EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2015 bases
Position: chrKL653689.1:21235-23249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004270	SM-ATX	PF14438.6	2.2e-09	1	1
ENSCVAP00000004270	LSM14	PF12701.7	6.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008617	-	294	-	ENSCVAP00000004270	97 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005570	-	99	63.542	ENSCVAG00000012411	-	99	63.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005570	-	98	57.895	ENSAPOG00000009997	-	88	57.895	Acanthochromis_polyacanthus
ENSCVAG00000005570	-	99	62.500	ENSACIG00000003134	-	78	62.500	Amphilophus_citrinellus
ENSCVAG00000005570	-	99	60.417	ENSAPEG00000013779	-	95	60.417	Amphiprion_percula
ENSCVAG00000005570	-	85	69.512	ENSATEG00000015882	-	93	69.512	Anabas_testudineus
ENSCVAG00000005570	-	99	62.500	ENSGAFG00000013718	-	99	62.500	Gambusia_affinis
ENSCVAG00000005570	-	98	90.526	ENSHBUG00000011864	-	71	90.526	Haplochromis_burtoni
ENSCVAG00000005570	-	94	64.835	ENSHBUG00000012323	-	87	64.835	Haplochromis_burtoni
ENSCVAG00000005570	-	98	89.474	ENSHCOG00000004862	-	87	89.474	Hippocampus_comes
ENSCVAG00000005570	-	99	63.542	ENSKMAG00000012850	-	99	63.542	Kryptolebias_marmoratus
ENSCVAG00000005570	-	93	61.111	ENSKMAG00000016674	-	85	61.053	Kryptolebias_marmoratus
ENSCVAG00000005570	-	98	91.579	ENSLBEG00000016427	lsm14b	66	91.579	Labrus_bergylta
ENSCVAG00000005570	-	99	66.667	ENSLBEG00000007971	-	92	66.667	Labrus_bergylta
ENSCVAG00000005570	-	98	76.842	ENSNGAG00000016305	-	76	76.842	Nannospalax_galili
ENSCVAG00000005570	-	98	90.526	ENSNBRG00000022606	-	71	90.526	Neolamprologus_brichardi
ENSCVAG00000005570	-	94	65.934	ENSNBRG00000022370	-	87	65.934	Neolamprologus_brichardi
ENSCVAG00000005570	-	99	61.856	ENSORLG00020018184	-	99	61.856	Oryzias_latipes_hni
ENSCVAG00000005570	-	82	65.000	ENSOMEG00000007241	-	96	65.000	Oryzias_melastigma
ENSCVAG00000005570	-	99	78.125	ENSPKIG00000003275	lsm14b	89	78.125	Paramormyrops_kingsleyae
ENSCVAG00000005570	-	84	56.790	ENSPMGG00000004595	-	82	56.790	Periophthalmus_magnuspinnatus
ENSCVAG00000005570	-	98	88.421	ENSPMGG00000014569	lsm14b	59	88.421	Periophthalmus_magnuspinnatus
ENSCVAG00000005570	-	86	65.060	ENSPREG00000007817	-	95	65.060	Poecilia_reticulata
ENSCVAG00000005570	-	100	90.722	ENSPREG00000016484	-	63	90.722	Poecilia_reticulata
ENSCVAG00000005570	-	94	64.835	ENSPNYG00000021706	-	86	64.835	Pundamilia_nyererei
ENSCVAG00000005570	-	98	90.526	ENSPNYG00000019601	-	71	90.526	Pundamilia_nyererei
ENSCVAG00000005570	-	88	68.235	ENSSLDG00000012686	-	92	68.235	Seriola_lalandi_dorsalis
ENSCVAG00000005570	-	89	90.909	ENSSLDG00000011706	-	96	90.909	Seriola_lalandi_dorsalis
ENSCVAG00000005570	-	88	68.235	ENSSLDG00000011341	-	92	68.235	Seriola_lalandi_dorsalis
ENSCVAG00000005570	-	98	60.000	ENSSPAG00000018837	-	94	60.000	Stegastes_partitus
ENSCVAG00000005570	-	98	91.579	ENSXCOG00000017365	-	96	91.579	Xiphophorus_couchianus
ENSCVAG00000005570	-	89	60.465	ENSXCOG00000011423	-	95	60.465	Xiphophorus_couchianus
ENSCVAG00000005570	-	89	60.465	ENSXMAG00000015481	-	95	60.465	Xiphophorus_maculatus