EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005684 (Gene tree)
Gene ID: 107088897
Gene Symbol: polr1c (1 of many)
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4899 bases
Position: chrKL652732.1:708333-713231
Accession: 107088897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004376	RNA_pol_A_bac	PF01000.26	2.8e-19	1	1
ENSCVAP00000004376	RNA_pol_L	PF01193.24	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008437	-	753	XM_015381366	ENSCVAP00000004376	250 (aa)	XP_015236852	-

Gene Model

Click here to download ENSCVAG00000005684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005684	polr1c	88	68.950	ENSG00000171453	POLR1C	73	69.811	Homo_sapiens
ENSCVAG00000005684	polr1c	85	88.208	ENSAPOG00000024356	polr1c	60	88.208	Acanthochromis_polyacanthus
ENSCVAG00000005684	polr1c	88	69.406	ENSAMEG00000012205	POLR1C	61	70.283	Ailuropoda_melanoleuca
ENSCVAG00000005684	polr1c	85	91.509	ENSACIG00000016268	polr1c	65	91.509	Amphilophus_citrinellus
ENSCVAG00000005684	polr1c	85	88.208	ENSAOCG00000011687	polr1c	59	88.208	Amphiprion_ocellaris
ENSCVAG00000005684	polr1c	85	89.151	ENSAPEG00000002433	polr1c	60	89.151	Amphiprion_percula
ENSCVAG00000005684	polr1c	84	92.381	ENSATEG00000005985	polr1c	60	92.381	Anabas_testudineus
ENSCVAG00000005684	polr1c	88	70.776	ENSAPLG00000002908	POLR1C	71	71.698	Anas_platyrhynchos
ENSCVAG00000005684	polr1c	88	69.406	ENSANAG00000025805	POLR1C	61	70.283	Aotus_nancymaae
ENSCVAG00000005684	polr1c	85	91.509	ENSACLG00000006573	polr1c	60	91.509	Astatotilapia_calliptera
ENSCVAG00000005684	polr1c	88	81.818	ENSAMXG00000012062	polr1c	61	83.491	Astyanax_mexicanus
ENSCVAG00000005684	polr1c	88	69.863	ENSBTAG00000018969	POLR1C	61	71.226	Bos_taurus
ENSCVAG00000005684	polr1c	86	48.611	WBGene00019275	rpac-40	56	50.244	Caenorhabditis_elegans
ENSCVAG00000005684	polr1c	88	68.493	ENSCJAG00000005594	POLR1C	61	69.340	Callithrix_jacchus
ENSCVAG00000005684	polr1c	88	69.406	ENSCAFG00000001872	POLR1C	61	70.755	Canis_familiaris
ENSCVAG00000005684	polr1c	88	69.406	ENSCAFG00020012018	POLR1C	61	70.755	Canis_lupus_dingo
ENSCVAG00000005684	polr1c	92	66.522	ENSCHIG00000004352	POLR1C	61	70.755	Capra_hircus
ENSCVAG00000005684	polr1c	88	69.406	ENSTSYG00000011921	POLR1C	61	70.283	Carlito_syrichta
ENSCVAG00000005684	polr1c	92	68.696	ENSCAPG00000015364	POLR1C	62	71.698	Cavia_aperea
ENSCVAG00000005684	polr1c	92	68.696	ENSCPOG00000038098	POLR1C	61	71.698	Cavia_porcellus
ENSCVAG00000005684	polr1c	88	68.950	ENSCCAG00000020169	POLR1C	61	69.811	Cebus_capucinus
ENSCVAG00000005684	polr1c	88	68.950	ENSCATG00000044045	POLR1C	61	70.283	Cercocebus_atys
ENSCVAG00000005684	polr1c	93	68.534	ENSCLAG00000009266	POLR1C	61	72.170	Chinchilla_lanigera
ENSCVAG00000005684	polr1c	88	67.580	ENSCSAG00000011913	POLR1C	61	69.340	Chlorocebus_sabaeus
ENSCVAG00000005684	polr1c	85	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSCVAG00000005684	polr1c	88	72.146	ENSCPBG00000025203	POLR1C	61	73.113	Chrysemys_picta_bellii
ENSCVAG00000005684	polr1c	82	54.369	ENSCING00000003563	-	59	54.369	Ciona_intestinalis
ENSCVAG00000005684	polr1c	88	68.950	ENSCANG00000043167	POLR1C	61	69.811	Colobus_angolensis_palliatus
ENSCVAG00000005684	polr1c	88	68.950	ENSCGRG00001017533	Polr1c	61	69.340	Cricetulus_griseus_chok1gshd
ENSCVAG00000005684	polr1c	88	68.950	ENSCGRG00000013225	Polr1c	71	69.340	Cricetulus_griseus_crigri
ENSCVAG00000005684	polr1c	90	83.929	ENSCSEG00000018097	polr1c	61	86.321	Cynoglossus_semilaevis
ENSCVAG00000005684	polr1c	88	80.455	ENSDARG00000039400	polr1c	59	82.547	Danio_rerio
ENSCVAG00000005684	polr1c	88	69.863	ENSDNOG00000042693	POLR1C	61	70.755	Dasypus_novemcinctus
ENSCVAG00000005684	polr1c	88	69.406	ENSDORG00000000429	Polr1c	61	70.283	Dipodomys_ordii
ENSCVAG00000005684	polr1c	96	46.215	FBgn0031657	CG3756	61	51.707	Drosophila_melanogaster
ENSCVAG00000005684	polr1c	87	65.138	ENSETEG00000010807	POLR1C	61	66.038	Echinops_telfairi
ENSCVAG00000005684	polr1c	90	64.159	ENSEBUG00000013725	polr1c	65	66.038	Eptatretus_burgeri
ENSCVAG00000005684	polr1c	88	69.863	ENSEASG00005003338	POLR1C	61	70.755	Equus_asinus_asinus
ENSCVAG00000005684	polr1c	92	66.667	ENSECAG00000023516	POLR1C	60	70.755	Equus_caballus
ENSCVAG00000005684	polr1c	88	70.776	ENSEEUG00000005471	POLR1C	61	71.698	Erinaceus_europaeus
ENSCVAG00000005684	polr1c	88	80.000	ENSELUG00000013027	polr1c	61	81.604	Esox_lucius
ENSCVAG00000005684	polr1c	88	69.406	ENSFCAG00000009735	POLR1C	61	70.283	Felis_catus
ENSCVAG00000005684	polr1c	88	70.320	ENSFALG00000012111	POLR1C	66	71.698	Ficedula_albicollis
ENSCVAG00000005684	polr1c	92	68.261	ENSFDAG00000008428	POLR1C	61	71.226	Fukomys_damarensis
ENSCVAG00000005684	polr1c	90	69.643	ENSFHEG00000000262	polr1c	55	71.226	Fundulus_heteroclitus
ENSCVAG00000005684	polr1c	90	82.222	ENSGMOG00000013878	polr1c	66	84.038	Gadus_morhua
ENSCVAG00000005684	polr1c	88	72.146	ENSGALG00000010349	POLR1C	61	73.113	Gallus_gallus
ENSCVAG00000005684	polr1c	85	92.925	ENSGAFG00000010153	polr1c	60	92.925	Gambusia_affinis
ENSCVAG00000005684	polr1c	85	86.321	ENSGACG00000002453	polr1c	60	86.321	Gasterosteus_aculeatus
ENSCVAG00000005684	polr1c	88	70.776	ENSGAGG00000010640	POLR1C	66	71.698	Gopherus_agassizii
ENSCVAG00000005684	polr1c	88	68.950	ENSGGOG00000010903	POLR1C	61	69.811	Gorilla_gorilla
ENSCVAG00000005684	polr1c	88	90.455	ENSHBUG00000017816	polr1c	65	91.509	Haplochromis_burtoni
ENSCVAG00000005684	polr1c	92	67.826	ENSHGLG00000019441	POLR1C	82	70.755	Heterocephalus_glaber_female
ENSCVAG00000005684	polr1c	92	67.826	ENSHGLG00100005970	POLR1C	82	70.755	Heterocephalus_glaber_male
ENSCVAG00000005684	polr1c	89	82.432	ENSHCOG00000002179	polr1c	61	83.491	Hippocampus_comes
ENSCVAG00000005684	polr1c	87	81.651	ENSIPUG00000024464	polr1c	60	82.857	Ictalurus_punctatus
ENSCVAG00000005684	polr1c	88	69.406	ENSSTOG00000010631	POLR1C	61	70.283	Ictidomys_tridecemlineatus
ENSCVAG00000005684	polr1c	88	70.320	ENSJJAG00000023110	Polr1c	61	71.226	Jaculus_jaculus
ENSCVAG00000005684	polr1c	85	90.094	ENSKMAG00000014305	polr1c	59	90.094	Kryptolebias_marmoratus
ENSCVAG00000005684	polr1c	85	90.566	ENSLBEG00000014925	polr1c	60	90.566	Labrus_bergylta
ENSCVAG00000005684	polr1c	88	59.276	ENSLACG00000012567	POLR1C	62	59.624	Latimeria_chalumnae
ENSCVAG00000005684	polr1c	88	76.818	ENSLOCG00000016710	polr1c	58	78.774	Lepisosteus_oculatus
ENSCVAG00000005684	polr1c	87	70.642	ENSLAFG00000026248	POLR1C	70	71.226	Loxodonta_africana
ENSCVAG00000005684	polr1c	88	68.493	ENSMFAG00000046295	POLR1C	61	69.811	Macaca_fascicularis
ENSCVAG00000005684	polr1c	88	68.493	ENSMMUG00000015192	POLR1C	61	69.811	Macaca_mulatta
ENSCVAG00000005684	polr1c	88	68.493	ENSMNEG00000028073	POLR1C	61	69.811	Macaca_nemestrina
ENSCVAG00000005684	polr1c	88	68.950	ENSMLEG00000034818	POLR1C	61	70.283	Mandrillus_leucophaeus
ENSCVAG00000005684	polr1c	89	89.238	ENSMAMG00000008700	polr1c	60	91.038	Mastacembelus_armatus
ENSCVAG00000005684	polr1c	85	91.509	ENSMZEG00005018545	polr1c	60	91.509	Maylandia_zebra
ENSCVAG00000005684	polr1c	88	72.146	ENSMGAG00000011020	POLR1C	74	73.113	Meleagris_gallopavo
ENSCVAG00000005684	polr1c	88	69.406	ENSMAUG00000014329	Polr1c	61	69.811	Mesocricetus_auratus
ENSCVAG00000005684	polr1c	88	67.123	ENSMICG00000005027	POLR1C	61	67.925	Microcebus_murinus
ENSCVAG00000005684	polr1c	88	70.320	ENSMOCG00000017549	Polr1c	61	70.755	Microtus_ochrogaster
ENSCVAG00000005684	polr1c	90	61.607	ENSMMOG00000005380	polr1c	55	63.679	Mola_mola
ENSCVAG00000005684	polr1c	88	70.320	ENSMODG00000018964	POLR1C	73	71.698	Monodelphis_domestica
ENSCVAG00000005684	polr1c	88	67.273	ENSMALG00000011711	polr1c	55	68.396	Monopterus_albus
ENSCVAG00000005684	polr1c	88	69.863	MGP_CAROLIEiJ_G0021662	Polr1c	82	70.283	Mus_caroli
ENSCVAG00000005684	polr1c	88	70.320	ENSMUSG00000067148	Polr1c	82	70.755	Mus_musculus
ENSCVAG00000005684	polr1c	88	70.320	MGP_PahariEiJ_G0020654	Polr1c	82	70.755	Mus_pahari
ENSCVAG00000005684	polr1c	88	70.320	MGP_SPRETEiJ_G0022574	Polr1c	82	70.755	Mus_spretus
ENSCVAG00000005684	polr1c	88	69.406	ENSMPUG00000012916	POLR1C	56	70.283	Mustela_putorius_furo
ENSCVAG00000005684	polr1c	88	69.863	ENSMLUG00000017751	POLR1C	61	70.755	Myotis_lucifugus
ENSCVAG00000005684	polr1c	87	70.183	ENSNGAG00000023487	Polr1c	73	70.755	Nannospalax_galili
ENSCVAG00000005684	polr1c	85	91.981	ENSNBRG00000018742	polr1c	60	91.981	Neolamprologus_brichardi
ENSCVAG00000005684	polr1c	88	68.950	ENSNLEG00000004035	POLR1C	61	69.811	Nomascus_leucogenys
ENSCVAG00000005684	polr1c	88	52.511	ENSMEUG00000006778	POLR1C	61	53.302	Notamacropus_eugenii
ENSCVAG00000005684	polr1c	56	65.957	ENSOPRG00000000145	POLR1C	50	67.164	Ochotona_princeps
ENSCVAG00000005684	polr1c	93	68.103	ENSODEG00000015831	-	61	71.698	Octodon_degus
ENSCVAG00000005684	polr1c	88	69.863	ENSODEG00000017109	-	97	70.755	Octodon_degus
ENSCVAG00000005684	polr1c	85	91.981	ENSONIG00000013133	polr1c	59	91.981	Oreochromis_niloticus
ENSCVAG00000005684	polr1c	88	68.950	ENSOANG00000003043	POLR1C	61	69.811	Ornithorhynchus_anatinus
ENSCVAG00000005684	polr1c	88	67.580	ENSOCUG00000005504	POLR1C	61	68.868	Oryctolagus_cuniculus
ENSCVAG00000005684	polr1c	88	87.215	ENSORLG00000019743	polr1c	61	88.462	Oryzias_latipes
ENSCVAG00000005684	polr1c	82	78.155	ENSORLG00020005555	polr1c	57	79.487	Oryzias_latipes_hni
ENSCVAG00000005684	polr1c	88	87.671	ENSORLG00020006489	POLR1C	62	88.942	Oryzias_latipes_hni
ENSCVAG00000005684	polr1c	88	86.301	ENSORLG00015013322	polr1c	59	87.500	Oryzias_latipes_hsok
ENSCVAG00000005684	polr1c	88	86.818	ENSOMEG00000016527	polr1c	59	89.372	Oryzias_melastigma
ENSCVAG00000005684	polr1c	88	68.950	ENSOGAG00000016318	POLR1C	61	69.811	Otolemur_garnettii
ENSCVAG00000005684	polr1c	88	69.406	ENSOARG00000007503	POLR1C	61	70.755	Ovis_aries
ENSCVAG00000005684	polr1c	88	68.950	ENSPPAG00000043678	POLR1C	61	69.811	Pan_paniscus
ENSCVAG00000005684	polr1c	88	69.406	ENSPPRG00000009760	POLR1C	61	70.283	Panthera_pardus
ENSCVAG00000005684	polr1c	88	69.406	ENSPTIG00000014813	POLR1C	61	70.283	Panthera_tigris_altaica
ENSCVAG00000005684	polr1c	88	68.950	ENSPTRG00000018202	POLR1C	61	69.811	Pan_troglodytes
ENSCVAG00000005684	polr1c	88	68.950	ENSPANG00000009025	POLR1C	61	70.283	Papio_anubis
ENSCVAG00000005684	polr1c	88	80.000	ENSPKIG00000009858	polr1c	61	81.604	Paramormyrops_kingsleyae
ENSCVAG00000005684	polr1c	87	72.477	ENSPSIG00000012580	POLR1C	58	73.113	Pelodiscus_sinensis
ENSCVAG00000005684	polr1c	88	64.545	ENSPMGG00000012121	polr1c	55	65.566	Periophthalmus_magnuspinnatus
ENSCVAG00000005684	polr1c	88	69.406	ENSPEMG00000006970	Polr1c	61	69.811	Peromyscus_maniculatus_bairdii
ENSCVAG00000005684	polr1c	86	67.890	ENSPMAG00000005560	polr1c	60	69.194	Petromyzon_marinus
ENSCVAG00000005684	polr1c	88	70.320	ENSPCIG00000028137	POLR1C	60	71.698	Phascolarctos_cinereus
ENSCVAG00000005684	polr1c	85	94.340	ENSPFOG00000014342	POLR1C	60	94.340	Poecilia_formosa
ENSCVAG00000005684	polr1c	85	94.340	ENSPFOG00000014357	polr1c	59	94.340	Poecilia_formosa
ENSCVAG00000005684	polr1c	85	94.340	ENSPLAG00000004111	polr1c	88	94.340	Poecilia_latipinna
ENSCVAG00000005684	polr1c	85	94.340	ENSPMEG00000011877	-	60	94.340	Poecilia_mexicana
ENSCVAG00000005684	polr1c	85	94.340	ENSPMEG00000008420	polr1c	60	94.340	Poecilia_mexicana
ENSCVAG00000005684	polr1c	90	91.518	ENSPREG00000007985	polr1c	61	94.340	Poecilia_reticulata
ENSCVAG00000005684	polr1c	88	68.493	ENSPPYG00000016645	POLR1C	62	69.340	Pongo_abelii
ENSCVAG00000005684	polr1c	88	67.580	ENSPCOG00000024628	POLR1C	61	68.396	Propithecus_coquereli
ENSCVAG00000005684	polr1c	74	72.581	ENSPVAG00000005689	POLR1C	54	72.581	Pteropus_vampyrus
ENSCVAG00000005684	polr1c	88	90.455	ENSPNYG00000003620	polr1c	60	91.509	Pundamilia_nyererei
ENSCVAG00000005684	polr1c	88	82.727	ENSPNAG00000008443	polr1c	66	84.434	Pygocentrus_nattereri
ENSCVAG00000005684	polr1c	88	69.406	ENSRNOG00000019079	Polr1c	82	69.811	Rattus_norvegicus
ENSCVAG00000005684	polr1c	88	68.493	ENSRBIG00000007155	POLR1C	61	69.340	Rhinopithecus_bieti
ENSCVAG00000005684	polr1c	88	68.950	ENSRROG00000000257	POLR1C	61	69.811	Rhinopithecus_roxellana
ENSCVAG00000005684	polr1c	84	48.571	YPR110C	RPC40	60	49.754	Saccharomyces_cerevisiae
ENSCVAG00000005684	polr1c	88	68.950	ENSSBOG00000025735	POLR1C	56	69.364	Saimiri_boliviensis_boliviensis
ENSCVAG00000005684	polr1c	88	71.689	ENSSHAG00000014456	POLR1C	63	73.113	Sarcophilus_harrisii
ENSCVAG00000005684	polr1c	87	81.193	ENSSFOG00015019860	polr1c	61	82.075	Scleropages_formosus
ENSCVAG00000005684	polr1c	88	87.783	ENSSMAG00000018865	polr1c	62	89.623	Scophthalmus_maximus
ENSCVAG00000005684	polr1c	85	91.981	ENSSDUG00000015745	polr1c	55	91.981	Seriola_dumerili
ENSCVAG00000005684	polr1c	85	91.981	ENSSLDG00000018285	polr1c	55	91.981	Seriola_lalandi_dorsalis
ENSCVAG00000005684	polr1c	88	72.523	ENSSPUG00000011822	POLR1C	60	74.286	Sphenodon_punctatus
ENSCVAG00000005684	polr1c	85	91.038	ENSSPAG00000022369	polr1c	60	91.038	Stegastes_partitus
ENSCVAG00000005684	polr1c	88	68.493	ENSSSCG00000028007	POLR1C	68	69.340	Sus_scrofa
ENSCVAG00000005684	polr1c	88	70.776	ENSTGUG00000009159	POLR1C	63	72.170	Taeniopygia_guttata
ENSCVAG00000005684	polr1c	89	85.202	ENSTRUG00000006264	polr1c	60	87.264	Takifugu_rubripes
ENSCVAG00000005684	polr1c	51	82.031	ENSTNIG00000019804	polr1c	100	82.031	Tetraodon_nigroviridis
ENSCVAG00000005684	polr1c	71	71.910	ENSTBEG00000002254	POLR1C	100	71.910	Tupaia_belangeri
ENSCVAG00000005684	polr1c	88	68.037	ENSTTRG00000006344	POLR1C	61	68.868	Tursiops_truncatus
ENSCVAG00000005684	polr1c	88	69.863	ENSUAMG00000025602	POLR1C	61	70.755	Ursus_americanus
ENSCVAG00000005684	polr1c	88	69.863	ENSUMAG00000005938	POLR1C	61	70.755	Ursus_maritimus
ENSCVAG00000005684	polr1c	88	66.210	ENSVVUG00000028922	POLR1C	60	67.453	Vulpes_vulpes
ENSCVAG00000005684	polr1c	90	66.372	ENSXETG00000010882	polr1c	61	67.606	Xenopus_tropicalis
ENSCVAG00000005684	polr1c	92	89.130	ENSXCOG00000014185	polr1c	66	89.130	Xiphophorus_couchianus
ENSCVAG00000005684	polr1c	85	93.396	ENSXMAG00000015076	polr1c	60	93.396	Xiphophorus_maculatus