EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005640 (Gene tree)
Gene ID: 107086521
Gene Symbol: -
Alias: -
Full Name: zinc finger CCHC-type containing 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 22876 bases
Position: chrKL652655.1:1094262-1117137
Accession: 107086521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004344	zf-CCHC	PF00098.23	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008485	-	6200	XM_015377509	ENSCVAP00000004344	1054 (aa)	XP_015232995	UPI000742B834

Gene Model

Click here to download ENSCVAG00000005640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005640	-	95	35.222	ENSG00000141664	ZCCHC2	86	48.256	Homo_sapiens
ENSCVAG00000005640	-	96	34.996	ENSAMEG00000006283	ZCCHC2	71	37.464	Ailuropoda_melanoleuca
ENSCVAG00000005640	-	74	59.838	ENSAOCG00000018816	-	99	59.954	Amphiprion_ocellaris
ENSCVAG00000005640	-	100	62.392	ENSAPEG00000012103	-	100	62.619	Amphiprion_percula
ENSCVAG00000005640	-	100	57.908	ENSATEG00000020193	zcchc2	99	58.199	Anabas_testudineus
ENSCVAG00000005640	-	81	33.502	ENSAPLG00000003573	ZCCHC2	74	36.683	Anas_platyrhynchos
ENSCVAG00000005640	-	95	33.160	ENSACAG00000011813	ZCCHC2	78	36.923	Anolis_carolinensis
ENSCVAG00000005640	-	96	35.492	ENSANAG00000035764	ZCCHC2	71	37.555	Aotus_nancymaae
ENSCVAG00000005640	-	100	57.432	ENSACLG00000004507	-	100	56.726	Astatotilapia_calliptera
ENSCVAG00000005640	-	93	35.549	ENSAMXG00000041767	zcchc2	60	39.840	Astyanax_mexicanus
ENSCVAG00000005640	-	50	35.738	ENSAMXG00000040972	-	92	32.226	Astyanax_mexicanus
ENSCVAG00000005640	-	75	37.481	ENSBTAG00000050848	ZCCHC2	57	37.957	Bos_taurus
ENSCVAG00000005640	-	95	35.428	ENSCJAG00000003312	ZCCHC2	69	37.500	Callithrix_jacchus
ENSCVAG00000005640	-	79	32.918	ENSCAFG00000000073	ZCCHC2	68	36.066	Canis_familiaris
ENSCVAG00000005640	-	94	34.428	ENSCAFG00020017046	ZCCHC2	68	36.762	Canis_lupus_dingo
ENSCVAG00000005640	-	75	39.051	ENSCHIG00000016298	ZCCHC2	57	39.422	Capra_hircus
ENSCVAG00000005640	-	72	33.296	ENSTSYG00000007331	ZCCHC2	65	37.438	Carlito_syrichta
ENSCVAG00000005640	-	72	32.304	ENSCPOG00000014085	ZCCHC2	58	36.683	Cavia_porcellus
ENSCVAG00000005640	-	95	35.304	ENSCCAG00000021979	ZCCHC2	76	36.683	Cebus_capucinus
ENSCVAG00000005640	-	95	35.166	ENSCATG00000038478	ZCCHC2	73	37.463	Cercocebus_atys
ENSCVAG00000005640	-	72	32.664	ENSCLAG00000010985	ZCCHC2	64	37.186	Chinchilla_lanigera
ENSCVAG00000005640	-	93	35.111	ENSCSAG00000018187	ZCCHC2	73	37.612	Chlorocebus_sabaeus
ENSCVAG00000005640	-	72	31.991	ENSCHOG00000002359	ZCCHC2	61	37.056	Choloepus_hoffmanni
ENSCVAG00000005640	-	100	34.984	ENSCPBG00000026588	ZCCHC2	77	36.318	Chrysemys_picta_bellii
ENSCVAG00000005640	-	72	33.259	ENSCANG00000029790	ZCCHC2	65	36.683	Colobus_angolensis_palliatus
ENSCVAG00000005640	-	95	35.289	ENSCGRG00001022059	Zcchc2	58	36.657	Cricetulus_griseus_chok1gshd
ENSCVAG00000005640	-	100	55.370	ENSCSEG00000007152	-	96	55.729	Cynoglossus_semilaevis
ENSCVAG00000005640	-	91	33.333	ENSDARG00000067950	zcchc2	97	38.750	Danio_rerio
ENSCVAG00000005640	-	95	34.138	ENSDNOG00000015952	ZCCHC2	74	37.056	Dasypus_novemcinctus
ENSCVAG00000005640	-	86	38.110	ENSDORG00000010199	Zcchc2	77	36.683	Dipodomys_ordii
ENSCVAG00000005640	-	72	32.958	ENSETEG00000002750	ZCCHC2	62	36.816	Echinops_telfairi
ENSCVAG00000005640	-	95	34.805	ENSEASG00005002645	ZCCHC2	59	38.035	Equus_asinus_asinus
ENSCVAG00000005640	-	95	34.539	ENSECAG00000014990	ZCCHC2	55	38.182	Equus_caballus
ENSCVAG00000005640	-	53	38.035	ENSEEUG00000008744	ZCCHC2	65	37.469	Erinaceus_europaeus
ENSCVAG00000005640	-	95	34.896	ENSFCAG00000030054	ZCCHC2	69	37.705	Felis_catus
ENSCVAG00000005640	-	89	68.750	ENSFALG00000012977	ZCCHC2	70	68.750	Ficedula_albicollis
ENSCVAG00000005640	-	95	35.187	ENSGALG00000012889	ZCCHC2	71	36.686	Gallus_gallus
ENSCVAG00000005640	-	95	34.970	ENSGGOG00000002966	ZCCHC2	74	37.825	Gorilla_gorilla
ENSCVAG00000005640	-	100	57.255	ENSHBUG00000012799	-	100	56.376	Haplochromis_burtoni
ENSCVAG00000005640	-	95	30.995	ENSHGLG00000000903	-	70	35.000	Heterocephalus_glaber_female
ENSCVAG00000005640	-	95	34.585	ENSHGLG00000002443	-	69	37.730	Heterocephalus_glaber_female
ENSCVAG00000005640	-	95	32.509	ENSHGLG00100004917	-	58	35.861	Heterocephalus_glaber_male
ENSCVAG00000005640	-	74	42.000	ENSIPUG00000009963	zcchc2	81	41.091	Ictalurus_punctatus
ENSCVAG00000005640	-	80	32.553	ENSSTOG00000015357	ZCCHC2	69	36.683	Ictidomys_tridecemlineatus
ENSCVAG00000005640	-	93	35.561	ENSJJAG00000014570	Zcchc2	56	36.709	Jaculus_jaculus
ENSCVAG00000005640	-	98	44.268	ENSLOCG00000010044	zcchc2	98	43.513	Lepisosteus_oculatus
ENSCVAG00000005640	-	95	34.002	ENSLAFG00000021566	ZCCHC2	56	36.447	Loxodonta_africana
ENSCVAG00000005640	-	87	32.928	ENSMFAG00000033238	ZCCHC2	72	36.683	Macaca_fascicularis
ENSCVAG00000005640	-	91	33.904	ENSMMUG00000004434	ZCCHC2	65	36.683	Macaca_mulatta
ENSCVAG00000005640	-	95	35.166	ENSMNEG00000033594	ZCCHC2	74	37.463	Macaca_nemestrina
ENSCVAG00000005640	-	72	33.557	ENSMLEG00000031802	ZCCHC2	65	36.683	Mandrillus_leucophaeus
ENSCVAG00000005640	-	100	54.405	ENSMAMG00000021679	-	100	53.767	Mastacembelus_armatus
ENSCVAG00000005640	-	100	57.168	ENSMZEG00005015504	-	100	56.460	Maylandia_zebra
ENSCVAG00000005640	-	93	34.732	ENSMGAG00000004834	ZCCHC2	76	36.683	Meleagris_gallopavo
ENSCVAG00000005640	-	95	34.843	ENSMAUG00000016369	Zcchc2	63	36.415	Mesocricetus_auratus
ENSCVAG00000005640	-	95	34.026	ENSMICG00000001550	ZCCHC2	58	36.609	Microcebus_murinus
ENSCVAG00000005640	-	95	35.382	ENSMOCG00000021627	Zcchc2	62	37.569	Microtus_ochrogaster
ENSCVAG00000005640	-	95	37.459	ENSMODG00000005101	ZCCHC2	67	38.073	Monodelphis_domestica
ENSCVAG00000005640	-	95	36.133	MGP_CAROLIEiJ_G0014486	Zcchc2	59	37.518	Mus_caroli
ENSCVAG00000005640	-	95	35.882	ENSMUSG00000038866	Zcchc2	67	35.338	Mus_musculus
ENSCVAG00000005640	-	95	35.862	MGP_PahariEiJ_G0027720	Zcchc2	59	37.465	Mus_pahari
ENSCVAG00000005640	-	95	35.895	MGP_SPRETEiJ_G0015290	Zcchc2	59	37.749	Mus_spretus
ENSCVAG00000005640	-	93	31.942	ENSMPUG00000016510	ZCCHC2	58	33.025	Mustela_putorius_furo
ENSCVAG00000005640	-	72	33.707	ENSMLUG00000009495	ZCCHC2	63	38.071	Myotis_lucifugus
ENSCVAG00000005640	-	96	34.412	ENSNGAG00000022381	Zcchc2	58	36.443	Nannospalax_galili
ENSCVAG00000005640	-	71	32.457	ENSOPRG00000008527	ZCCHC2	71	35.533	Ochotona_princeps
ENSCVAG00000005640	-	95	34.138	ENSODEG00000005310	ZCCHC2	68	37.255	Octodon_degus
ENSCVAG00000005640	-	99	52.901	ENSONIG00000011258	-	100	52.618	Oreochromis_niloticus
ENSCVAG00000005640	-	71	33.562	ENSOCUG00000012130	ZCCHC2	52	35.217	Oryctolagus_cuniculus
ENSCVAG00000005640	-	74	60.072	ENSORLG00000004152	zcchc2	99	60.072	Oryzias_latipes
ENSCVAG00000005640	-	100	57.256	ENSORLG00020009577	-	100	57.696	Oryzias_latipes_hni
ENSCVAG00000005640	-	100	56.602	ENSORLG00015006011	-	100	57.130	Oryzias_latipes_hsok
ENSCVAG00000005640	-	100	58.886	ENSOMEG00000001146	-	100	59.593	Oryzias_melastigma
ENSCVAG00000005640	-	72	32.481	ENSOGAG00000024641	ZCCHC2	64	36.181	Otolemur_garnettii
ENSCVAG00000005640	-	95	35.330	ENSPPAG00000029037	ZCCHC2	74	37.500	Pan_paniscus
ENSCVAG00000005640	-	95	35.095	ENSPPRG00000000176	ZCCHC2	72	37.798	Panthera_pardus
ENSCVAG00000005640	-	95	35.222	ENSPTRG00000010076	ZCCHC2	69	37.293	Pan_troglodytes
ENSCVAG00000005640	-	95	35.166	ENSPANG00000013121	ZCCHC2	72	35.795	Papio_anubis
ENSCVAG00000005640	-	100	42.857	ENSPKIG00000001849	-	100	42.301	Paramormyrops_kingsleyae
ENSCVAG00000005640	-	100	44.541	ENSPKIG00000001677	zcchc2	100	43.190	Paramormyrops_kingsleyae
ENSCVAG00000005640	-	58	30.894	ENSPSIG00000007840	ZCCHC2	62	36.098	Pelodiscus_sinensis
ENSCVAG00000005640	-	57	35.294	ENSPCIG00000009877	ZCCHC14	51	35.198	Phascolarctos_cinereus
ENSCVAG00000005640	-	95	34.310	ENSPCIG00000011461	ZCCHC2	62	39.414	Phascolarctos_cinereus
ENSCVAG00000005640	-	99	63.802	ENSPFOG00000011854	-	99	67.083	Poecilia_formosa
ENSCVAG00000005640	-	100	72.529	ENSPLAG00000003953	-	100	72.620	Poecilia_latipinna
ENSCVAG00000005640	-	100	72.529	ENSPMEG00000002279	-	100	72.257	Poecilia_mexicana
ENSCVAG00000005640	-	100	72.257	ENSPREG00000011715	zcchc2	100	71.609	Poecilia_reticulata
ENSCVAG00000005640	-	95	35.105	ENSPCOG00000022710	ZCCHC2	56	37.538	Propithecus_coquereli
ENSCVAG00000005640	-	76	55.081	ENSPNYG00000021201	-	100	54.133	Pundamilia_nyererei
ENSCVAG00000005640	-	100	38.018	ENSPNAG00000012445	zcchc2	60	43.423	Pygocentrus_nattereri
ENSCVAG00000005640	-	99	42.021	ENSPNAG00000027536	-	99	39.525	Pygocentrus_nattereri
ENSCVAG00000005640	-	95	35.789	ENSRNOG00000002882	Zcchc2	73	37.811	Rattus_norvegicus
ENSCVAG00000005640	-	95	35.145	ENSRBIG00000035806	ZCCHC2	73	37.444	Rhinopithecus_bieti
ENSCVAG00000005640	-	95	35.145	ENSRROG00000034247	ZCCHC2	74	37.444	Rhinopithecus_roxellana
ENSCVAG00000005640	-	91	34.237	ENSSBOG00000022911	ZCCHC2	73	36.683	Saimiri_boliviensis_boliviensis
ENSCVAG00000005640	-	91	32.223	ENSSHAG00000016133	ZCCHC2	73	36.181	Sarcophilus_harrisii
ENSCVAG00000005640	-	55	32.376	ENSSFOG00015012993	-	96	32.053	Scleropages_formosus
ENSCVAG00000005640	-	76	40.115	ENSSFOG00015010533	-	99	38.209	Scleropages_formosus
ENSCVAG00000005640	-	99	59.310	ENSSMAG00000004119	-	100	60.742	Scophthalmus_maximus
ENSCVAG00000005640	-	83	60.081	ENSSDUG00000002388	-	93	60.486	Seriola_dumerili
ENSCVAG00000005640	-	100	61.762	ENSSLDG00000006969	zcchc2	100	62.361	Seriola_lalandi_dorsalis
ENSCVAG00000005640	-	100	62.976	ENSSPAG00000011032	-	100	63.951	Stegastes_partitus
ENSCVAG00000005640	-	95	34.323	ENSSSCG00000004897	ZCCHC2	68	37.750	Sus_scrofa
ENSCVAG00000005640	-	72	30.508	ENSTTRG00000013533	ZCCHC2	66	36.224	Tursiops_truncatus
ENSCVAG00000005640	-	95	35.217	ENSUAMG00000019763	ZCCHC2	71	37.818	Ursus_americanus
ENSCVAG00000005640	-	81	32.575	ENSUMAG00000003109	ZCCHC2	66	36.181	Ursus_maritimus
ENSCVAG00000005640	-	94	34.896	ENSVVUG00000017624	ZCCHC2	75	37.764	Vulpes_vulpes
ENSCVAG00000005640	-	98	31.915	ENSXETG00000032980	zcchc2	58	38.495	Xenopus_tropicalis