	ENSOMEG00000022138	rbm25a	71	81.342	Oryzias_melastigma
ENSCVAG00000005498	rbm25a	99	75.128	ENSPKIG00000003203	rbm25b	57	70.600	Paramormyrops_kingsleyae
ENSCVAG00000005498	rbm25a	99	73.130	ENSPMGG00000001791	rbm25a	97	77.291	Periophthalmus_magnuspinnatus
ENSCVAG00000005498	rbm25a	99	72.796	ENSPMGG00000015740	rbm25b	72	69.293	Periophthalmus_magnuspinnatus
ENSCVAG00000005498	rbm25a	89	72.393	ENSPEMG00000008001	-	93	72.787	Peromyscus_maniculatus_bairdii
ENSCVAG00000005498	rbm25a	99	93.411	ENSPFOG00000017931	rbm25a	71	85.737	Poecilia_formosa
ENSCVAG00000005498	rbm25a	99	73.000	ENSPFOG00000018808	rbm25b	72	66.297	Poecilia_formosa
ENSCVAG00000005498	rbm25a	89	77.538	ENSPLAG00000000100	rbm25b	93	78.618	Poecilia_latipinna
ENSCVAG00000005498	rbm25a	99	93.411	ENSPLAG00000018338	rbm25a	71	87.154	Poecilia_latipinna
ENSCVAG00000005498	rbm25a	99	73.250	ENSPMEG00000019161	rbm25b	68	72.180	Poecilia_mexicana
ENSCVAG00000005498	rbm25a	99	93.411	ENSPMEG00000024470	rbm25a	69	95.181	Poecilia_mexicana
ENSCVAG00000005498	rbm25a	99	73.250	ENSPMEG00000012262	rbm25b	99	74.250	Poecilia_mexicana
ENSCVAG00000005498	rbm25a	99	73.383	ENSPREG00000008522	rbm25b	67	73.004	Poecilia_reticulata
ENSCVAG00000005498	rbm25a	99	94.186	ENSPREG00000009228	rbm25a	71	87.928	Poecilia_reticulata
ENSCVAG00000005498	rbm25a	99	87.052	ENSPNYG00000022596	rbm25a	71	73.947	Pundamilia_nyererei
ENSCVAG00000005498	rbm25a	93	68.022	ENSPNYG00000023303	rbm25b	57	61.702	Pundamilia_nyererei
ENSCVAG00000005498	rbm25a	99	72.093	ENSPNAG00000012024	rbm25b	70	69.920	Pygocentrus_nattereri
ENSCVAG00000005498	rbm25a	99	75.275	ENSRROG00000035556	RBM25	93	88.043	Rhinopithecus_roxellana
ENSCVAG00000005498	rbm25a	66	78.099	ENSSBOG00000034153	RBM25	63	76.654	Saimiri_boliviensis_boliviensis
ENSCVAG00000005498	rbm25a	99	74.235	ENSSFOG00015007093	rbm25	58	70.793	Scleropages_formosus
ENSCVAG00000005498	rbm25a	99	67.839	ENSSMAG00000002520	rbm25b	58	67.505	Scophthalmus_maximus
ENSCVAG00000005498	rbm25a	99	82.278	ENSSMAG00000009745	rbm25a	71	74.765	Scophthalmus_maximus
ENSCVAG00000005498	rbm25a	99	83.715	ENSSDUG00000017984	rbm25a	59	80.739	Seriola_dumerili
ENSCVAG00000005498	rbm25a	99	72.081	ENSSLDG00000024573	rbm25b	93	70.526	Seriola_lalandi_dorsalis
ENSCVAG00000005498	rbm25a	99	83.715	ENSSLDG00000010342	rbm25a	58	80.739	Seriola_lalandi_dorsalis
ENSCVAG00000005498	rbm25a	99	75.549	ENSSPUG00000000999	-	99	76.648	Sphenodon_punctatus
ENSCVAG00000005498	rbm25a	99	77.198	ENSSPAG00000016168	rbm25b	69	79.924	Stegastes_partitus
ENSCVAG00000005498	rbm25a	99	80.542	ENSSPAG00000011114	rbm25a	58	81.128	Stegastes_partitus
ENSCVAG00000005498	rbm25a	99	77.198	ENSTRUG00000017964	rbm25b	70	80.153	Takifugu_rubripes
ENSCVAG00000005498	rbm25a	99	77.975	ENSTRUG00000003076	rbm25a	76	72.998	Takifugu_rubripes
ENSCVAG00000005498	rbm25a	99	81.572	ENSTNIG00000004673	rbm25a	99	81.572	Tetraodon_nigroviridis
ENSCVAG00000005498	rbm25a	99	75.067	ENSTNIG00000012222	rbm25b	69	68.750	Tetraodon_nigroviridis
ENSCVAG00000005498	rbm25a	90	72.810	ENSUAMG00000007707	RBM25	93	72.787	Ursus_americanus
ENSCVAG00000005498	rbm25a	99	75.138	ENSVPAG00000009052	RBM25	57	76.654	Vicugna_pacos
ENSCVAG00000005498	rbm25a	99	74.795	ENSXETG00000021857	rbm25	51	87.200	Xenopus_tropicalis
ENSCVAG00000005498	rbm25a	99	89.459	ENSXCOG00000004043	RBM25	70	89.434	Xiphophorus_couchianus
ENSCVAG00000005498	rbm25a	99	71.507	ENSXCOG00000002222	rbm25b	69	72.243	Xiphophorus_couchianus
ENSCVAG00000005498	rbm25a	99	93.023	ENSXMAG00000009077	RBM25	71	86.623	Xiphophorus_maculatus
ENSCVAG00000005498	rbm25a	99	72.358	ENSXMAG00000017290	rbm25b	70	73.134	Xiphophorus_maculatus