EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005590 (Gene tree)
Gene ID: 107093579
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10215 bases
Position: chrKL652519.1:356377-366591
Accession: 107093579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022731	MTS	PF05175.14	3.6e-05	1	1
ENSCVAP00000022731	Met_10	PF02475.16	8.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008565	-	3527	XM_015388731	ENSCVAP00000022731	400 (aa)	XP_015244217	UPI000742BAC0

Gene Model

Click here to download ENSCVAG00000005590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005590	trmt12	98	51.069	ENSG00000183665	TRMT12	93	51.190	Homo_sapiens
ENSCVAG00000005590	trmt12	100	72.070	ENSAPOG00000011979	trmt12	100	72.070	Acanthochromis_polyacanthus
ENSCVAG00000005590	trmt12	97	50.962	ENSAMEG00000019612	TRMT12	92	50.962	Ailuropoda_melanoleuca
ENSCVAG00000005590	trmt12	95	73.228	ENSACIG00000012982	trmt12	99	73.228	Amphilophus_citrinellus
ENSCVAG00000005590	trmt12	100	73.566	ENSAOCG00000020570	trmt12	100	73.566	Amphiprion_ocellaris
ENSCVAG00000005590	trmt12	100	74.065	ENSAPEG00000006335	trmt12	100	74.065	Amphiprion_percula
ENSCVAG00000005590	trmt12	100	71.358	ENSATEG00000018316	trmt12	100	71.358	Anabas_testudineus
ENSCVAG00000005590	trmt12	100	71.820	ENSACLG00000001008	trmt12	100	71.820	Astatotilapia_calliptera
ENSCVAG00000005590	trmt12	99	55.476	ENSAMXG00000040366	trmt12	99	55.476	Astyanax_mexicanus
ENSCVAG00000005590	trmt12	98	49.642	ENSBTAG00000020398	TRMT12	90	49.640	Bos_taurus
ENSCVAG00000005590	trmt12	54	40.553	WBGene00009586	F40F9.10	50	39.076	Caenorhabditis_elegans
ENSCVAG00000005590	trmt12	97	50.000	ENSCJAG00000022174	TRMT12	93	50.000	Callithrix_jacchus
ENSCVAG00000005590	trmt12	98	50.594	ENSCAFG00000001040	TRMT12	95	50.594	Canis_familiaris
ENSCVAG00000005590	trmt12	98	50.594	ENSCAFG00020006500	TRMT12	95	50.594	Canis_lupus_dingo
ENSCVAG00000005590	trmt12	97	50.360	ENSCHIG00000016574	TRMT12	95	50.360	Capra_hircus
ENSCVAG00000005590	trmt12	97	51.442	ENSCPOG00000026520	TRMT12	94	51.442	Cavia_porcellus
ENSCVAG00000005590	trmt12	98	51.306	ENSCSAG00000018615	TRMT12	93	51.306	Chlorocebus_sabaeus
ENSCVAG00000005590	trmt12	97	52.000	ENSCPBG00000014290	TRMT12	93	52.000	Chrysemys_picta_bellii
ENSCVAG00000005590	trmt12	71	48.973	ENSCING00000019633	-	97	48.973	Ciona_intestinalis
ENSCVAG00000005590	trmt12	72	49.310	ENSCSAVG00000000415	-	91	49.310	Ciona_savignyi
ENSCVAG00000005590	trmt12	98	50.000	ENSCGRG00001014834	Trmt12	95	50.123	Cricetulus_griseus_chok1gshd
ENSCVAG00000005590	trmt12	99	63.480	ENSCSEG00000002675	trmt12	95	63.480	Cynoglossus_semilaevis
ENSCVAG00000005590	trmt12	99	58.333	ENSDARG00000060338	trmt12	99	58.865	Danio_rerio
ENSCVAG00000005590	trmt12	99	46.226	ENSETEG00000009373	TRMT12	95	46.714	Echinops_telfairi
ENSCVAG00000005590	trmt12	98	51.074	ENSEASG00005022441	TRMT12	95	51.074	Equus_asinus_asinus
ENSCVAG00000005590	trmt12	99	47.877	ENSEEUG00000004844	TRMT12	95	47.877	Erinaceus_europaeus
ENSCVAG00000005590	trmt12	99	63.145	ENSELUG00000004240	trmt12	99	64.611	Esox_lucius
ENSCVAG00000005590	trmt12	65	56.537	ENSFALG00000003825	TRMT12	93	63.725	Ficedula_albicollis
ENSCVAG00000005590	trmt12	98	50.238	ENSFDAG00000016647	TRMT12	95	50.238	Fukomys_damarensis
ENSCVAG00000005590	trmt12	93	69.867	ENSFHEG00000017338	trmt12	96	69.867	Fundulus_heteroclitus
ENSCVAG00000005590	trmt12	79	56.805	ENSGALG00000006773	TRMT12	74	56.973	Gallus_gallus
ENSCVAG00000005590	trmt12	100	78.358	ENSGAFG00000020056	trmt12	100	78.358	Gambusia_affinis
ENSCVAG00000005590	trmt12	96	67.969	ENSGACG00000017351	trmt12	100	67.969	Gasterosteus_aculeatus
ENSCVAG00000005590	trmt12	97	53.555	ENSGAGG00000006032	TRMT12	95	53.555	Gopherus_agassizii
ENSCVAG00000005590	trmt12	100	72.070	ENSHBUG00000016412	trmt12	100	72.070	Haplochromis_burtoni
ENSCVAG00000005590	trmt12	99	49.412	ENSHGLG00000020498	TRMT12	95	49.881	Heterocephalus_glaber_female
ENSCVAG00000005590	trmt12	99	49.412	ENSHGLG00100020132	TRMT12	95	50.000	Heterocephalus_glaber_male
ENSCVAG00000005590	trmt12	100	66.667	ENSHCOG00000005050	trmt12	100	66.667	Hippocampus_comes
ENSCVAG00000005590	trmt12	99	56.068	ENSIPUG00000018011	trmt12	92	56.068	Ictalurus_punctatus
ENSCVAG00000005590	trmt12	97	49.760	ENSSTOG00000030617	TRMT12	94	49.760	Ictidomys_tridecemlineatus
ENSCVAG00000005590	trmt12	99	74.813	ENSKMAG00000000891	trmt12	99	74.813	Kryptolebias_marmoratus
ENSCVAG00000005590	trmt12	53	76.147	ENSLBEG00000017456	-	89	76.147	Labrus_bergylta
ENSCVAG00000005590	trmt12	100	65.679	ENSLBEG00000028712	trmt12	100	65.432	Labrus_bergylta
ENSCVAG00000005590	trmt12	97	50.835	ENSLACG00000015869	TRMT12	94	51.074	Latimeria_chalumnae
ENSCVAG00000005590	trmt12	99	54.902	ENSLOCG00000015290	trmt12	99	55.257	Lepisosteus_oculatus
ENSCVAG00000005590	trmt12	97	49.522	ENSLAFG00000012519	TRMT12	95	49.522	Loxodonta_africana
ENSCVAG00000005590	trmt12	98	51.069	ENSMMUG00000015490	TRMT12	94	51.069	Macaca_mulatta
ENSCVAG00000005590	trmt12	99	69.307	ENSMAMG00000020311	trmt12	99	69.307	Mastacembelus_armatus
ENSCVAG00000005590	trmt12	100	71.322	ENSMZEG00005007349	trmt12	100	71.322	Maylandia_zebra
ENSCVAG00000005590	trmt12	99	50.594	ENSMGAG00000004174	TRMT12	95	50.594	Meleagris_gallopavo
ENSCVAG00000005590	trmt12	99	67.574	ENSMMOG00000000412	trmt12	99	67.574	Mola_mola
ENSCVAG00000005590	trmt12	99	48.916	ENSMODG00000011798	-	87	48.916	Monodelphis_domestica
ENSCVAG00000005590	trmt12	98	51.106	ENSMODG00000021403	-	93	51.358	Monodelphis_domestica
ENSCVAG00000005590	trmt12	100	70.617	ENSMALG00000008668	trmt12	100	70.617	Monopterus_albus
ENSCVAG00000005590	trmt12	98	49.522	MGP_CAROLIEiJ_G0019820	Trmt12	94	49.522	Mus_caroli
ENSCVAG00000005590	trmt12	98	50.000	ENSMUSG00000037085	Trmt12	93	50.120	Mus_musculus
ENSCVAG00000005590	trmt12	98	50.957	MGP_PahariEiJ_G0019829	Trmt12	93	51.079	Mus_pahari
ENSCVAG00000005590	trmt12	98	49.522	MGP_SPRETEiJ_G0020717	Trmt12	93	49.640	Mus_spretus
ENSCVAG00000005590	trmt12	98	49.524	ENSMPUG00000019150	TRMT12	94	49.524	Mustela_putorius_furo
ENSCVAG00000005590	trmt12	98	49.043	ENSMLUG00000003753	TRMT12	95	49.161	Myotis_lucifugus
ENSCVAG00000005590	trmt12	98	48.449	ENSNGAG00000014548	Trmt12	95	48.565	Nannospalax_galili
ENSCVAG00000005590	trmt12	100	70.823	ENSNBRG00000021510	trmt12	100	70.823	Neolamprologus_brichardi
ENSCVAG00000005590	trmt12	99	46.934	ENSOPRG00000008067	TRMT12	95	46.934	Ochotona_princeps
ENSCVAG00000005590	trmt12	98	50.000	ENSODEG00000018933	TRMT12	95	50.239	Octodon_degus
ENSCVAG00000005590	trmt12	100	73.067	ENSONIG00000002614	trmt12	100	73.067	Oreochromis_niloticus
ENSCVAG00000005590	trmt12	97	47.304	ENSOANG00000009987	TRMT12	95	47.304	Ornithorhynchus_anatinus
ENSCVAG00000005590	trmt12	99	47.073	ENSOCUG00000026379	TRMT12	95	47.073	Oryctolagus_cuniculus
ENSCVAG00000005590	trmt12	100	68.500	ENSORLG00000001280	trmt12	100	70.250	Oryzias_latipes
ENSCVAG00000005590	trmt12	100	68.500	ENSORLG00020000708	trmt12	100	70.250	Oryzias_latipes_hni
ENSCVAG00000005590	trmt12	100	70.250	ENSORLG00015012344	trmt12	100	70.250	Oryzias_latipes_hsok
ENSCVAG00000005590	trmt12	100	68.500	ENSOMEG00000015267	trmt12	98	68.500	Oryzias_melastigma
ENSCVAG00000005590	trmt12	97	50.718	ENSOGAG00000015845	TRMT12	95	50.718	Otolemur_garnettii
ENSCVAG00000005590	trmt12	99	58.477	ENSPKIG00000004640	trmt12	98	59.591	Paramormyrops_kingsleyae
ENSCVAG00000005590	trmt12	58	58.364	ENSPSIG00000003476	TRMT12	99	58.364	Pelodiscus_sinensis
ENSCVAG00000005590	trmt12	99	64.198	ENSPMGG00000016356	trmt12	97	64.198	Periophthalmus_magnuspinnatus
ENSCVAG00000005590	trmt12	98	52.206	ENSPCIG00000002967	TRMT12	86	52.206	Phascolarctos_cinereus
ENSCVAG00000005590	trmt12	99	76.119	ENSPFOG00000016931	trmt12	99	76.119	Poecilia_formosa
ENSCVAG00000005590	trmt12	100	77.805	ENSPLAG00000020621	trmt12	100	77.805	Poecilia_latipinna
ENSCVAG00000005590	trmt12	100	79.302	ENSPMEG00000000818	trmt12	100	79.302	Poecilia_mexicana
ENSCVAG00000005590	trmt12	100	77.805	ENSPREG00000011621	trmt12	100	77.805	Poecilia_reticulata
ENSCVAG00000005590	trmt12	98	50.831	ENSPPYG00000018866	TRMT12	93	51.429	Pongo_abelii
ENSCVAG00000005590	trmt12	97	48.804	ENSPCAG00000000556	TRMT12	93	48.804	Procavia_capensis
ENSCVAG00000005590	trmt12	98	50.476	ENSPVAG00000009149	TRMT12	94	50.597	Pteropus_vampyrus
ENSCVAG00000005590	trmt12	95	71.391	ENSPNYG00000010696	trmt12	99	71.391	Pundamilia_nyererei
ENSCVAG00000005590	trmt12	99	54.654	ENSPNAG00000019028	trmt12	99	54.654	Pygocentrus_nattereri
ENSCVAG00000005590	trmt12	97	50.839	ENSRNOG00000008978	Trmt12	95	50.839	Rattus_norvegicus
ENSCVAG00000005590	trmt12	99	50.847	ENSSHAG00000003345	TRMT12	93	51.724	Sarcophilus_harrisii
ENSCVAG00000005590	trmt12	99	53.717	ENSSFOG00015006090	trmt12	99	53.717	Scleropages_formosus
ENSCVAG00000005590	trmt12	99	71.287	ENSSMAG00000013247	trmt12	99	71.287	Scophthalmus_maximus
ENSCVAG00000005590	trmt12	100	73.333	ENSSDUG00000006168	trmt12	100	73.333	Seriola_dumerili
ENSCVAG00000005590	trmt12	100	73.333	ENSSLDG00000025007	trmt12	100	73.333	Seriola_lalandi_dorsalis
ENSCVAG00000005590	trmt12	97	51.537	ENSSPUG00000005321	TRMT12	93	51.537	Sphenodon_punctatus
ENSCVAG00000005590	trmt12	100	73.317	ENSSPAG00000009435	trmt12	97	73.317	Stegastes_partitus
ENSCVAG00000005590	trmt12	99	49.279	ENSTGUG00000002280	TRMT12	99	49.519	Taeniopygia_guttata
ENSCVAG00000005590	trmt12	99	66.501	ENSTRUG00000011548	trmt12	99	66.501	Takifugu_rubripes
ENSCVAG00000005590	trmt12	99	65.848	ENSTNIG00000016866	trmt12	99	65.356	Tetraodon_nigroviridis
ENSCVAG00000005590	trmt12	98	50.358	ENSUAMG00000002067	TRMT12	96	50.358	Ursus_americanus
ENSCVAG00000005590	trmt12	97	51.196	ENSVPAG00000006519	TRMT12	94	51.196	Vicugna_pacos
ENSCVAG00000005590	trmt12	99	49.765	ENSVVUG00000016790	TRMT12	95	49.765	Vulpes_vulpes
ENSCVAG00000005590	trmt12	99	49.500	ENSXETG00000009641	trmt12	95	49.000	Xenopus_tropicalis
ENSCVAG00000005590	trmt12	100	77.916	ENSXCOG00000016505	trmt12	100	77.916	Xiphophorus_couchianus
ENSCVAG00000005590	trmt12	100	78.109	ENSXMAG00000025318	trmt12	100	78.109	Xiphophorus_maculatus