EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2481 bases
Position: chrKL652874.1:331900-334380
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004241	PRP38	PF03371.15	6.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008674	-	627	-	ENSCVAP00000004241	208 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005543	-	79	95.152	ENSACIG00000016459	-	96	95.152	Amphilophus_citrinellus
ENSCVAG00000005543	-	70	55.172	WBGene00022434	Y108G3AL.2	50	51.235	Caenorhabditis_elegans
ENSCVAG00000005543	-	70	74.483	ENSCSAVG00000009443	-	53	74.825	Ciona_savignyi
ENSCVAG00000005543	-	75	71.154	FBgn0030468	CG1622	93	70.229	Drosophila_melanogaster
ENSCVAG00000005543	-	79	95.152	ENSNBRG00000019221	-	98	95.152	Neolamprologus_brichardi
ENSCVAG00000005543	-	83	98.266	ENSORLG00000015621	-	100	98.266	Oryzias_latipes
ENSCVAG00000005543	-	83	98.266	ENSORLG00020016276	-	99	98.266	Oryzias_latipes_hni
ENSCVAG00000005543	-	99	93.659	ENSORLG00015016270	-	99	93.659	Oryzias_latipes_hsok
ENSCVAG00000005543	-	88	97.283	ENSOMEG00000022050	-	100	97.283	Oryzias_melastigma
ENSCVAG00000005543	-	77	89.441	ENSPMGG00000017585	-	99	89.441	Periophthalmus_magnuspinnatus
ENSCVAG00000005543	-	68	78.912	ENSPMAG00000007150	-	88	82.609	Petromyzon_marinus
ENSCVAG00000005543	-	89	98.387	ENSPFOG00000004025	-	98	98.387	Poecilia_formosa
ENSCVAG00000005543	-	88	98.361	ENSPREG00000015599	-	99	98.361	Poecilia_reticulata
ENSCVAG00000005543	-	87	87.912	ENSSFOG00015011251	-	95	87.912	Scleropages_formosus
ENSCVAG00000005543	-	81	83.333	ENSSFOG00015004405	-	99	77.717	Scleropages_formosus
ENSCVAG00000005543	-	88	93.443	ENSSMAG00000001781	-	99	93.443	Scophthalmus_maximus
ENSCVAG00000005543	-	88	95.082	ENSSDUG00000016574	-	99	95.082	Seriola_dumerili
ENSCVAG00000005543	-	88	95.082	ENSSLDG00000023487	-	99	95.082	Seriola_lalandi_dorsalis