EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005731 (Gene tree)
Gene ID: 107093787
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 15684 bases
Position: chrKL652519.1:201932-217615
Accession: 107093787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004429	RRM_1	PF00076.22	1.1e-24	1	1
ENSCVAP00000004440	RRM_1	PF00076.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008355	-	1717	XM_015389074	ENSCVAP00000004429	486 (aa)	XP_015244560	UPI000742B2C4
ENSCVAT00000008339	-	1777	XM_015389066	ENSCVAP00000004440	506 (aa)	XP_015244552	UPI000742A19D

Gene Model

Click here to download ENSCVAG00000005731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005731	cstf2	96	60.732	ENSG00000101811	CSTF2	83	91.398	Homo_sapiens
ENSCVAG00000005731	cstf2	96	88.025	ENSAPOG00000005630	cstf2	96	88.211	Acanthochromis_polyacanthus
ENSCVAG00000005731	cstf2	96	59.136	ENSAMEG00000002082	CSTF2	84	83.402	Ailuropoda_melanoleuca
ENSCVAG00000005731	cstf2	96	82.600	ENSACIG00000012852	cstf2	96	84.696	Amphilophus_citrinellus
ENSCVAG00000005731	cstf2	100	87.045	ENSAOCG00000020905	cstf2	96	87.789	Amphiprion_ocellaris
ENSCVAG00000005731	cstf2	100	87.045	ENSAPEG00000006526	cstf2	96	88.000	Amphiprion_percula
ENSCVAG00000005731	cstf2	100	86.558	ENSATEG00000018186	cstf2	96	86.864	Anabas_testudineus
ENSCVAG00000005731	cstf2	94	59.455	ENSAPLG00000007255	CSTF2	82	84.388	Anas_platyrhynchos
ENSCVAG00000005731	cstf2	96	75.986	ENSANAG00000022342	CSTF2	80	82.988	Aotus_nancymaae
ENSCVAG00000005731	cstf2	100	87.524	ENSACLG00000000779	cstf2	93	87.764	Astatotilapia_calliptera
ENSCVAG00000005731	cstf2	66	100.000	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSCVAG00000005731	cstf2	96	61.257	ENSBTAG00000003547	CSTF2	87	82.988	Bos_taurus
ENSCVAG00000005731	cstf2	96	61.818	ENSCJAG00000004422	CSTF2	99	60.870	Callithrix_jacchus
ENSCVAG00000005731	cstf2	96	60.727	ENSCAFG00000017551	CSTF2	99	62.019	Canis_familiaris
ENSCVAG00000005731	cstf2	96	77.491	ENSCAFG00020007619	CSTF2	84	81.557	Canis_lupus_dingo
ENSCVAG00000005731	cstf2	96	61.257	ENSCHIG00000016994	CSTF2	87	82.988	Capra_hircus
ENSCVAG00000005731	cstf2	96	60.570	ENSTSYG00000006529	CSTF2	87	82.988	Carlito_syrichta
ENSCVAG00000005731	cstf2	97	61.026	ENSCPOG00000015255	CSTF2	84	93.464	Cavia_porcellus
ENSCVAG00000005731	cstf2	96	62.100	ENSCCAG00000032975	CSTF2	99	61.939	Cebus_capucinus
ENSCVAG00000005731	cstf2	96	62.903	ENSCATG00000022835	CSTF2	87	82.988	Cercocebus_atys
ENSCVAG00000005731	cstf2	96	61.658	ENSCLAG00000001904	CSTF2	85	91.667	Chinchilla_lanigera
ENSCVAG00000005731	cstf2	97	60.066	ENSCSAG00000010360	CSTF2	84	82.988	Chlorocebus_sabaeus
ENSCVAG00000005731	cstf2	97	70.139	ENSCPBG00000014293	CSTF2	92	69.575	Chrysemys_picta_bellii
ENSCVAG00000005731	cstf2	97	61.905	ENSCANG00000030612	CSTF2	87	82.988	Colobus_angolensis_palliatus
ENSCVAG00000005731	cstf2	96	60.104	ENSCGRG00001023023	Cstf2	87	82.500	Cricetulus_griseus_chok1gshd
ENSCVAG00000005731	cstf2	96	62.254	ENSCGRG00000003897	Cstf2	86	82.083	Cricetulus_griseus_crigri
ENSCVAG00000005731	cstf2	66	100.000	ENSDARG00000090788	cstf2	95	100.000	Danio_rerio
ENSCVAG00000005731	cstf2	96	61.073	ENSDORG00000007195	Cstf2	83	93.377	Dipodomys_ordii
ENSCVAG00000005731	cstf2	74	84.483	ENSETEG00000004931	CSTF2	64	84.483	Echinops_telfairi
ENSCVAG00000005731	cstf2	97	58.746	ENSEASG00005001216	CSTF2	84	81.557	Equus_asinus_asinus
ENSCVAG00000005731	cstf2	97	58.746	ENSECAG00000009325	CSTF2	87	81.557	Equus_caballus
ENSCVAG00000005731	cstf2	96	60.381	ENSFCAG00000007000	CSTF2	87	82.988	Felis_catus
ENSCVAG00000005731	cstf2	89	57.268	ENSFALG00000003859	CSTF2	84	82.775	Ficedula_albicollis
ENSCVAG00000005731	cstf2	97	74.744	ENSFDAG00000002416	CSTF2	80	82.377	Fukomys_damarensis
ENSCVAG00000005731	cstf2	96	92.972	ENSFHEG00000017065	cstf2	93	93.173	Fundulus_heteroclitus
ENSCVAG00000005731	cstf2	95	73.585	ENSGMOG00000005145	cstf2	99	74.686	Gadus_morhua
ENSCVAG00000005731	cstf2	97	62.543	ENSGALG00000006760	CSTF2	87	85.366	Gallus_gallus
ENSCVAG00000005731	cstf2	96	89.375	ENSGAFG00000020027	cstf2	96	89.792	Gambusia_affinis
ENSCVAG00000005731	cstf2	97	77.649	ENSGACG00000017326	cstf2	98	79.884	Gasterosteus_aculeatus
ENSCVAG00000005731	cstf2	97	60.196	ENSGAGG00000006037	CSTF2	87	84.274	Gopherus_agassizii
ENSCVAG00000005731	cstf2	96	62.278	ENSGGOG00000022267	CSTF2	87	82.988	Gorilla_gorilla
ENSCVAG00000005731	cstf2	100	87.879	ENSHBUG00000016183	cstf2	93	87.815	Haplochromis_burtoni
ENSCVAG00000005731	cstf2	96	55.245	ENSHGLG00000013455	-	99	54.912	Heterocephalus_glaber_female
ENSCVAG00000005731	cstf2	96	61.856	ENSHGLG00000000659	-	86	90.123	Heterocephalus_glaber_female
ENSCVAG00000005731	cstf2	96	61.856	ENSHGLG00100001130	-	86	90.123	Heterocephalus_glaber_male
ENSCVAG00000005731	cstf2	96	55.245	ENSHGLG00100015391	-	99	54.912	Heterocephalus_glaber_male
ENSCVAG00000005731	cstf2	96	82.255	ENSHCOG00000005157	cstf2	97	82.636	Hippocampus_comes
ENSCVAG00000005731	cstf2	97	60.622	ENSSTOG00000023445	CSTF2	85	91.667	Ictidomys_tridecemlineatus
ENSCVAG00000005731	cstf2	96	59.689	ENSJJAG00000020507	Cstf2	85	91.667	Jaculus_jaculus
ENSCVAG00000005731	cstf2	100	89.613	ENSKMAG00000001068	cstf2	96	91.314	Kryptolebias_marmoratus
ENSCVAG00000005731	cstf2	68	93.671	ENSLBEG00000028720	cstf2	93	96.610	Labrus_bergylta
ENSCVAG00000005731	cstf2	97	60.299	ENSLACG00000015927	CSTF2	99	58.136	Latimeria_chalumnae
ENSCVAG00000005731	cstf2	96	85.294	ENSLOCG00000015300	cstf2	81	85.294	Lepisosteus_oculatus
ENSCVAG00000005731	cstf2	96	60.241	ENSLAFG00000000474	CSTF2	87	83.402	Loxodonta_africana
ENSCVAG00000005731	cstf2	97	61.905	ENSMFAG00000043888	CSTF2	87	82.988	Macaca_fascicularis
ENSCVAG00000005731	cstf2	97	61.905	ENSMMUG00000013008	CSTF2	86	81.034	Macaca_mulatta
ENSCVAG00000005731	cstf2	97	61.905	ENSMNEG00000041824	CSTF2	87	82.988	Macaca_nemestrina
ENSCVAG00000005731	cstf2	97	61.905	ENSMLEG00000036870	CSTF2	87	82.988	Mandrillus_leucophaeus
ENSCVAG00000005731	cstf2	94	87.397	ENSMAMG00000020364	cstf2	96	86.853	Mastacembelus_armatus
ENSCVAG00000005731	cstf2	100	87.830	ENSMZEG00005007200	cstf2	96	87.764	Maylandia_zebra
ENSCVAG00000005731	cstf2	86	68.293	ENSMGAG00000004139	CSTF2	100	60.465	Meleagris_gallopavo
ENSCVAG00000005731	cstf2	96	59.585	ENSMAUG00000000965	Cstf2	90	65.385	Mesocricetus_auratus
ENSCVAG00000005731	cstf2	96	62.544	ENSMICG00000014121	CSTF2	87	84.232	Microcebus_murinus
ENSCVAG00000005731	cstf2	96	60.139	ENSMOCG00000008081	Cstf2	99	60.908	Microtus_ochrogaster
ENSCVAG00000005731	cstf2	100	73.279	ENSMMOG00000000538	cstf2	96	74.105	Mola_mola
ENSCVAG00000005731	cstf2	97	61.149	ENSMODG00000011785	CSTF2	99	59.898	Monodelphis_domestica
ENSCVAG00000005731	cstf2	95	77.737	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.903	Mus_caroli
ENSCVAG00000005731	cstf2	96	60.137	ENSMUSG00000031256	Cstf2	84	92.903	Mus_musculus
ENSCVAG00000005731	cstf2	95	77.737	MGP_PahariEiJ_G0031923	Cstf2	80	84.232	Mus_pahari
ENSCVAG00000005731	cstf2	95	77.737	MGP_SPRETEiJ_G0034548	Cstf2	84	92.903	Mus_spretus
ENSCVAG00000005731	cstf2	96	77.122	ENSMPUG00000002339	CSTF2	80	82.988	Mustela_putorius_furo
ENSCVAG00000005731	cstf2	93	80.620	ENSMLUG00000004598	CSTF2	78	83.607	Myotis_lucifugus
ENSCVAG00000005731	cstf2	96	59.897	ENSNGAG00000021985	Cstf2	99	61.179	Nannospalax_galili
ENSCVAG00000005731	cstf2	92	78.197	ENSNBRG00000021694	cstf2	100	79.036	Neolamprologus_brichardi
ENSCVAG00000005731	cstf2	96	62.278	ENSNLEG00000007510	CSTF2	87	82.988	Nomascus_leucogenys
ENSCVAG00000005731	cstf2	97	61.786	ENSMEUG00000011186	-	99	63.309	Notamacropus_eugenii
ENSCVAG00000005731	cstf2	97	61.691	ENSMEUG00000007875	-	99	62.230	Notamacropus_eugenii
ENSCVAG00000005731	cstf2	87	61.078	ENSMEUG00000014025	-	100	61.905	Notamacropus_eugenii
ENSCVAG00000005731	cstf2	85	73.709	ENSOPRG00000003106	CSTF2	85	73.148	Ochotona_princeps
ENSCVAG00000005731	cstf2	96	61.379	ENSODEG00000002059	CSTF2	87	82.377	Octodon_degus
ENSCVAG00000005731	cstf2	77	90.244	ENSONIG00000002631	cstf2	90	95.652	Oreochromis_niloticus
ENSCVAG00000005731	cstf2	85	82.692	ENSOANG00000004208	CSTF2	72	84.483	Ornithorhynchus_anatinus
ENSCVAG00000005731	cstf2	96	59.619	ENSOCUG00000010468	CSTF2	87	83.817	Oryctolagus_cuniculus
ENSCVAG00000005731	cstf2	96	85.474	ENSORLG00000001380	cstf2	96	86.316	Oryzias_latipes
ENSCVAG00000005731	cstf2	96	85.474	ENSORLG00020021917	cstf2	96	86.345	Oryzias_latipes_hni
ENSCVAG00000005731	cstf2	96	85.474	ENSORLG00015011996	cstf2	96	86.316	Oryzias_latipes_hsok
ENSCVAG00000005731	cstf2	100	85.484	ENSOMEG00000015507	cstf2	96	87.631	Oryzias_melastigma
ENSCVAG00000005731	cstf2	95	77.695	ENSOGAG00000011192	CSTF2	80	82.500	Otolemur_garnettii
ENSCVAG00000005731	cstf2	96	61.257	ENSOARG00000001022	CSTF2	87	82.988	Ovis_aries
ENSCVAG00000005731	cstf2	96	62.278	ENSPPAG00000031804	CSTF2	87	82.988	Pan_paniscus
ENSCVAG00000005731	cstf2	96	60.381	ENSPPRG00000022492	CSTF2	87	82.988	Panthera_pardus
ENSCVAG00000005731	cstf2	96	60.035	ENSPTIG00000009922	CSTF2	87	82.158	Panthera_tigris_altaica
ENSCVAG00000005731	cstf2	96	62.278	ENSPTRG00000022090	CSTF2	87	82.988	Pan_troglodytes
ENSCVAG00000005731	cstf2	96	75.986	ENSPANG00000002303	CSTF2	87	82.988	Papio_anubis
ENSCVAG00000005731	cstf2	100	72.534	ENSPKIG00000005033	cstf2	93	74.897	Paramormyrops_kingsleyae
ENSCVAG00000005731	cstf2	96	85.474	ENSPMGG00000006534	cstf2	96	86.316	Periophthalmus_magnuspinnatus
ENSCVAG00000005731	cstf2	96	59.450	ENSPEMG00000019415	Cstf2	87	83.682	Peromyscus_maniculatus_bairdii
ENSCVAG00000005731	cstf2	97	59.022	ENSPCIG00000002989	CSTF2	99	59.796	Phascolarctos_cinereus
ENSCVAG00000005731	cstf2	96	88.776	ENSPLAG00000011176	cstf2	96	89.184	Poecilia_latipinna
ENSCVAG00000005731	cstf2	96	87.959	ENSPMEG00000017743	cstf2	96	88.163	Poecilia_mexicana
ENSCVAG00000005731	cstf2	66	93.114	ENSPREG00000011481	cstf2	97	83.148	Poecilia_reticulata
ENSCVAG00000005731	cstf2	96	60.399	ENSPPYG00000020541	CSTF2	84	82.988	Pongo_abelii
ENSCVAG00000005731	cstf2	97	62.014	ENSPCOG00000027744	CSTF2	87	82.988	Propithecus_coquereli
ENSCVAG00000005731	cstf2	93	47.780	ENSPVAG00000008342	CSTF2	90	56.332	Pteropus_vampyrus
ENSCVAG00000005731	cstf2	58	90.217	ENSPNYG00000010852	cstf2	94	93.151	Pundamilia_nyererei
ENSCVAG00000005731	cstf2	96	60.832	ENSRNOG00000048025	Cstf2	80	84.232	Rattus_norvegicus
ENSCVAG00000005731	cstf2	97	62.057	ENSRBIG00000030745	CSTF2	87	82.988	Rhinopithecus_bieti
ENSCVAG00000005731	cstf2	97	61.905	ENSRROG00000045042	CSTF2	87	82.988	Rhinopithecus_roxellana
ENSCVAG00000005731	cstf2	95	77.007	ENSSBOG00000021649	CSTF2	80	82.988	Saimiri_boliviensis_boliviensis
ENSCVAG00000005731	cstf2	86	82.692	ENSSHAG00000003681	CSTF2	77	86.099	Sarcophilus_harrisii
ENSCVAG00000005731	cstf2	96	73.425	ENSSFOG00015006348	cstf2	97	73.870	Scleropages_formosus
ENSCVAG00000005731	cstf2	100	84.825	ENSSMAG00000013463	cstf2	96	86.526	Scophthalmus_maximus
ENSCVAG00000005731	cstf2	97	62.235	ENSSPUG00000005288	-	52	86.777	Sphenodon_punctatus
ENSCVAG00000005731	cstf2	96	60.896	ENSSSCG00000012486	CSTF2	87	81.557	Sus_scrofa
ENSCVAG00000005731	cstf2	97	60.434	ENSTGUG00000002253	CSTF2	87	84.274	Taeniopygia_guttata
ENSCVAG00000005731	cstf2	97	80.545	ENSTNIG00000016860	cstf2	99	81.460	Tetraodon_nigroviridis
ENSCVAG00000005731	cstf2	96	59.862	ENSTTRG00000013556	CSTF2	87	82.988	Tursiops_truncatus
ENSCVAG00000005731	cstf2	96	77.122	ENSUAMG00000026605	CSTF2	87	82.988	Ursus_americanus
ENSCVAG00000005731	cstf2	97	75.725	ENSUMAG00000012417	CSTF2	86	82.573	Ursus_maritimus
ENSCVAG00000005731	cstf2	76	70.030	ENSVPAG00000006466	CSTF2	70	70.501	Vicugna_pacos
ENSCVAG00000005731	cstf2	96	60.554	ENSVVUG00000004717	CSTF2	99	62.712	Vulpes_vulpes
ENSCVAG00000005731	cstf2	88	77.941	ENSXETG00000009642	cstf2	86	77.941	Xenopus_tropicalis
ENSCVAG00000005731	cstf2	96	74.038	ENSXCOG00000016436	cstf2	98	98.824	Xiphophorus_couchianus
ENSCVAG00000005731	cstf2	66	92.216	ENSXMAG00000013524	cstf2	97	84.270	Xiphophorus_maculatus